RNA–Protein interactions for RNA: ENST00000561187.1

SNRPA1-215, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-215ENST00000561187 HACE1Q8IYU2 909 aa29.98■■■□□ 2.39
SNRPA1-215ENST00000561187 FAM86C1Q9NVL1 165 aa29.98■■■□□ 2.39
SNRPA1-215ENST00000561187 USP20Q9Y2K6 914 aa29.98■■■□□ 2.39
SNRPA1-215ENST00000561187 TEX28O15482 410 aa29.97■■■□□ 2.39
SNRPA1-215ENST00000561187 OR52Z1P0C646 297 aa29.97■■■□□ 2.39
SNRPA1-215ENST00000561187 POU5F1BQ06416 359 aa29.97■■■□□ 2.39
SNRPA1-215ENST00000561187 NBR1Q14596 966 aa29.97■■■□□ 2.39
SNRPA1-215ENST00000561187 SLC27A1Q6PCB7 646 aa29.97■■■□□ 2.39
SNRPA1-215ENST00000561187 GPR149Q86SP6 731 aa29.97■■■□□ 2.39
SNRPA1-215ENST00000561187 BSNDQ8WZ55 320 aa29.97■■■□□ 2.39
SNRPA1-215ENST00000561187 RPS6KC1Q96S38 1066 aa29.97■■■□□ 2.39
SNRPA1-215ENST00000561187 TUFT1Q9NNX1 390 aa29.97■■■□□ 2.39
SNRPA1-215ENST00000561187 LIMCH1Q9UPQ0 1083 aa29.97■■■□□ 2.39
SNRPA1-215ENST00000561187 GIT1Q9Y2X7 761 aa29.97■■■□□ 2.39
SNRPA1-215ENST00000561187 TTLL13PA6NNM8 815 aa29.96■■■□□ 2.39
SNRPA1-215ENST00000561187 INPPL1O15357 1258 aa29.96■■■□□ 2.39
SNRPA1-215ENST00000561187 SPATA31D3P0C874 917 aa29.96■■■□□ 2.39
SNRPA1-215ENST00000561187 PTPN5P54829 565 aa29.96■■■□□ 2.39
SNRPA1-215ENST00000561187 TCF15Q12870 199 aa29.96■■■□□ 2.39
SNRPA1-215ENST00000561187 SPATA31D4Q6ZUB0 917 aa29.96■■■□□ 2.39
SNRPA1-215ENST00000561187 NFKBIZQ9BYH8 718 aa29.96■■■□□ 2.39
SNRPA1-215ENST00000561187 POLD4Q9HCU8 107 aa29.96■■■□□ 2.39
SNRPA1-215ENST00000561187 STK39Q9UEW8 545 aa29.96■■■□□ 2.39
SNRPA1-215ENST00000561187 ADH1AP07327 375 aa29.95■■■□□ 2.39
SNRPA1-215ENST00000561187 AVPR2P30518 371 aa29.95■■■□□ 2.39
SNRPA1-215ENST00000561187 GNL2Q13823 731 aaKnown RBP29.95■■■□□ 2.39
SNRPA1-215ENST00000561187 ZBTB8OSQ8IWT0 167 aa29.95■■■□□ 2.39
SNRPA1-215ENST00000561187 GSTCDQ8NEC7 633 aa29.95■■■□□ 2.39
SNRPA1-215ENST00000561187 HASPINQ8TF76 798 aa29.95■■■□□ 2.39
SNRPA1-215ENST00000561187 ARHGEF35A5YM69 484 aa29.94■■■□□ 2.38
SNRPA1-215ENST00000561187 NR1I2O75469 434 aa29.94■■■□□ 2.38
SNRPA1-215ENST00000561187 GLUD1P00367 558 aa29.94■■■□□ 2.38
SNRPA1-215ENST00000561187 FUT10Q6P4F1 479 aa29.94■■■□□ 2.38
SNRPA1-215ENST00000561187 PADI6Q6TGC4 694 aa29.94■■■□□ 2.38
SNRPA1-215ENST00000561187 ZDHHC14Q8IZN3 488 aa29.94■■■□□ 2.38
SNRPA1-215ENST00000561187 MCPH1Q8NEM0 835 aa29.94■■■□□ 2.38
SNRPA1-215ENST00000561187 KIFC3Q9BVG8 833 aa29.94■■■□□ 2.38
SNRPA1-215ENST00000561187 GPR62Q9BZJ7 368 aa29.94■■■□□ 2.38
SNRPA1-215ENST00000561187 A0A1B0GUA9 196 aa29.93■■■□□ 2.38
SNRPA1-215ENST00000561187 RFPL2O75678 378 aa29.93■■■□□ 2.38
SNRPA1-215ENST00000561187 RPL17P18621 184 aaKnown RBP29.93■■■□□ 2.38
SNRPA1-215ENST00000561187 TTC38Q5R3I4 469 aa29.93■■■□□ 2.38
SNRPA1-215ENST00000561187 PALB2Q86YC2 1186 aa29.93■■■□□ 2.38
SNRPA1-215ENST00000561187 UBALD2Q8IYN6 164 aa29.93■■■□□ 2.38
SNRPA1-215ENST00000561187 RNF168Q8IYW5 571 aaPredicted RBP29.93■■■□□ 2.38
SNRPA1-215ENST00000561187 ERMNQ8TAM6 284 aa29.93■■■□□ 2.38
SNRPA1-215ENST00000561187 NACC1Q96RE7 527 aa29.93■■■□□ 2.38
SNRPA1-215ENST00000561187 PAAF1Q9BRP4 392 aa29.93■■■□□ 2.38
SNRPA1-215ENST00000561187 COLEC11Q9BWP8 271 aa29.93■■■□□ 2.38
SNRPA1-215ENST00000561187 PRMT7Q9NVM4 692 aaPredicted RBP29.93■■■□□ 2.38
SNRPA1-215ENST00000561187 CASTOR2A6NHX0 329 aa29.92■■■□□ 2.38
SNRPA1-215ENST00000561187 XRCC6P12956 609 aaKnown RBP eCLIP29.92■■■□□ 2.38
SNRPA1-215ENST00000561187 GRIK3Q13003 919 aa29.92■■■□□ 2.38
SNRPA1-215ENST00000561187 KIAA0319Q5VV43 1072 aa29.92■■■□□ 2.38
SNRPA1-215ENST00000561187 CDCA2Q69YH5 1023 aaPredicted RBP29.92■■■□□ 2.38
SNRPA1-215ENST00000561187 ACSF2Q96CM8 615 aaPredicted RBP29.92■■■□□ 2.38
SNRPA1-215ENST00000561187 POLR3CQ9BUI4 534 aaPredicted RBP29.92■■■□□ 2.38
SNRPA1-215ENST00000561187 PDZD7Q9H5P4 517 aa29.92■■■□□ 2.38
SNRPA1-215ENST00000561187 USTQ9Y2C2 406 aa29.92■■■□□ 2.38
SNRPA1-215ENST00000561187 CACNA1HO95180 2353 aa29.92■■■□□ 2.38
SNRPA1-215ENST00000561187 EDN1P05305 212 aa29.91■■■□□ 2.38
SNRPA1-215ENST00000561187 DSG1Q02413 1049 aa29.91■■■□□ 2.38
SNRPA1-215ENST00000561187 PPP4R3CPQ6ZMV5 832 aa29.91■■■□□ 2.38
SNRPA1-215ENST00000561187 PLCD3Q8N3E9 789 aa29.91■■■□□ 2.38
SNRPA1-215ENST00000561187 FAM184AQ8NB25 1140 aa29.91■■■□□ 2.38
SNRPA1-215ENST00000561187 RIN2Q8WYP3 895 aaPredicted RBP29.91■■■□□ 2.38
SNRPA1-215ENST00000561187 CXCL16Q9H2A7 254 aa29.91■■■□□ 2.38
SNRPA1-215ENST00000561187 SNTG2Q9NY99 539 aa29.91■■■□□ 2.38
SNRPA1-215ENST00000561187 SSX2IPQ9Y2D8 614 aa29.91■■■□□ 2.38
SNRPA1-215ENST00000561187 CCDC195A0A1B0GUA6 201 aa29.9■■■□□ 2.38
SNRPA1-215ENST00000561187 EFEMP2O95967 443 aa29.9■■■□□ 2.38
SNRPA1-215ENST00000561187 PRKCBP05771 671 aa29.9■■■□□ 2.38
SNRPA1-215ENST00000561187 PRPF4BQ13523 1007 aaKnown RBP29.9■■■□□ 2.38
SNRPA1-215ENST00000561187 ECM1Q16610 540 aa29.9■■■□□ 2.38
SNRPA1-215ENST00000561187 ERICH6BQ5W0A0 696 aa29.9■■■□□ 2.38
SNRPA1-215ENST00000561187 OTOP3Q7RTS5 596 aa29.9■■■□□ 2.38
SNRPA1-215ENST00000561187 NOSTRINQ8IVI9 506 aa29.9■■■□□ 2.38
SNRPA1-215ENST00000561187 DEPTORQ8TB45 409 aa29.9■■■□□ 2.38
SNRPA1-215ENST00000561187 FOXP1Q9H334 677 aaPredicted RBP29.9■■■□□ 2.38
SNRPA1-215ENST00000561187 ADAM28Q9UKQ2 775 aa29.9■■■□□ 2.38
SNRPA1-215ENST00000561187 EIF5BO60841 1220 aaKnown RBP29.89■■■□□ 2.38
SNRPA1-215ENST00000561187 RPA1P27694 616 aa29.89■■■□□ 2.38
SNRPA1-215ENST00000561187 CCT6AP40227 531 aaKnown RBP29.89■■■□□ 2.38
SNRPA1-215ENST00000561187 PRSS55Q6UWB4 352 aaPredicted RBP29.89■■■□□ 2.38
SNRPA1-215ENST00000561187 PRIMPOLQ96LW4 560 aa29.89■■■□□ 2.38
SNRPA1-215ENST00000561187 PRRX2Q99811 253 aa29.89■■■□□ 2.38
SNRPA1-215ENST00000561187 LLPHQ9BRT6 129 aaKnown RBP29.89■■■□□ 2.38
SNRPA1-215ENST00000561187 MFSD1Q9H3U5 465 aa29.89■■■□□ 2.38
SNRPA1-215ENST00000561187 FZD8Q9H461 694 aa29.89■■■□□ 2.38
SNRPA1-215ENST00000561187 N4BP3O15049 544 aa29.88■■■□□ 2.37
SNRPA1-215ENST00000561187 TADA2AO75478 443 aa29.88■■■□□ 2.37
SNRPA1-215ENST00000561187 RECQL4O94761 1208 aa29.88■■■□□ 2.37
SNRPA1-215ENST00000561187 GBP2P32456 591 aaPredicted RBP29.88■■■□□ 2.37
SNRPA1-215ENST00000561187 USP41Q3LFD5 358 aa29.88■■■□□ 2.37
SNRPA1-215ENST00000561187 EEF1DP3Q658K8 133 aa29.88■■■□□ 2.37
SNRPA1-215ENST00000561187 C15orf39Q6ZRI6 1047 aa29.88■■■□□ 2.37
SNRPA1-215ENST00000561187 FBXO18Q8NFZ0 1043 aa29.88■■■□□ 2.37
SNRPA1-215ENST00000561187 C2orf40Q9H1Z8 148 aa29.88■■■□□ 2.37
SNRPA1-215ENST00000561187 RXFP1Q9HBX9 757 aa29.88■■■□□ 2.37
SNRPA1-215ENST00000561187 GDAQ9Y2T3 454 aa29.88■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms