RNA–Protein interactions for RNA: ENST00000560861.1

SNX1-212, Transcript of sorting nexin 1, humanhuman

TSL 3

Gene SNX1, Length 850 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-212ENST00000560861 WNT8BQ93098 351 aa12.3□□□□□ -0.44
SNX1-212ENST00000560861 TRIM44Q96DX7 344 aaPredicted RBP12.3□□□□□ -0.44
SNX1-212ENST00000560861 IQCDQ96DY2 449 aa12.3□□□□□ -0.44
SNX1-212ENST00000560861 PANX2Q96RD6 677 aa12.3□□□□□ -0.44
SNX1-212ENST00000560861 NUP58Q9BVL2 599 aa12.3□□□□□ -0.44
SNX1-212ENST00000560861 EDEM3Q9BZQ6 932 aa12.3□□□□□ -0.44
SNX1-212ENST00000560861 INO80BQ9C086 356 aaPredicted RBP12.3□□□□□ -0.44
SNX1-212ENST00000560861 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.3□□□□□ -0.44
SNX1-212ENST00000560861 FAM49AQ9H0Q0 323 aaPredicted RBP12.3□□□□□ -0.44
SNX1-212ENST00000560861 CDHR5Q9HBB8 845 aa12.3□□□□□ -0.44
SNX1-212ENST00000560861 KIAA1586Q9HCI6 787 aa12.3□□□□□ -0.44
SNX1-212ENST00000560861 SIX2Q9NPC8 291 aa12.3□□□□□ -0.44
SNX1-212ENST00000560861 PAK6Q9NQU5 681 aaPredicted RBP12.3□□□□□ -0.44
SNX1-212ENST00000560861 AGO2Q9UKV8 859 aaKnown RBP12.3□□□□□ -0.44
SNX1-212ENST00000560861 RALGAPA2Q2PPJ7 1873 aa12.29□□□□□ -0.44
SNX1-212ENST00000560861 MOXD2PA6NHM9 499 aa12.29□□□□□ -0.44
SNX1-212ENST00000560861 LRRIQ3A6PVS8 624 aaPredicted RBP12.29□□□□□ -0.44
SNX1-212ENST00000560861 AKR1B15C9JRZ8 316 aaPredicted RBP12.29□□□□□ -0.44
SNX1-212ENST00000560861 PES1O00541 588 aaKnown RBP12.29□□□□□ -0.44
SNX1-212ENST00000560861 P4HA2O15460 535 aa12.29□□□□□ -0.44
SNX1-212ENST00000560861 TSPAN1O60635 241 aa12.29□□□□□ -0.44
SNX1-212ENST00000560861 KRT13P13646 458 aa12.29□□□□□ -0.44
SNX1-212ENST00000560861 DARSP14868 501 aaKnown RBP12.29□□□□□ -0.44
SNX1-212ENST00000560861 ARF4P18085 180 aaPredicted RBP12.29□□□□□ -0.44
SNX1-212ENST00000560861 SFPQP23246 707 aaKnown RBP eCLIP12.29□□□□□ -0.44
SNX1-212ENST00000560861 ADKP55263 362 aaKnown RBP12.29□□□□□ -0.44
SNX1-212ENST00000560861 CHMP4BP1P59074 171 aa12.29□□□□□ -0.44
SNX1-212ENST00000560861 PTPN11Q06124 597 aaPredicted RBP12.29□□□□□ -0.44
SNX1-212ENST00000560861 PRPF4BQ13523 1007 aaKnown RBP12.29□□□□□ -0.44
SNX1-212ENST00000560861 PSMD6Q15008 389 aa12.29□□□□□ -0.44
SNX1-212ENST00000560861 KIZQ2M2Z5 673 aa12.29□□□□□ -0.44
SNX1-212ENST00000560861 TRIM71Q2Q1W2 868 aaKnown RBP12.29□□□□□ -0.44
SNX1-212ENST00000560861 CBWD6Q4V339 395 aa12.29□□□□□ -0.44
SNX1-212ENST00000560861 EPC2Q52LR7 807 aa12.29□□□□□ -0.44
SNX1-212ENST00000560861 CBWD3Q5JTY5 395 aa12.29□□□□□ -0.44
SNX1-212ENST00000560861 CBWD5Q5RIA9 395 aa12.29□□□□□ -0.44
SNX1-212ENST00000560861 ATF7IP2Q5U623 682 aa12.29□□□□□ -0.44
SNX1-212ENST00000560861 TAF2Q6P1X5 1199 aa12.29□□□□□ -0.44
SNX1-212ENST00000560861 MPZL3Q6UWV2 235 aa12.29□□□□□ -0.44
SNX1-212ENST00000560861 C15orf39Q6ZRI6 1047 aa12.29□□□□□ -0.44
SNX1-212ENST00000560861 RNF180Q86T96 592 aa12.29□□□□□ -0.44
SNX1-212ENST00000560861 ZSCAN30Q86W11 494 aa12.29□□□□□ -0.44
SNX1-212ENST00000560861 PPFIBP1Q86W92 1011 aa12.29□□□□□ -0.44
SNX1-212ENST00000560861 BRSK2Q8IWQ3 736 aa12.29□□□□□ -0.44
SNX1-212ENST00000560861 ZNF710Q8N1W2 664 aa12.29□□□□□ -0.44
SNX1-212ENST00000560861 NME8Q8N427 588 aa12.29□□□□□ -0.44
SNX1-212ENST00000560861 SLC43A3Q8NBI5 491 aa12.29□□□□□ -0.44
SNX1-212ENST00000560861 RDH13Q8NBN7 331 aa12.29□□□□□ -0.44
SNX1-212ENST00000560861 SH3TC2Q8TF17 1288 aa12.29□□□□□ -0.44
SNX1-212ENST00000560861 BAP1Q92560 729 aa12.29□□□□□ -0.44
SNX1-212ENST00000560861 CCDC51Q96ER9 411 aa12.29□□□□□ -0.44
SNX1-212ENST00000560861 PPP1R16BQ96T49 567 aa12.29□□□□□ -0.44
SNX1-212ENST00000560861 DNAJC7Q99615 494 aa12.29□□□□□ -0.44
SNX1-212ENST00000560861 FAM213AQ9BRX8 229 aa12.29□□□□□ -0.44
SNX1-212ENST00000560861 MSTO1Q9BUK6 570 aa12.29□□□□□ -0.44
SNX1-212ENST00000560861 UNC93B1Q9H1C4 597 aa12.29□□□□□ -0.44
SNX1-212ENST00000560861 CDT1Q9H211 546 aa12.29□□□□□ -0.44
SNX1-212ENST00000560861 PDZD7Q9H5P4 517 aa12.29□□□□□ -0.44
SNX1-212ENST00000560861 PLCB1Q9NQ66 1216 aa12.29□□□□□ -0.44
SNX1-212ENST00000560861 PYCARDQ9ULZ3 195 aa12.29□□□□□ -0.44
SNX1-212ENST00000560861 PHF24Q9UPV7 400 aa12.29□□□□□ -0.44
SNX1-212ENST00000560861 ZNF233A6NK53 670 aa12.28□□□□□ -0.44
SNX1-212ENST00000560861 OGTO15294 1046 aa12.28□□□□□ -0.44
SNX1-212ENST00000560861 MEFVO15553 781 aaPredicted RBP12.28□□□□□ -0.44
SNX1-212ENST00000560861 CSDE1O75534 798 aaKnown RBP12.28□□□□□ -0.44
SNX1-212ENST00000560861 LDHAP00338 332 aaKnown RBP12.28□□□□□ -0.44
SNX1-212ENST00000560861 SLC9A1P19634 815 aa12.28□□□□□ -0.44
SNX1-212ENST00000560861 PON1P27169 355 aa12.28□□□□□ -0.44
SNX1-212ENST00000560861 HOXA11P31270 313 aaPredicted RBP12.28□□□□□ -0.44
SNX1-212ENST00000560861 HNRNPH3P31942 346 aaKnown RBP12.28□□□□□ -0.44
SNX1-212ENST00000560861 SNX17Q15036 470 aa12.28□□□□□ -0.44
SNX1-212ENST00000560861 PCBP1Q15365 356 aaKnown RBP eCLIP12.28□□□□□ -0.44
SNX1-212ENST00000560861 TCERG1LQ5VWI1 586 aa12.28□□□□□ -0.44
SNX1-212ENST00000560861 CNGA4Q8IV77 575 aa12.28□□□□□ -0.44
SNX1-212ENST00000560861 KIAA1524Q8TCG1 905 aa12.28□□□□□ -0.44
SNX1-212ENST00000560861 TMEM40Q8WWA1 233 aa12.28□□□□□ -0.44
SNX1-212ENST00000560861 NLRP7Q8WX94 980 aa12.28□□□□□ -0.44
SNX1-212ENST00000560861 CRACR2AQ9BSW2 395 aa12.28□□□□□ -0.44
SNX1-212ENST00000560861 LSM14BQ9BX40 385 aaKnown RBP12.28□□□□□ -0.44
SNX1-212ENST00000560861 GCOM2Q9BZD3 368 aaPredicted RBP12.28□□□□□ -0.44
SNX1-212ENST00000560861 TMEM117Q9H0C3 514 aa12.28□□□□□ -0.44
SNX1-212ENST00000560861 ANKFY1Q9P2R3 1169 aa12.28□□□□□ -0.44
SNX1-212ENST00000560861 CPSF3Q9UKF6 684 aaKnown RBP12.28□□□□□ -0.44
SNX1-212ENST00000560861 COQ4Q9Y3A0 265 aa12.28□□□□□ -0.44
SNX1-212ENST00000560861 CITO14578 2027 aa12.28□□□□□ -0.44
SNX1-212ENST00000560861 BRCA2P51587 3418 aa12.28□□□□□ -0.44
SNX1-212ENST00000560861 PDCD11Q14690 1871 aaKnown RBP12.27□□□□□ -0.44
SNX1-212ENST00000560861 TRIP11Q15643 1979 aa12.27□□□□□ -0.44
SNX1-212ENST00000560861 A0A1B0GUA9 196 aa12.27□□□□□ -0.45
SNX1-212ENST00000560861 CLDN3O15551 220 aa12.27□□□□□ -0.45
SNX1-212ENST00000560861 N4BP1O75113 896 aaKnown RBP12.27□□□□□ -0.45
SNX1-212ENST00000560861 MCF2P10911 925 aa12.27□□□□□ -0.45
SNX1-212ENST00000560861 GTF2H1P32780 548 aa12.27□□□□□ -0.45
SNX1-212ENST00000560861 KRT9P35527 623 aa12.27□□□□□ -0.45
SNX1-212ENST00000560861 TNFSF9P41273 254 aa12.27□□□□□ -0.45
SNX1-212ENST00000560861 KCNJ6P48051 423 aa12.27□□□□□ -0.45
SNX1-212ENST00000560861 ACOT2P49753 483 aa12.27□□□□□ -0.45
SNX1-212ENST00000560861 CRYBB1P53674 252 aaPredicted RBP12.27□□□□□ -0.45
SNX1-212ENST00000560861 MRPS6P82932 125 aaKnown RBP12.27□□□□□ -0.45
SNX1-212ENST00000560861 ZBED6P86452 979 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms