RNA–Protein interactions for RNA: ENST00000560297.5

USP8-209, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 652 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-209ENST00000560297 UBN1Q9NPG3 1134 aa13.41□□□□□ -0.26
USP8-209ENST00000560297 TYW1Q9NV66 732 aaKnown RBP13.41□□□□□ -0.26
USP8-209ENST00000560297 TMEM161AQ9NX61 479 aa13.41□□□□□ -0.26
USP8-209ENST00000560297 PCDH10Q9P2E7 1040 aa13.41□□□□□ -0.26
USP8-209ENST00000560297 DACH1Q9UI36 760 aa13.41□□□□□ -0.26
USP8-209ENST00000560297 LRFN2Q9ULH4 789 aa13.41□□□□□ -0.26
USP8-209ENST00000560297 MAPK8IP1Q9UQF2 711 aa13.41□□□□□ -0.26
USP8-209ENST00000560297 ABLIM1O14639 778 aa13.4□□□□□ -0.26
USP8-209ENST00000560297 OGTO15294 1046 aa13.4□□□□□ -0.26
USP8-209ENST00000560297 TGFB1I1O43294 461 aa13.4□□□□□ -0.26
USP8-209ENST00000560297 HOXA2O43364 376 aa13.4□□□□□ -0.26
USP8-209ENST00000560297 CALUO43852 315 aaPredicted RBP13.4□□□□□ -0.26
USP8-209ENST00000560297 LDHAP00338 332 aaKnown RBP13.4□□□□□ -0.26
USP8-209ENST00000560297 ADSSP30520 456 aa13.4□□□□□ -0.26
USP8-209ENST00000560297 NLRP12P59046 1061 aa13.4□□□□□ -0.26
USP8-209ENST00000560297 POU5F1Q01860 360 aaKnown RBP13.4□□□□□ -0.26
USP8-209ENST00000560297 MYBPC2Q14324 1141 aa13.4□□□□□ -0.26
USP8-209ENST00000560297 CENPPQ6IPU0 288 aa13.4□□□□□ -0.26
USP8-209ENST00000560297 ARMCX5Q6P1M9 558 aa13.4□□□□□ -0.26
USP8-209ENST00000560297 SLC39A4Q6P5W5 647 aa13.4□□□□□ -0.26
USP8-209ENST00000560297 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.4□□□□□ -0.265e-6■■■■□ 19.3
USP8-209ENST00000560297 ZBTB33Q86T24 672 aa13.4□□□□□ -0.26
USP8-209ENST00000560297 CDR2LQ86X02 465 aaPredicted RBP13.4□□□□□ -0.26
USP8-209ENST00000560297 C12orf56Q8IXR9 622 aa13.4□□□□□ -0.26
USP8-209ENST00000560297 SMYD4Q8IYR2 804 aaPredicted RBP13.4□□□□□ -0.26
USP8-209ENST00000560297 RNPC3Q96LT9 517 aaKnown RBP13.4□□□□□ -0.26
USP8-209ENST00000560297 SLC9A7Q96T83 725 aa13.4□□□□□ -0.26
USP8-209ENST00000560297 EIF2AQ9BY44 585 aaKnown RBP13.4□□□□□ -0.26
USP8-209ENST00000560297 CDT1Q9H211 546 aa13.4□□□□□ -0.26
USP8-209ENST00000560297 KIAA1586Q9HCI6 787 aa13.4□□□□□ -0.26
USP8-209ENST00000560297 AGPAT3Q9NRZ7 376 aa13.4□□□□□ -0.26
USP8-209ENST00000560297 ANKFY1Q9P2R3 1169 aa13.4□□□□□ -0.26
USP8-209ENST00000560297 AGO2Q9UKV8 859 aaKnown RBP13.4□□□□□ -0.26
USP8-209ENST00000560297 TRAF3IP3Q9Y228 551 aa13.4□□□□□ -0.26
USP8-209ENST00000560297 IPPQ9Y573 584 aa13.4□□□□□ -0.26
USP8-209ENST00000560297 BICDL2A1A5D9 508 aa13.39□□□□□ -0.27
USP8-209ENST00000560297 PPP1R3GB7ZBB8 358 aa13.39□□□□□ -0.27
USP8-209ENST00000560297 CLTAP09496 248 aa13.39□□□□□ -0.27
USP8-209ENST00000560297 ITGA4P13612 1032 aa13.39□□□□□ -0.27
USP8-209ENST00000560297 ATP2A2P16615 1042 aaKnown RBP13.39□□□□□ -0.27
USP8-209ENST00000560297 RPL13P26373 211 aaKnown RBP13.39□□□□□ -0.27
USP8-209ENST00000560297 GRM5P41594 1212 aa13.39□□□□□ -0.27
USP8-209ENST00000560297 C9orf50Q5SZB4 431 aa13.39□□□□□ -0.27
USP8-209ENST00000560297 FOXR2Q6PJQ5 311 aa13.39□□□□□ -0.27
USP8-209ENST00000560297 ZNF598Q86UK7 904 aaKnown RBP13.39□□□□□ -0.27
USP8-209ENST00000560297 CRIPAKQ8N1N5 446 aa13.39□□□□□ -0.27
USP8-209ENST00000560297 SMG8Q8ND04 991 aaKnown RBP13.39□□□□□ -0.27
USP8-209ENST00000560297 ACAP3Q96P50 834 aa13.39□□□□□ -0.27
USP8-209ENST00000560297 TSG101Q99816 390 aa13.39□□□□□ -0.27
USP8-209ENST00000560297 MSTO1Q9BUK6 570 aa13.39□□□□□ -0.27
USP8-209ENST00000560297 CCDC94Q9BW85 323 aaPredicted RBP13.39□□□□□ -0.27
USP8-209ENST00000560297 ANO10Q9NW15 660 aa13.39□□□□□ -0.27
USP8-209ENST00000560297 CXXC1Q9P0U4 656 aaPredicted RBP13.39□□□□□ -0.27
USP8-209ENST00000560297 GIT1Q9Y2X7 761 aa13.39□□□□□ -0.27
USP8-209ENST00000560297 TANC1Q9C0D5 1861 aa13.39□□□□□ -0.27
USP8-209ENST00000560297 MYH11P35749 1972 aa13.39□□□□□ -0.27
USP8-209ENST00000560297 TET1Q8NFU7 2136 aa13.39□□□□□ -0.27
USP8-209ENST00000560297 ZMYM2Q9UBW7 1377 aa13.38□□□□□ -0.27
USP8-209ENST00000560297 CCNE1P24864 410 aa13.38□□□□□ -0.27
USP8-209ENST00000560297 YARSP54577 528 aaKnown RBP13.38□□□□□ -0.27
USP8-209ENST00000560297 LRRC63Q05C16 580 aa13.38□□□□□ -0.27
USP8-209ENST00000560297 NFIL3Q16649 462 aa13.38□□□□□ -0.27
USP8-209ENST00000560297 EDRF1Q3B7T1 1238 aa13.38□□□□□ -0.27
USP8-209ENST00000560297 SLC9A9Q8IVB4 645 aa13.38□□□□□ -0.27
USP8-209ENST00000560297 THNSL1Q8IYQ7 743 aa13.38□□□□□ -0.27
USP8-209ENST00000560297 TDHQ8IZJ6 230 aa13.38□□□□□ -0.27
USP8-209ENST00000560297 P2RX5Q93086 422 aa13.38□□□□□ -0.27
USP8-209ENST00000560297 HAPLN2Q9GZV7 340 aa13.38□□□□□ -0.27
USP8-209ENST00000560297 IKZF4Q9H2S9 585 aa13.38□□□□□ -0.27
USP8-209ENST00000560297 PRO3102Q9H379 93 aa13.38□□□□□ -0.27
USP8-209ENST00000560297 SEMA6BQ9H3T3 888 aa13.38□□□□□ -0.27
USP8-209ENST00000560297 TOPORSQ9NS56 1045 aaPredicted RBP13.38□□□□□ -0.27
USP8-209ENST00000560297 SCN5AQ14524 2016 aa13.37□□□□□ -0.27
USP8-209ENST00000560297 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.37□□□□□ -0.27
USP8-209ENST00000560297 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.37□□□□□ -0.27
USP8-209ENST00000560297 A0A1W2PPC1 479 aa13.37□□□□□ -0.27
USP8-209ENST00000560297 TISP43B9A030 160 aa13.37□□□□□ -0.27
USP8-209ENST00000560297 CLIC2O15247 247 aa13.37□□□□□ -0.27
USP8-209ENST00000560297 EXTL3O43909 919 aa13.37□□□□□ -0.27
USP8-209ENST00000560297 UPP2O95045 317 aa13.37□□□□□ -0.27
USP8-209ENST00000560297 CCDC192P0DO97 292 aa13.37□□□□□ -0.27
USP8-209ENST00000560297 HARSP12081 509 aaKnown RBP13.37□□□□□ -0.27
USP8-209ENST00000560297 CD44P16070 742 aaKnown RBP13.37□□□□□ -0.27
USP8-209ENST00000560297 ATF7P17544 494 aaPredicted RBP13.37□□□□□ -0.27
USP8-209ENST00000560297 ERCC5P28715 1186 aaPredicted RBP13.37□□□□□ -0.27
USP8-209ENST00000560297 DEFB103AP81534 67 aa13.37□□□□□ -0.27
USP8-209ENST00000560297 FKBP3Q00688 224 aaKnown RBP13.37□□□□□ -0.27
USP8-209ENST00000560297 PAK1Q13153 545 aa13.37□□□□□ -0.27
USP8-209ENST00000560297 STX1AQ16623 288 aa13.37□□□□□ -0.27
USP8-209ENST00000560297 ZCWPW2Q504Y3 356 aa13.37□□□□□ -0.27
USP8-209ENST00000560297 PRPF38BQ5VTL8 546 aaKnown RBP13.37□□□□□ -0.27
USP8-209ENST00000560297 KLHL10Q6JEL2 608 aa13.37□□□□□ -0.27
USP8-209ENST00000560297 GLB1LQ6UWU2 654 aa13.37□□□□□ -0.27
USP8-209ENST00000560297 ABI1Q8IZP0 508 aa13.37□□□□□ -0.27
USP8-209ENST00000560297 GPD1LQ8N335 351 aa13.37□□□□□ -0.27
USP8-209ENST00000560297 XXYLT1Q8NBI6 393 aa13.37□□□□□ -0.27
USP8-209ENST00000560297 RNF169Q8NCN4 708 aa13.37□□□□□ -0.27
USP8-209ENST00000560297 NELFBQ8WX92 580 aa13.37□□□□□ -0.27
USP8-209ENST00000560297 TSPAN18Q96SJ8 248 aa13.37□□□□□ -0.27
USP8-209ENST00000560297 CBWD1Q9BRT8 395 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms