RNA–Protein interactions for RNA: ENST00000560998.5

RABGGTA-220, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 1,997 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-220ENST00000560998 TEPSINQ96N21 525 aa15□□□□□ -0.01
RABGGTA-220ENST00000560998 RAB3IPQ96QF0 476 aaPredicted RBP15□□□□□ -0.01
RABGGTA-220ENST00000560998 BUD13Q9BRD0 619 aaKnown RBP eCLIP15□□□□□ -0.014e-7■■□□□ 11.9
RABGGTA-220ENST00000560998 MXRA8Q9BRK3 442 aa15□□□□□ -0.01
RABGGTA-220ENST00000560998 TEKT3Q9BXF9 490 aa15□□□□□ -0.01
RABGGTA-220ENST00000560998 TXLNGYQ9BZA5 131 aa15□□□□□ -0.01
RABGGTA-220ENST00000560998 PNMA2Q9UL42 364 aa15□□□□□ -0.01
RABGGTA-220ENST00000560998 FRMPD4Q14CM0 1322 aa15□□□□□ -0.01
RABGGTA-220ENST00000560998 RPTORQ8N122 1335 aa15□□□□□ -0.01
RABGGTA-220ENST00000560998 LOXHD1Q8IVV2 1947 aa15□□□□□ -0.01
RABGGTA-220ENST00000560998 SFI1A8K8P3 1242 aa15□□□□□ -0.01
RABGGTA-220ENST00000560998 PDLIM1O00151 329 aa15□□□□□ -0.01
RABGGTA-220ENST00000560998 WDR46O15213 610 aaKnown RBP15□□□□□ -0.01
RABGGTA-220ENST00000560998 SLC16A3O15427 465 aaKnown RBP15□□□□□ -0.01
RABGGTA-220ENST00000560998 EVI5O60447 810 aa15□□□□□ -0.01
RABGGTA-220ENST00000560998 SNX3O60493 162 aa15□□□□□ -0.01
RABGGTA-220ENST00000560998 AKAP3O75969 853 aa15□□□□□ -0.01
RABGGTA-220ENST00000560998 KIF4AO95239 1232 aa15□□□□□ -0.01
RABGGTA-220ENST00000560998 AGTP01019 485 aa15□□□□□ -0.01
RABGGTA-220ENST00000560998 AFPP02771 609 aaKnown RBP15□□□□□ -0.01
RABGGTA-220ENST00000560998 GNAT1P11488 350 aa15□□□□□ -0.01
RABGGTA-220ENST00000560998 RPL13P26373 211 aaKnown RBP15□□□□□ -0.01
RABGGTA-220ENST00000560998 ZNF280AP59817 542 aaPredicted RBP15□□□□□ -0.01
RABGGTA-220ENST00000560998 DHX9Q08211 1270 aaKnown RBP15□□□□□ -0.01
RABGGTA-220ENST00000560998 SLC18A3Q16572 532 aa15□□□□□ -0.01
RABGGTA-220ENST00000560998 DPY19L2P1Q6NXN4 242 aa15□□□□□ -0.01
RABGGTA-220ENST00000560998 CFAP61Q8NHU2 1237 aa15□□□□□ -0.01
RABGGTA-220ENST00000560998 FBF1Q8TES7 1133 aa15□□□□□ -0.01
RABGGTA-220ENST00000560998 CLEC4DQ8WXI8 215 aa15□□□□□ -0.01
RABGGTA-220ENST00000560998 BICD1Q96G01 975 aa15□□□□□ -0.01
RABGGTA-220ENST00000560998 NACC1Q96RE7 527 aa15□□□□□ -0.01
RABGGTA-220ENST00000560998 ELAC2Q9BQ52 826 aaKnown RBP15□□□□□ -0.01
RABGGTA-220ENST00000560998 INTS9Q9NV88 658 aaKnown RBP15□□□□□ -0.01
RABGGTA-220ENST00000560998 COL20A1Q9P218 1284 aa15□□□□□ -0.01
RABGGTA-220ENST00000560998 WRAP73Q9P2S5 460 aaPredicted RBP15□□□□□ -0.01
RABGGTA-220ENST00000560998 USP15Q9Y4E8 981 aaPredicted RBP15□□□□□ -0.01
RABGGTA-220ENST00000560998 ASB3Q9Y575 518 aa15□□□□□ -0.01
RABGGTA-220ENST00000560998 IPO5O00410 1097 aaKnown RBP14.99□□□□□ -0.01
RABGGTA-220ENST00000560998 HIP1RO75146 1068 aa14.99□□□□□ -0.01
RABGGTA-220ENST00000560998 SUN1O94901 812 aa14.99□□□□□ -0.01
RABGGTA-220ENST00000560998 ITGB5P18084 799 aa14.99□□□□□ -0.01
RABGGTA-220ENST00000560998 KLRC1P26715 233 aa14.99□□□□□ -0.01
RABGGTA-220ENST00000560998 ALDH3A1P30838 453 aa14.99□□□□□ -0.01
RABGGTA-220ENST00000560998 TGFB2P61812 414 aa14.99□□□□□ -0.01
RABGGTA-220ENST00000560998 MXRA7P84157 204 aa14.99□□□□□ -0.01
RABGGTA-220ENST00000560998 KCNA1Q09470 495 aa14.99□□□□□ -0.01
RABGGTA-220ENST00000560998 PPP2R5EQ16537 467 aa14.99□□□□□ -0.01
RABGGTA-220ENST00000560998 ASRGL1Q7L266 308 aa14.99□□□□□ -0.01
RABGGTA-220ENST00000560998 MYCT1Q8N699 235 aa14.99□□□□□ -0.01
RABGGTA-220ENST00000560998 MDM1Q8TC05 714 aa14.99□□□□□ -0.01
RABGGTA-220ENST00000560998 CNKSR2Q8WXI2 1034 aa14.99□□□□□ -0.01
RABGGTA-220ENST00000560998 RIT2Q99578 217 aa14.99□□□□□ -0.01
RABGGTA-220ENST00000560998 TRIM7Q9C029 511 aa14.99□□□□□ -0.01
RABGGTA-220ENST00000560998 KIAA1683Q9H0B3 1180 aa14.99□□□□□ -0.01
RABGGTA-220ENST00000560998 TAOK3Q9H2K8 898 aa14.99□□□□□ -0.01
RABGGTA-220ENST00000560998 METTL14Q9HCE5 456 aaKnown RBP14.99□□□□□ -0.01
RABGGTA-220ENST00000560998 ABCF3Q9NUQ8 709 aa14.99□□□□□ -0.01
RABGGTA-220ENST00000560998 AIPL1Q9NZN9 384 aa14.99□□□□□ -0.01
RABGGTA-220ENST00000560998 ADAM22Q9P0K1 906 aa14.99□□□□□ -0.01
RABGGTA-220ENST00000560998 UTP11Q9Y3A2 253 aaKnown RBP14.99□□□□□ -0.01
RABGGTA-220ENST00000560998 ZMYM2Q9UBW7 1377 aa14.99□□□□□ -0.01
RABGGTA-220ENST00000560998 NFIBO00712 420 aa14.98□□□□□ -0.01
RABGGTA-220ENST00000560998 KCNK3O14649 394 aa14.98□□□□□ -0.01
RABGGTA-220ENST00000560998 TGFB1I1O43294 461 aa14.98□□□□□ -0.01
RABGGTA-220ENST00000560998 BCRP11274 1271 aa14.98□□□□□ -0.01
RABGGTA-220ENST00000560998 XRCC5P13010 732 aaKnown RBP14.98□□□□□ -0.01
RABGGTA-220ENST00000560998 NMT1P30419 496 aaKnown RBP14.98□□□□□ -0.01
RABGGTA-220ENST00000560998 GHRHRQ02643 423 aa14.98□□□□□ -0.01
RABGGTA-220ENST00000560998 LAMB3Q13751 1172 aa14.98□□□□□ -0.01
RABGGTA-220ENST00000560998 RAPGEF1Q13905 1077 aa14.98□□□□□ -0.01
RABGGTA-220ENST00000560998 TNIP1Q15025 636 aa14.98□□□□□ -0.01
RABGGTA-220ENST00000560998 DALRD3Q5D0E6 543 aaKnown RBP14.98□□□□□ -0.01
RABGGTA-220ENST00000560998 RASGEF1CQ8N431 466 aa14.98□□□□□ -0.01
RABGGTA-220ENST00000560998 JDP2Q8WYK2 163 aa14.98□□□□□ -0.01
RABGGTA-220ENST00000560998 LPAR1Q92633 364 aa14.98□□□□□ -0.01
RABGGTA-220ENST00000560998 SELENOSQ9BQE4 189 aa14.98□□□□□ -0.01
RABGGTA-220ENST00000560998 PARVGQ9HBI0 331 aa14.98□□□□□ -0.01
RABGGTA-220ENST00000560998 KCND2Q9NZV8 630 aa14.98□□□□□ -0.01
RABGGTA-220ENST00000560998 SEL1LQ9UBV2 794 aa14.98□□□□□ -0.01
RABGGTA-220ENST00000560998 BRCA1P38398 1863 aaKnown RBP14.98□□□□□ -0.01
RABGGTA-220ENST00000560998 CAND2O75155 1236 aa14.98□□□□□ -0.01
RABGGTA-220ENST00000560998 EGFRP00533 1210 aa14.98□□□□□ -0.01
RABGGTA-220ENST00000560998 CASP4P49662 377 aa14.98□□□□□ -0.01
RABGGTA-220ENST00000560998 ASIC2Q16515 512 aa14.98□□□□□ -0.01
RABGGTA-220ENST00000560998 NFIL3Q16649 462 aa14.98□□□□□ -0.01
RABGGTA-220ENST00000560998 TBC1D25Q3MII6 688 aa14.98□□□□□ -0.01
RABGGTA-220ENST00000560998 NIPA1Q7RTP0 329 aa14.98□□□□□ -0.01
RABGGTA-220ENST00000560998 IL31RAQ8NI17 732 aa14.98□□□□□ -0.01
RABGGTA-220ENST00000560998 TEKT4Q8WW24 435 aa14.98□□□□□ -0.01
RABGGTA-220ENST00000560998 FIZ1Q96SL8 496 aa14.98□□□□□ -0.01
RABGGTA-220ENST00000560998 FMO2Q99518 471 aa14.98□□□□□ -0.01
RABGGTA-220ENST00000560998 TMEM109Q9BVC6 243 aa14.98□□□□□ -0.01
RABGGTA-220ENST00000560998 ADAM7Q9H2U9 754 aa14.98□□□□□ -0.01
RABGGTA-220ENST00000560998 MYH11P35749 1972 aa14.97□□□□□ -0.01
RABGGTA-220ENST00000560998 UBE4BO95155 1302 aa14.97□□□□□ -0.01
RABGGTA-220ENST00000560998 CLIC2O15247 247 aa14.97□□□□□ -0.01
RABGGTA-220ENST00000560998 DAPK3O43293 454 aa14.97□□□□□ -0.01
RABGGTA-220ENST00000560998 KRT16P08779 473 aa14.97□□□□□ -0.01
RABGGTA-220ENST00000560998 ACTN1P12814 892 aa14.97□□□□□ -0.01
RABGGTA-220ENST00000560998 SLC9A1P19634 815 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms