RNA–Protein interactions for RNA: ENST00000561276.5

LRRC28-221, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 967 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-221ENST00000561276 SLFN12LQ6IEE8 588 aa11.25□□□□□ -0.61
LRRC28-221ENST00000561276 MPZL3Q6UWV2 235 aa11.25□□□□□ -0.61
LRRC28-221ENST00000561276 TMCO2Q7Z6W1 182 aaPredicted RBP11.25□□□□□ -0.61
LRRC28-221ENST00000561276 TDHQ8IZJ6 230 aa11.25□□□□□ -0.61
LRRC28-221ENST00000561276 GUF1Q8N442 669 aaKnown RBP11.25□□□□□ -0.61
LRRC28-221ENST00000561276 TRIML1Q8N9V2 468 aa11.25□□□□□ -0.61
LRRC28-221ENST00000561276 SMG8Q8ND04 991 aaKnown RBP11.25□□□□□ -0.61
LRRC28-221ENST00000561276 CCDC51Q96ER9 411 aa11.25□□□□□ -0.61
LRRC28-221ENST00000561276 RNPC3Q96LT9 517 aaKnown RBP11.25□□□□□ -0.61
LRRC28-221ENST00000561276 TRIM6Q9C030 488 aaPredicted RBP11.25□□□□□ -0.61
LRRC28-221ENST00000561276 HAPLN2Q9GZV7 340 aa11.25□□□□□ -0.61
LRRC28-221ENST00000561276 GBP3Q9H0R5 595 aa11.25□□□□□ -0.61
LRRC28-221ENST00000561276 ELAC1Q9H777 363 aaKnown RBP11.25□□□□□ -0.61
LRRC28-221ENST00000561276 LRFN2Q9ULH4 789 aa11.25□□□□□ -0.61
LRRC28-221ENST00000561276 IPPQ9Y573 584 aa11.25□□□□□ -0.61
LRRC28-221ENST00000561276 STYXL1Q9Y6J8 313 aa11.25□□□□□ -0.61
LRRC28-221ENST00000561276 TDRD15B5MCY1 1934 aaKnown RBP11.25□□□□□ -0.61
LRRC28-221ENST00000561276 A0A0B4J269 797 aa11.24□□□□□ -0.61
LRRC28-221ENST00000561276 STAG3L1P0CL83 205 aa11.24□□□□□ -0.61
LRRC28-221ENST00000561276 MCF2P10911 925 aa11.24□□□□□ -0.61
LRRC28-221ENST00000561276 ADSSP30520 456 aa11.24□□□□□ -0.61
LRRC28-221ENST00000561276 RAB27AP51159 221 aa11.24□□□□□ -0.61
LRRC28-221ENST00000561276 OSTNP61366 133 aa11.24□□□□□ -0.61
LRRC28-221ENST00000561276 ZNF568Q3ZCX4 644 aa11.24□□□□□ -0.61
LRRC28-221ENST00000561276 COBLL1Q53SF7 1204 aa11.24□□□□□ -0.61
LRRC28-221ENST00000561276 FAM117BQ6P1L5 589 aa11.24□□□□□ -0.61
LRRC28-221ENST00000561276 RBM43Q6ZSC3 357 aaKnown RBP11.24□□□□□ -0.61
LRRC28-221ENST00000561276 APBB1IPQ7Z5R6 666 aaPredicted RBP11.24□□□□□ -0.61
LRRC28-221ENST00000561276 MRPL10Q7Z7H8 261 aaKnown RBP11.24□□□□□ -0.61
LRRC28-221ENST00000561276 ZNF598Q86UK7 904 aaKnown RBP11.24□□□□□ -0.61
LRRC28-221ENST00000561276 THNSL1Q8IYQ7 743 aa11.24□□□□□ -0.61
LRRC28-221ENST00000561276 RNF169Q8NCN4 708 aa11.24□□□□□ -0.61
LRRC28-221ENST00000561276 PHOSPHO2Q8TCD6 241 aa11.24□□□□□ -0.61
LRRC28-221ENST00000561276 POMGNT1Q8WZA1 660 aa11.24□□□□□ -0.61
LRRC28-221ENST00000561276 LPPQ93052 612 aa11.24□□□□□ -0.61
LRRC28-221ENST00000561276 SYAP1Q96A49 352 aaPredicted RBP11.24□□□□□ -0.61
LRRC28-221ENST00000561276 MSTO1Q9BUK6 570 aa11.24□□□□□ -0.61
LRRC28-221ENST00000561276 CDT1Q9H211 546 aa11.24□□□□□ -0.61
LRRC28-221ENST00000561276 PRO3102Q9H379 93 aa11.24□□□□□ -0.61
LRRC28-221ENST00000561276 TMEM161AQ9NX61 479 aa11.24□□□□□ -0.61
LRRC28-221ENST00000561276 ANKFY1Q9P2R3 1169 aa11.24□□□□□ -0.61
LRRC28-221ENST00000561276 HES2Q9Y543 173 aa11.24□□□□□ -0.61
LRRC28-221ENST00000561276 UBE4BO95155 1302 aa11.24□□□□□ -0.61
LRRC28-221ENST00000561276 ZMYM2Q9UBW7 1377 aa11.24□□□□□ -0.61
LRRC28-221ENST00000561276 CITO14578 2027 aa11.23□□□□□ -0.61
LRRC28-221ENST00000561276 MEIS3P2A8K0S8 358 aa11.23□□□□□ -0.61
LRRC28-221ENST00000561276 PPP1R3GB7ZBB8 358 aa11.23□□□□□ -0.61
LRRC28-221ENST00000561276 PDXKO00764 312 aa11.23□□□□□ -0.61
LRRC28-221ENST00000561276 CLIC2O15247 247 aa11.23□□□□□ -0.61
LRRC28-221ENST00000561276 OGTO15294 1046 aa11.23□□□□□ -0.61
LRRC28-221ENST00000561276 HARSP12081 509 aaKnown RBP11.23□□□□□ -0.61
LRRC28-221ENST00000561276 ITGA4P13612 1032 aa11.23□□□□□ -0.61
LRRC28-221ENST00000561276 ATP2A2P16615 1042 aaKnown RBP11.23□□□□□ -0.61
LRRC28-221ENST00000561276 ATF7P17544 494 aaPredicted RBP11.23□□□□□ -0.61
LRRC28-221ENST00000561276 GARTP22102 1010 aa11.23□□□□□ -0.61
LRRC28-221ENST00000561276 AKAP5P24588 427 aa11.23□□□□□ -0.61
LRRC28-221ENST00000561276 NLRP12P59046 1061 aa11.23□□□□□ -0.61
LRRC28-221ENST00000561276 SNRPFP62306 86 aaKnown RBP11.23□□□□□ -0.61
LRRC28-221ENST00000561276 MCL1Q07820 350 aa11.23□□□□□ -0.61
LRRC28-221ENST00000561276 NOLC1Q14978 699 aaKnown RBP eCLIP11.23□□□□□ -0.61
LRRC28-221ENST00000561276 DCAF4L1Q3SXM0 396 aa11.23□□□□□ -0.61
LRRC28-221ENST00000561276 SEZ6Q53EL9 994 aa11.23□□□□□ -0.61
LRRC28-221ENST00000561276 ARMCX5Q6P1M9 558 aa11.23□□□□□ -0.61
LRRC28-221ENST00000561276 SASS6Q6UVJ0 657 aa11.23□□□□□ -0.61
LRRC28-221ENST00000561276 AGMOQ6ZNB7 445 aa11.23□□□□□ -0.61
LRRC28-221ENST00000561276 NPAS4Q8IUM7 802 aa11.23□□□□□ -0.61
LRRC28-221ENST00000561276 ADSSL1Q8N142 457 aa11.23□□□□□ -0.61
LRRC28-221ENST00000561276 CEP120Q8N960 986 aa11.23□□□□□ -0.61
LRRC28-221ENST00000561276 SPOCK2Q92563 424 aa11.23□□□□□ -0.61
LRRC28-221ENST00000561276 PGBD4Q96DM1 585 aa11.23□□□□□ -0.61
LRRC28-221ENST00000561276 SLC9A7Q96T83 725 aa11.23□□□□□ -0.61
LRRC28-221ENST00000561276 ZBED2Q9BTP6 218 aa11.23□□□□□ -0.61
LRRC28-221ENST00000561276 APOL6Q9BWW8 343 aa11.23□□□□□ -0.61
LRRC28-221ENST00000561276 KCTD10Q9H3F6 313 aa11.23□□□□□ -0.61
LRRC28-221ENST00000561276 NXF3Q9H4D5 531 aaKnown RBP11.23□□□□□ -0.61
LRRC28-221ENST00000561276 PCIF1Q9H4Z3 704 aa11.23□□□□□ -0.61
LRRC28-221ENST00000561276 TYW1Q9NV66 732 aaKnown RBP11.23□□□□□ -0.61
LRRC28-221ENST00000561276 SNTG2Q9NY99 539 aa11.23□□□□□ -0.61
LRRC28-221ENST00000561276 CGNQ9P2M7 1197 aaKnown RBP11.23□□□□□ -0.61
LRRC28-221ENST00000561276 PARP2Q9UGN5 583 aa11.23□□□□□ -0.61
LRRC28-221ENST00000561276 AGO2Q9UKV8 859 aaKnown RBP11.23□□□□□ -0.61
LRRC28-221ENST00000561276 COLQQ9Y215 455 aaPredicted RBP11.23□□□□□ -0.61
LRRC28-221ENST00000561276 ANK1P16157 1881 aa11.23□□□□□ -0.61
LRRC28-221ENST00000561276 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.22□□□□□ -0.61
LRRC28-221ENST00000561276 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.22□□□□□ -0.61
LRRC28-221ENST00000561276 GRXCR1A8MXD5 290 aa11.22□□□□□ -0.61
LRRC28-221ENST00000561276 DGKIO75912 1065 aa11.22□□□□□ -0.61
LRRC28-221ENST00000561276 LETM1O95202 739 aaPredicted RBP11.22□□□□□ -0.61
LRRC28-221ENST00000561276 LDHAP00338 332 aaKnown RBP11.22□□□□□ -0.61
LRRC28-221ENST00000561276 PPP1R2P41236 205 aa11.22□□□□□ -0.61
LRRC28-221ENST00000561276 GRM5P41594 1212 aa11.22□□□□□ -0.61
LRRC28-221ENST00000561276 ACOT2P49753 483 aa11.22□□□□□ -0.61
LRRC28-221ENST00000561276 STIM1Q13586 685 aa11.22□□□□□ -0.61
LRRC28-221ENST00000561276 PRPF38BQ5VTL8 546 aaKnown RBP11.22□□□□□ -0.61
LRRC28-221ENST00000561276 CENPPQ6IPU0 288 aa11.22□□□□□ -0.61
LRRC28-221ENST00000561276 HS2ST1Q7LGA3 356 aa11.22□□□□□ -0.61
LRRC28-221ENST00000561276 HERC6Q8IVU3 1022 aa11.22□□□□□ -0.61
LRRC28-221ENST00000561276 TMEM192Q8IY95 271 aa11.22□□□□□ -0.61
LRRC28-221ENST00000561276 HACE1Q8IYU2 909 aa11.22□□□□□ -0.61
LRRC28-221ENST00000561276 MLKLQ8NB16 471 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms