RNA–Protein interactions for RNA: ENST00000560097.1

AC104041.1-202, humanhuman

TSL 4 BASIC

Gene AC104041.1, Length 566 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC104041.1-202ENST00000560097 PDE12Q6L8Q7 609 aaKnown RBP12.9□□□□□ -0.34
AC104041.1-202ENST00000560097 RINT1Q6NUQ1 792 aa12.9□□□□□ -0.34
AC104041.1-202ENST00000560097 USP49Q70CQ1 688 aa12.9□□□□□ -0.34
AC104041.1-202ENST00000560097 EXOC8Q8IYI6 725 aa12.9□□□□□ -0.34
AC104041.1-202ENST00000560097 MCPH1Q8NEM0 835 aa12.9□□□□□ -0.34
AC104041.1-202ENST00000560097 CCDC51Q96ER9 411 aa12.9□□□□□ -0.34
AC104041.1-202ENST00000560097 KLHL5Q96PQ7 755 aa12.9□□□□□ -0.34
AC104041.1-202ENST00000560097 CDCA3Q99618 268 aaPredicted RBP12.9□□□□□ -0.34
AC104041.1-202ENST00000560097 SMOC2Q9H3U7 446 aa12.9□□□□□ -0.34
AC104041.1-202ENST00000560097 POMKQ9H5K3 350 aa12.9□□□□□ -0.34
AC104041.1-202ENST00000560097 PTPRHQ9HD43 1115 aa12.9□□□□□ -0.34
AC104041.1-202ENST00000560097 NGRNQ9NPE2 291 aaKnown RBP12.9□□□□□ -0.34
AC104041.1-202ENST00000560097 BLOC1S4Q9NUP1 217 aa12.9□□□□□ -0.34
AC104041.1-202ENST00000560097 SNTG2Q9NY99 539 aa12.9□□□□□ -0.34
AC104041.1-202ENST00000560097 ARHGAP28Q9P2N2 729 aa12.9□□□□□ -0.34
AC104041.1-202ENST00000560097 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.89□□□□□ -0.35
AC104041.1-202ENST00000560097 SFI1A8K8P3 1242 aa12.89□□□□□ -0.35
AC104041.1-202ENST00000560097 ST18O60284 1047 aa12.89□□□□□ -0.35
AC104041.1-202ENST00000560097 GPR37L1O60883 481 aa12.89□□□□□ -0.35
AC104041.1-202ENST00000560097 HIP1RO75146 1068 aa12.89□□□□□ -0.35
AC104041.1-202ENST00000560097 RECQL4O94761 1208 aa12.89□□□□□ -0.35
AC104041.1-202ENST00000560097 SKIP12755 728 aa12.89□□□□□ -0.35
AC104041.1-202ENST00000560097 SP100P23497 879 aaPredicted RBP12.89□□□□□ -0.35
AC104041.1-202ENST00000560097 SSTR3P32745 418 aaPredicted RBP12.89□□□□□ -0.35
AC104041.1-202ENST00000560097 NPTX2P47972 431 aa12.89□□□□□ -0.35
AC104041.1-202ENST00000560097 ALDH7A1P49419 539 aaKnown RBP12.89□□□□□ -0.35
AC104041.1-202ENST00000560097 CLCN4P51793 760 aa12.89□□□□□ -0.35
AC104041.1-202ENST00000560097 SLC12A3P55017 1021 aa12.89□□□□□ -0.35
AC104041.1-202ENST00000560097 SOX4Q06945 474 aaPredicted RBP12.89□□□□□ -0.35
AC104041.1-202ENST00000560097 RESTQ13127 1097 aa12.89□□□□□ -0.35
AC104041.1-202ENST00000560097 TFDP1Q14186 410 aa12.89□□□□□ -0.35
AC104041.1-202ENST00000560097 PTPAQ15257 358 aa12.89□□□□□ -0.35
AC104041.1-202ENST00000560097 KIAA0319Q5VV43 1072 aa12.89□□□□□ -0.35
AC104041.1-202ENST00000560097 MCTP1Q6DN14 999 aa12.89□□□□□ -0.35
AC104041.1-202ENST00000560097 SLC27A1Q6PCB7 646 aa12.89□□□□□ -0.35
AC104041.1-202ENST00000560097 PGBD4Q96DM1 585 aa12.89□□□□□ -0.35
AC104041.1-202ENST00000560097 TMEM169Q96HH4 297 aa12.89□□□□□ -0.35
AC104041.1-202ENST00000560097 FIZ1Q96SL8 496 aa12.89□□□□□ -0.35
AC104041.1-202ENST00000560097 TMEM175Q9BSA9 504 aa12.89□□□□□ -0.35
AC104041.1-202ENST00000560097 HERC2P3Q9BVR0 1158 aa12.89□□□□□ -0.35
AC104041.1-202ENST00000560097 NOL7Q9UMY1 257 aaKnown RBP12.89□□□□□ -0.35
AC104041.1-202ENST00000560097 CITO14578 2027 aa12.88□□□□□ -0.35
AC104041.1-202ENST00000560097 ACKR2O00590 384 aa12.88□□□□□ -0.35
AC104041.1-202ENST00000560097 N4BP1O75113 896 aaKnown RBP12.88□□□□□ -0.35
AC104041.1-202ENST00000560097 MYBP10242 640 aa12.88□□□□□ -0.35
AC104041.1-202ENST00000560097 PROZP22891 400 aa12.88□□□□□ -0.35
AC104041.1-202ENST00000560097 RNASELQ05823 741 aaKnown RBP12.88□□□□□ -0.35
AC104041.1-202ENST00000560097 PCBP1Q15365 356 aaKnown RBP eCLIP12.88□□□□□ -0.35
AC104041.1-202ENST00000560097 HERC4Q5GLZ8 1057 aaPredicted RBP12.88□□□□□ -0.35
AC104041.1-202ENST00000560097 C3orf58Q8NDZ4 430 aa12.88□□□□□ -0.35
AC104041.1-202ENST00000560097 ZBTB45Q96K62 511 aaPredicted RBP12.88□□□□□ -0.35
AC104041.1-202ENST00000560097 PHF7Q9BWX1 381 aaPredicted RBP12.88□□□□□ -0.35
AC104041.1-202ENST00000560097 CDT1Q9H211 546 aa12.88□□□□□ -0.35
AC104041.1-202ENST00000560097 CHST7Q9NS84 486 aa12.88□□□□□ -0.35
AC104041.1-202ENST00000560097 PRMT7Q9NVM4 692 aaPredicted RBP12.88□□□□□ -0.35
AC104041.1-202ENST00000560097 GIT1Q9Y2X7 761 aa12.88□□□□□ -0.35
AC104041.1-202ENST00000560097 ANK1P16157 1881 aa12.88□□□□□ -0.35
AC104041.1-202ENST00000560097 COL4A3Q01955 1670 aa12.87□□□□□ -0.35
AC104041.1-202ENST00000560097 VWA3AA6NCI4 1184 aa12.87□□□□□ -0.35
AC104041.1-202ENST00000560097 C2CD4DB7Z1M9 353 aa12.87□□□□□ -0.35
AC104041.1-202ENST00000560097 ADAM12O43184 909 aa12.87□□□□□ -0.35
AC104041.1-202ENST00000560097 DCXO43602 365 aa12.87□□□□□ -0.35
AC104041.1-202ENST00000560097 KIF4AO95239 1232 aa12.87□□□□□ -0.35
AC104041.1-202ENST00000560097 SOD2P04179 222 aa12.87□□□□□ -0.35
AC104041.1-202ENST00000560097 LIG1P18858 919 aa12.87□□□□□ -0.35
AC104041.1-202ENST00000560097 OR1G1P47890 313 aa12.87□□□□□ -0.35
AC104041.1-202ENST00000560097 PEX3P56589 373 aa12.87□□□□□ -0.35
AC104041.1-202ENST00000560097 KRT17Q04695 432 aa12.87□□□□□ -0.35
AC104041.1-202ENST00000560097 RAD51AP2Q09MP3 1159 aa12.87□□□□□ -0.35
AC104041.1-202ENST00000560097 GNL2Q13823 731 aaKnown RBP12.87□□□□□ -0.35
AC104041.1-202ENST00000560097 RILPL1Q5EBL4 403 aa12.87□□□□□ -0.35
AC104041.1-202ENST00000560097 RTP2Q5QGT7 225 aa12.87□□□□□ -0.35
AC104041.1-202ENST00000560097 RARS2Q5T160 578 aaKnown RBP12.87□□□□□ -0.35
AC104041.1-202ENST00000560097 HAUS3Q68CZ6 603 aa12.87□□□□□ -0.35
AC104041.1-202ENST00000560097 URGCPQ8TCY9 931 aa12.87□□□□□ -0.35
AC104041.1-202ENST00000560097 HASPINQ8TF76 798 aa12.87□□□□□ -0.35
AC104041.1-202ENST00000560097 PRIMPOLQ96LW4 560 aa12.87□□□□□ -0.35
AC104041.1-202ENST00000560097 ZMAT2Q96NC0 199 aaKnown RBP12.87□□□□□ -0.35
AC104041.1-202ENST00000560097 ACO2Q99798 780 aaKnown RBP12.87□□□□□ -0.35
AC104041.1-202ENST00000560097 IKZF4Q9H2S9 585 aa12.87□□□□□ -0.35
AC104041.1-202ENST00000560097 GOLGA2P5Q9HBQ8 144 aa12.87□□□□□ -0.35
AC104041.1-202ENST00000560097 PUF60Q9UHX1 559 aaKnown RBP12.87□□□□□ -0.35
AC104041.1-202ENST00000560097 FAN1Q9Y2M0 1017 aa12.87□□□□□ -0.35
AC104041.1-202ENST00000560097 CLIC4Q9Y696 253 aa12.87□□□□□ -0.35
AC104041.1-202ENST00000560097 ZDBF2Q9HCK1 2354 aa12.86□□□□□ -0.35
AC104041.1-202ENST00000560097 ZMYM2Q9UBW7 1377 aa12.86□□□□□ -0.35
AC104041.1-202ENST00000560097 A0A087X0B3 334 aa12.86□□□□□ -0.35
AC104041.1-202ENST00000560097 CASTOR2A6NHX0 329 aa12.86□□□□□ -0.35
AC104041.1-202ENST00000560097 C2CD2LO14523 706 aa12.86□□□□□ -0.35
AC104041.1-202ENST00000560097 TEX28O15482 410 aa12.86□□□□□ -0.35
AC104041.1-202ENST00000560097 PAPLNO95428 1278 aa12.86□□□□□ -0.35
AC104041.1-202ENST00000560097 RPL17P18621 184 aaKnown RBP12.86□□□□□ -0.35
AC104041.1-202ENST00000560097 DSG1Q02413 1049 aa12.86□□□□□ -0.35
AC104041.1-202ENST00000560097 PRPF4BQ13523 1007 aaKnown RBP12.86□□□□□ -0.35
AC104041.1-202ENST00000560097 XKR4Q5GH76 650 aa12.86□□□□□ -0.35
AC104041.1-202ENST00000560097 GLRA4Q5JXX5 417 aa12.86□□□□□ -0.35
AC104041.1-202ENST00000560097 TMEM31Q5JXX7 168 aa12.86□□□□□ -0.35
AC104041.1-202ENST00000560097 FUT10Q6P4F1 479 aa12.86□□□□□ -0.35
AC104041.1-202ENST00000560097 POTEHQ6S545 545 aa12.86□□□□□ -0.35
AC104041.1-202ENST00000560097 PRSS55Q6UWB4 352 aaPredicted RBP12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms