RNA–Protein interactions for RNA: ENST00000560447.1

RTF1-206, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 3

Gene RTF1, Length 551 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-206ENST00000560447 TMEM117Q9H0C3 514 aa10.49□□□□□ -0.73
RTF1-206ENST00000560447 A1CFQ9NQ94 594 aaKnown RBP10.49□□□□□ -0.73
RTF1-206ENST00000560447 PKD2L1Q9P0L9 805 aa10.49□□□□□ -0.73
RTF1-206ENST00000560447 ARHGAP28Q9P2N2 729 aa10.49□□□□□ -0.73
RTF1-206ENST00000560447 GABBR1Q9UBS5 961 aa10.49□□□□□ -0.73
RTF1-206ENST00000560447 DMGDHQ9UI17 866 aaKnown RBP10.49□□□□□ -0.73
RTF1-206ENST00000560447 ADAM21Q9UKJ8 722 aa10.49□□□□□ -0.73
RTF1-206ENST00000560447 VPS9D1Q9Y2B5 631 aa10.49□□□□□ -0.73
RTF1-206ENST00000560447 RIPK3Q9Y572 518 aa10.49□□□□□ -0.73
RTF1-206ENST00000560447 ZNF541Q9H0D2 1346 aa10.49□□□□□ -0.73
RTF1-206ENST00000560447 ZC3H4Q9UPT8 1303 aaKnown RBP10.49□□□□□ -0.73
RTF1-206ENST00000560447 DENND3A2RUS2 1198 aa10.48□□□□□ -0.73
RTF1-206ENST00000560447 FOXN3O00409 490 aaPredicted RBP10.48□□□□□ -0.73
RTF1-206ENST00000560447 KCNK3O14649 394 aa10.48□□□□□ -0.73
RTF1-206ENST00000560447 SLC16A4O15374 487 aa10.48□□□□□ -0.73
RTF1-206ENST00000560447 GAS2O43903 313 aaKnown RBP10.48□□□□□ -0.73
RTF1-206ENST00000560447 GGPS1O95749 300 aa10.48□□□□□ -0.73
RTF1-206ENST00000560447 LDHAP00338 332 aaKnown RBP10.48□□□□□ -0.73
RTF1-206ENST00000560447 TGFB3P10600 412 aa10.48□□□□□ -0.73
RTF1-206ENST00000560447 CLDN10P78369 228 aa10.48□□□□□ -0.73
RTF1-206ENST00000560447 GCNT1Q02742 428 aa10.48□□□□□ -0.73
RTF1-206ENST00000560447 PPP3CAQ08209 521 aa10.48□□□□□ -0.73
RTF1-206ENST00000560447 PPFIA1Q13136 1202 aa10.48□□□□□ -0.73
RTF1-206ENST00000560447 ENOX2Q16206 610 aaKnown RBP10.48□□□□□ -0.73
RTF1-206ENST00000560447 SLFN12LQ6IEE8 588 aa10.48□□□□□ -0.73
RTF1-206ENST00000560447 GJB7Q6PEY0 223 aa10.48□□□□□ -0.73
RTF1-206ENST00000560447 KCNV1Q6PIU1 500 aa10.48□□□□□ -0.73
RTF1-206ENST00000560447 MAATS1Q7Z4T9 603 aa10.48□□□□□ -0.73
RTF1-206ENST00000560447 DAAM2Q86T65 1068 aa10.48□□□□□ -0.73
RTF1-206ENST00000560447 ZNF677Q86XU0 584 aa10.48□□□□□ -0.73
RTF1-206ENST00000560447 RIOX2Q8IUF8 465 aa10.48□□□□□ -0.73
RTF1-206ENST00000560447 GLYCTKQ8IVS8 523 aa10.48□□□□□ -0.73
RTF1-206ENST00000560447 KSR1Q8IVT5 923 aa10.48□□□□□ -0.73
RTF1-206ENST00000560447 EFCAB13Q8IY85 973 aa10.48□□□□□ -0.73
RTF1-206ENST00000560447 GPD1LQ8N335 351 aa10.48□□□□□ -0.73
RTF1-206ENST00000560447 PROCA1Q8NCQ7 364 aaPredicted RBP10.48□□□□□ -0.73
RTF1-206ENST00000560447 CCDC26Q8TAB7 109 aa10.48□□□□□ -0.73
RTF1-206ENST00000560447 ZKSCAN4Q969J2 545 aaPredicted RBP10.48□□□□□ -0.73
RTF1-206ENST00000560447 CCDC102AQ96A19 550 aa10.48□□□□□ -0.73
RTF1-206ENST00000560447 RUNDC3BQ96NL0 473 aa10.48□□□□□ -0.73
RTF1-206ENST00000560447 NT5C1BQ96P26 610 aa10.48□□□□□ -0.73
RTF1-206ENST00000560447 NIFKQ9BYG3 293 aaKnown RBP10.48□□□□□ -0.73
RTF1-206ENST00000560447 POLD4Q9HCU8 107 aa10.48□□□□□ -0.73
RTF1-206ENST00000560447 UBE2TQ9NPD8 197 aaPredicted RBP10.48□□□□□ -0.73
RTF1-206ENST00000560447 CYP26B1Q9NR63 512 aa10.48□□□□□ -0.73
RTF1-206ENST00000560447 SLTMQ9NWH9 1034 aaKnown RBP eCLIP10.48□□□□□ -0.73
RTF1-206ENST00000560447 MAFBQ9Y5Q3 323 aaPredicted RBP10.48□□□□□ -0.73
RTF1-206ENST00000560447 STYXL1Q9Y6J8 313 aa10.48□□□□□ -0.73
RTF1-206ENST00000560447 POLR2AP24928 1970 aaKnown RBP10.47□□□□□ -0.73
RTF1-206ENST00000560447 IGKV6D-21A0A0A0MT36 114 aa10.47□□□□□ -0.73
RTF1-206ENST00000560447 GOLGA6BA6NDN3 693 aa10.47□□□□□ -0.73
RTF1-206ENST00000560447 CCDC169A6NNP5 214 aa10.47□□□□□ -0.73
RTF1-206ENST00000560447 POLR3GO15318 223 aaPredicted RBP10.47□□□□□ -0.73
RTF1-206ENST00000560447 EXTL3O43909 919 aa10.47□□□□□ -0.73
RTF1-206ENST00000560447 ZNF862O60290 1169 aa10.47□□□□□ -0.73
RTF1-206ENST00000560447 HSF2BPO75031 334 aa10.47□□□□□ -0.73
RTF1-206ENST00000560447 RPS6KA5O75582 802 aa10.47□□□□□ -0.73
RTF1-206ENST00000560447 RGS20O76081 388 aa10.47□□□□□ -0.73
RTF1-206ENST00000560447 HEXIM1O94992 359 aaKnown RBP10.47□□□□□ -0.73
RTF1-206ENST00000560447 ADRB2P07550 413 aa10.47□□□□□ -0.73
RTF1-206ENST00000560447 EDNRBP24530 442 aa10.47□□□□□ -0.73
RTF1-206ENST00000560447 ADSSP30520 456 aa10.47□□□□□ -0.73
RTF1-206ENST00000560447 CXCR5P32302 372 aa10.47□□□□□ -0.73
RTF1-206ENST00000560447 GBP1P32455 592 aa10.47□□□□□ -0.73
RTF1-206ENST00000560447 NAMPTP43490 491 aa10.47□□□□□ -0.73
RTF1-206ENST00000560447 BPIFB4P59827 614 aa10.47□□□□□ -0.73
RTF1-206ENST00000560447 ACTR2P61160 394 aa10.47□□□□□ -0.73
RTF1-206ENST00000560447 GPC5P78333 572 aa10.47□□□□□ -0.73
RTF1-206ENST00000560447 PRKCEQ02156 737 aa10.47□□□□□ -0.73
RTF1-206ENST00000560447 CYP24A1Q07973 514 aa10.47□□□□□ -0.73
RTF1-206ENST00000560447 SPDYCQ5MJ68 293 aa10.47□□□□□ -0.73
RTF1-206ENST00000560447 PLA2G4FQ68DD2 849 aa10.47□□□□□ -0.73
RTF1-206ENST00000560447 CD302Q8IX05 232 aa10.47□□□□□ -0.73
RTF1-206ENST00000560447 METTL13Q8N6R0 699 aa10.47□□□□□ -0.73
RTF1-206ENST00000560447 FBXL13Q8NEE6 735 aa10.47□□□□□ -0.73
RTF1-206ENST00000560447 SLC35G2Q8TBE7 412 aa10.47□□□□□ -0.73
RTF1-206ENST00000560447 ZDHHC16Q969W1 377 aa10.47□□□□□ -0.73
RTF1-206ENST00000560447 TRIM11Q96F44 468 aa10.47□□□□□ -0.73
RTF1-206ENST00000560447 FAM167AQ96KS9 214 aa10.47□□□□□ -0.73
RTF1-206ENST00000560447 SH3GL2Q99962 352 aa10.47□□□□□ -0.73
RTF1-206ENST00000560447 ADAM33Q9BZ11 813 aa10.47□□□□□ -0.73
RTF1-206ENST00000560447 PCIF1Q9H4Z3 704 aa10.47□□□□□ -0.73
RTF1-206ENST00000560447 TMEM134Q9H6X4 195 aa10.47□□□□□ -0.73
RTF1-206ENST00000560447 ST7Q9NRC1 585 aa10.47□□□□□ -0.73
RTF1-206ENST00000560447 GGA3Q9NZ52 723 aa10.47□□□□□ -0.73
RTF1-206ENST00000560447 CALCOCO1Q9P1Z2 691 aa10.47□□□□□ -0.73
RTF1-206ENST00000560447 UVRAGQ9P2Y5 699 aa10.47□□□□□ -0.73
RTF1-206ENST00000560447 PRDM4Q9UKN5 801 aa10.47□□□□□ -0.73
RTF1-206ENST00000560447 SYNGAP1Q96PV0 1343 aa10.47□□□□□ -0.73
RTF1-206ENST00000560447 ZNFX1Q9P2E3 1918 aaKnown RBP10.46□□□□□ -0.73
RTF1-206ENST00000560447 GOLGA6L10A0A0M3HER8 536 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 ZNF233A6NK53 670 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 TMCO5BA8MYB1 307 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 IRF6O14896 467 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 CEP104O60308 925 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 SLC25A27O95847 323 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 SYF2O95926 243 aaKnown RBP10.46□□□□□ -0.73
RTF1-206ENST00000560447 OATP04181 439 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 GCLMP48507 274 aa10.46□□□□□ -0.73
RTF1-206ENST00000560447 AP3M2P53677 418 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms