RNA–Protein interactions for RNA: ENST00000560299.1

SPG11-221, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 437 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-221ENST00000560299 DIS3LQ8TF46 1054 aaKnown RBP7.02□□□□□ -1.29
SPG11-221ENST00000560299 DNAJB3Q8WWF6 145 aa7.02□□□□□ -1.29
SPG11-221ENST00000560299 FDXACB1Q9BRP7 624 aaPredicted RBP7.02□□□□□ -1.29
SPG11-221ENST00000560299 ADPGKQ9BRR6 497 aa7.02□□□□□ -1.29
SPG11-221ENST00000560299 XPO4Q9C0E2 1151 aaKnown RBP7.02□□□□□ -1.29
SPG11-221ENST00000560299 SENP6Q9GZR1 1112 aaPredicted RBP7.02□□□□□ -1.29
SPG11-221ENST00000560299 VPS16Q9H269 839 aa7.02□□□□□ -1.29
SPG11-221ENST00000560299 HSD3B7Q9H2F3 369 aa7.02□□□□□ -1.29
SPG11-221ENST00000560299 FZD8Q9H461 694 aa7.02□□□□□ -1.29
SPG11-221ENST00000560299 DMAC2Q9NW81 257 aa7.02□□□□□ -1.29
SPG11-221ENST00000560299 HSPBP1Q9NZL4 362 aa7.02□□□□□ -1.29
SPG11-221ENST00000560299 UTP18Q9Y5J1 556 aaKnown RBP eCLIP7.02□□□□□ -1.29
SPG11-221ENST00000560299 GRIN2DO15399 1336 aa7.01□□□□□ -1.29
SPG11-221ENST00000560299 ADGRA3Q8IWK6 1321 aa7.01□□□□□ -1.29
SPG11-221ENST00000560299 TRIP12Q14669 1992 aaPredicted RBP7.01□□□□□ -1.29
SPG11-221ENST00000560299 ZMYM2Q9UBW7 1377 aa7.01□□□□□ -1.29
SPG11-221ENST00000560299 A0A1B0GTH6 734 aa7.01□□□□□ -1.29
SPG11-221ENST00000560299 ZNF233A6NK53 670 aa7.01□□□□□ -1.29
SPG11-221ENST00000560299 TLR3O15455 904 aaKnown RBP7.01□□□□□ -1.29
SPG11-221ENST00000560299 NRDCO43847 1150 aa7.01□□□□□ -1.29
SPG11-221ENST00000560299 TOM1L1O75674 476 aa7.01□□□□□ -1.29
SPG11-221ENST00000560299 CLTBP09497 229 aa7.01□□□□□ -1.29
SPG11-221ENST00000560299 SFPQP23246 707 aaKnown RBP eCLIP7.01□□□□□ -1.29
SPG11-221ENST00000560299 AXLP30530 894 aa7.01□□□□□ -1.29
SPG11-221ENST00000560299 CRYBB1P53674 252 aaPredicted RBP7.01□□□□□ -1.29
SPG11-221ENST00000560299 UBXN1Q04323 297 aa7.01□□□□□ -1.29
SPG11-221ENST00000560299 TLE2Q04725 743 aa7.01□□□□□ -1.29
SPG11-221ENST00000560299 ENPEPQ07075 957 aa7.01□□□□□ -1.29
SPG11-221ENST00000560299 FAAP100Q0VG06 881 aa7.01□□□□□ -1.29
SPG11-221ENST00000560299 PTK7Q13308 1070 aa7.01□□□□□ -1.29
SPG11-221ENST00000560299 NR1I3Q14994 352 aa7.01□□□□□ -1.29
SPG11-221ENST00000560299 LRRC26Q2I0M4 334 aa7.01□□□□□ -1.29
SPG11-221ENST00000560299 VWA3BQ502W6 1294 aa7.01□□□□□ -1.29
SPG11-221ENST00000560299 VARS2Q5ST30 1063 aaKnown RBP7.01□□□□□ -1.29
SPG11-221ENST00000560299 ATF7IP2Q5U623 682 aa7.01□□□□□ -1.29
SPG11-221ENST00000560299 TCERG1LQ5VWI1 586 aa7.01□□□□□ -1.29
SPG11-221ENST00000560299 GDF6Q6KF10 455 aaPredicted RBP7.01□□□□□ -1.29
SPG11-221ENST00000560299 TSHZ1Q6ZSZ6 1077 aa7.01□□□□□ -1.29
SPG11-221ENST00000560299 INTS8Q75QN2 995 aaKnown RBP7.01□□□□□ -1.29
SPG11-221ENST00000560299 SERINC5Q86VE9 423 aa7.01□□□□□ -1.29
SPG11-221ENST00000560299 IRF2BP1Q8IU81 584 aa7.01□□□□□ -1.29
SPG11-221ENST00000560299 GPD1LQ8N335 351 aa7.01□□□□□ -1.29
SPG11-221ENST00000560299 CCDC155Q8N6L0 562 aa7.01□□□□□ -1.29
SPG11-221ENST00000560299 CAGE1Q8TC20 777 aa7.01□□□□□ -1.29
SPG11-221ENST00000560299 TRIM44Q96DX7 344 aaPredicted RBP7.01□□□□□ -1.29
SPG11-221ENST00000560299 IQCDQ96DY2 449 aa7.01□□□□□ -1.29
SPG11-221ENST00000560299 EEF2KMTQ96G04 330 aa7.01□□□□□ -1.29
SPG11-221ENST00000560299 ACO2Q99798 780 aaKnown RBP7.01□□□□□ -1.29
SPG11-221ENST00000560299 GDF15Q99988 308 aa7.01□□□□□ -1.29
SPG11-221ENST00000560299 MSTO1Q9BUK6 570 aa7.01□□□□□ -1.29
SPG11-221ENST00000560299 TARS2Q9BW92 718 aaKnown RBP7.01□□□□□ -1.29
SPG11-221ENST00000560299 NDST4Q9H3R1 872 aa7.01□□□□□ -1.29
SPG11-221ENST00000560299 PCIF1Q9H4Z3 704 aa7.01□□□□□ -1.29
SPG11-221ENST00000560299 IFT122Q9HBG6 1241 aa7.01□□□□□ -1.29
SPG11-221ENST00000560299 RTN4Q9NQC3 1192 aaKnown RBP7.01□□□□□ -1.29
SPG11-221ENST00000560299 TAB2Q9NYJ8 693 aa7.01□□□□□ -1.29
SPG11-221ENST00000560299 IMPACTQ9P2X3 320 aa7.01□□□□□ -1.29
SPG11-221ENST00000560299 AGO2Q9UKV8 859 aaKnown RBP7.01□□□□□ -1.29
SPG11-221ENST00000560299 GINS2Q9Y248 185 aa7.01□□□□□ -1.29
SPG11-221ENST00000560299 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP7.01□□□□□ -1.29
SPG11-221ENST00000560299 STYXL1Q9Y6J8 313 aa7.01□□□□□ -1.29
SPG11-221ENST00000560299 SQORQ9Y6N5 450 aa7.01□□□□□ -1.29
SPG11-221ENST00000560299 A0A0B4J269 797 aa7□□□□□ -1.29
SPG11-221ENST00000560299 A0A1W2PQC6 194 aa7□□□□□ -1.29
SPG11-221ENST00000560299 LGALS16A8MUM7 142 aa7□□□□□ -1.29
SPG11-221ENST00000560299 ANKRD63C9JTQ0 380 aa7□□□□□ -1.29
SPG11-221ENST00000560299 EXTL3O43909 919 aa7□□□□□ -1.29
SPG11-221ENST00000560299 N4BP1O75113 896 aaKnown RBP7□□□□□ -1.29
SPG11-221ENST00000560299 GPR32O75388 356 aa7□□□□□ -1.29
SPG11-221ENST00000560299 AKAP3O75969 853 aa7□□□□□ -1.29
SPG11-221ENST00000560299 TIMP1P01033 207 aa7□□□□□ -1.29
SPG11-221ENST00000560299 MYCP01106 439 aaPredicted RBP7□□□□□ -1.29
SPG11-221ENST00000560299 DARSP14868 501 aaKnown RBP7□□□□□ -1.29
SPG11-221ENST00000560299 EIF4BP23588 611 aaKnown RBP7□□□□□ -1.29
SPG11-221ENST00000560299 PSEN1P49768 467 aa7□□□□□ -1.29
SPG11-221ENST00000560299 GSDMDP57764 484 aa7□□□□□ -1.29
SPG11-221ENST00000560299 MRPS6P82932 125 aaKnown RBP7□□□□□ -1.29
SPG11-221ENST00000560299 ZNF200P98182 395 aaPredicted RBP7□□□□□ -1.29
SPG11-221ENST00000560299 POU5F1Q01860 360 aaKnown RBP7□□□□□ -1.29
SPG11-221ENST00000560299 MBTD1Q05BQ5 628 aa7□□□□□ -1.29
SPG11-221ENST00000560299 BFSP1Q12934 665 aa7□□□□□ -1.29
SPG11-221ENST00000560299 TRIM14Q14142 442 aa7□□□□□ -1.29
SPG11-221ENST00000560299 NOLC1Q14978 699 aaKnown RBP eCLIP7□□□□□ -1.29
SPG11-221ENST00000560299 SURF1Q15526 300 aa7□□□□□ -1.29
SPG11-221ENST00000560299 SNRNP35Q16560 246 aaKnown RBP7□□□□□ -1.29
SPG11-221ENST00000560299 KIZQ2M2Z5 673 aa7□□□□□ -1.29
SPG11-221ENST00000560299 DCAF17Q5H9S7 520 aaPredicted RBP7□□□□□ -1.29
SPG11-221ENST00000560299 SPECC1LQ69YQ0 1117 aa7□□□□□ -1.29
SPG11-221ENST00000560299 MFSD5Q6N075 450 aa7□□□□□ -1.29
SPG11-221ENST00000560299 MPZL3Q6UWV2 235 aa7□□□□□ -1.29
SPG11-221ENST00000560299 RUFY4Q6ZNE9 571 aa7□□□□□ -1.29
SPG11-221ENST00000560299 TAS1R3Q7RTX0 852 aa7□□□□□ -1.29
SPG11-221ENST00000560299 CATSPER4Q7RTX7 472 aa7□□□□□ -1.29
SPG11-221ENST00000560299 PPFIBP1Q86W92 1011 aa7□□□□□ -1.29
SPG11-221ENST00000560299 TRIM59Q8IWR1 403 aa7□□□□□ -1.29
SPG11-221ENST00000560299 USP38Q8NB14 1042 aa7□□□□□ -1.29
SPG11-221ENST00000560299 RDH13Q8NBN7 331 aa7□□□□□ -1.29
SPG11-221ENST00000560299 DPF3Q92784 378 aa7□□□□□ -1.29
SPG11-221ENST00000560299 ZBTB10Q96DT7 871 aa7□□□□□ -1.29
SPG11-221ENST00000560299 PDLIM2Q96JY6 352 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms