RNA–Protein interactions for RNA: ENST00000560003.1

SEMA4B-214, Transcript of semaphorin 4B, humanhuman

TSL 3

Gene SEMA4B, Length 566 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-214ENST00000560003 NPTXRO95502 500 aa9.91□□□□□ -0.82
SEMA4B-214ENST00000560003 ITGB1P05556 798 aa9.91□□□□□ -0.82
SEMA4B-214ENST00000560003 LINC00271P0C7V0 271 aa9.91□□□□□ -0.82
SEMA4B-214ENST00000560003 SRGAP2BP0DMP2 458 aa9.91□□□□□ -0.82
SEMA4B-214ENST00000560003 MAPTP10636 758 aaKnown RBP9.91□□□□□ -0.82
SEMA4B-214ENST00000560003 ZNF131P52739 623 aa9.91□□□□□ -0.82
SEMA4B-214ENST00000560003 GRIN1Q05586 938 aa9.91□□□□□ -0.82
SEMA4B-214ENST00000560003 RAD51AP2Q09MP3 1159 aa9.91□□□□□ -0.82
SEMA4B-214ENST00000560003 PUS10Q3MIT2 529 aaKnown RBP9.91□□□□□ -0.82
SEMA4B-214ENST00000560003 FOXD4L6Q3SYB3 417 aaPredicted RBP9.91□□□□□ -0.82
SEMA4B-214ENST00000560003 LONRF3Q496Y0 759 aa9.91□□□□□ -0.82
SEMA4B-214ENST00000560003 FOXD4L3Q6VB84 417 aaPredicted RBP9.91□□□□□ -0.82
SEMA4B-214ENST00000560003 AGMOQ6ZNB7 445 aa9.91□□□□□ -0.82
SEMA4B-214ENST00000560003 LRRC55Q6ZSA7 311 aa9.91□□□□□ -0.82
SEMA4B-214ENST00000560003 STXBP4Q6ZWJ1 553 aa9.91□□□□□ -0.82
SEMA4B-214ENST00000560003 FAM178BQ8IXR5 827 aa9.91□□□□□ -0.82
SEMA4B-214ENST00000560003 DAW1Q8N136 415 aa9.91□□□□□ -0.82
SEMA4B-214ENST00000560003 SMG8Q8ND04 991 aaKnown RBP9.91□□□□□ -0.82
SEMA4B-214ENST00000560003 TMEM161BQ8NDZ6 487 aa9.91□□□□□ -0.82
SEMA4B-214ENST00000560003 POF1BQ8WVV4 589 aa9.91□□□□□ -0.82
SEMA4B-214ENST00000560003 KCNN1Q92952 543 aa9.91□□□□□ -0.82
SEMA4B-214ENST00000560003 LPPQ93052 612 aa9.91□□□□□ -0.82
SEMA4B-214ENST00000560003 BICD1Q96G01 975 aa9.91□□□□□ -0.82
SEMA4B-214ENST00000560003 CCDC34Q96HJ3 373 aa9.91□□□□□ -0.82
SEMA4B-214ENST00000560003 CDCA3Q99618 268 aaPredicted RBP9.91□□□□□ -0.82
SEMA4B-214ENST00000560003 ACO2Q99798 780 aaKnown RBP9.91□□□□□ -0.82
SEMA4B-214ENST00000560003 CCDC94Q9BW85 323 aaPredicted RBP9.91□□□□□ -0.82
SEMA4B-214ENST00000560003 EIF2AQ9BY44 585 aaKnown RBP9.91□□□□□ -0.82
SEMA4B-214ENST00000560003 PDZD7Q9H5P4 517 aa9.91□□□□□ -0.82
SEMA4B-214ENST00000560003 POLD4Q9HCU8 107 aa9.91□□□□□ -0.82
SEMA4B-214ENST00000560003 ALG13Q9NP73 1137 aaKnown RBP9.91□□□□□ -0.82
SEMA4B-214ENST00000560003 TLR9Q9NR96 1032 aa9.91□□□□□ -0.82
SEMA4B-214ENST00000560003 BLOC1S4Q9NUP1 217 aa9.91□□□□□ -0.82
SEMA4B-214ENST00000560003 RNF19AQ9NV58 838 aa9.91□□□□□ -0.82
SEMA4B-214ENST00000560003 TBC1D13Q9NVG8 400 aa9.91□□□□□ -0.82
SEMA4B-214ENST00000560003 THEGQ9P2T0 379 aa9.91□□□□□ -0.82
SEMA4B-214ENST00000560003 FAM50BQ9Y247 325 aa9.91□□□□□ -0.82
SEMA4B-214ENST00000560003 FAN1Q9Y2M0 1017 aa9.91□□□□□ -0.82
SEMA4B-214ENST00000560003 CHD7Q9P2D1 2997 aa9.91□□□□□ -0.82
SEMA4B-214ENST00000560003 EVPLQ92817 2033 aa9.9□□□□□ -0.82
SEMA4B-214ENST00000560003 CLDN3O15551 220 aa9.9□□□□□ -0.82
SEMA4B-214ENST00000560003 ZC3H11AO75152 810 aaKnown RBP eCLIP9.9□□□□□ -0.82
SEMA4B-214ENST00000560003 POMCP01189 267 aa9.9□□□□□ -0.82
SEMA4B-214ENST00000560003 GALTP07902 379 aa9.9□□□□□ -0.82
SEMA4B-214ENST00000560003 MCF2P10911 925 aa9.9□□□□□ -0.82
SEMA4B-214ENST00000560003 DNM1Q05193 864 aaKnown RBP9.9□□□□□ -0.82
SEMA4B-214ENST00000560003 MAPK7Q13164 816 aa9.9□□□□□ -0.82
SEMA4B-214ENST00000560003 ALCAMQ13740 583 aa9.9□□□□□ -0.82
SEMA4B-214ENST00000560003 NT5DC1Q5TFE4 455 aa9.9□□□□□ -0.82
SEMA4B-214ENST00000560003 SLFN12LQ6IEE8 588 aa9.9□□□□□ -0.82
SEMA4B-214ENST00000560003 USP49Q70CQ1 688 aa9.9□□□□□ -0.82
SEMA4B-214ENST00000560003 TMC7Q7Z402 723 aa9.9□□□□□ -0.82
SEMA4B-214ENST00000560003 HAUS6Q7Z4H7 955 aa9.9□□□□□ -0.82
SEMA4B-214ENST00000560003 SPRED2Q7Z698 418 aa9.9□□□□□ -0.82
SEMA4B-214ENST00000560003 CCDC65Q8IXS2 484 aa9.9□□□□□ -0.82
SEMA4B-214ENST00000560003 SLC39A11Q8N1S5 342 aa9.9□□□□□ -0.82
SEMA4B-214ENST00000560003 DDX12PQ92771 950 aa9.9□□□□□ -0.82
SEMA4B-214ENST00000560003 SPATA32Q96LK8 384 aa9.9□□□□□ -0.82
SEMA4B-214ENST00000560003 TSPAN18Q96SJ8 248 aa9.9□□□□□ -0.82
SEMA4B-214ENST00000560003 GAD1Q99259 594 aa9.9□□□□□ -0.82
SEMA4B-214ENST00000560003 REEP2Q9BRK0 252 aa9.9□□□□□ -0.82
SEMA4B-214ENST00000560003 KIFC3Q9BVG8 833 aa9.9□□□□□ -0.82
SEMA4B-214ENST00000560003 APOL6Q9BWW8 343 aa9.9□□□□□ -0.82
SEMA4B-214ENST00000560003 PANK2Q9BZ23 570 aa9.9□□□□□ -0.82
SEMA4B-214ENST00000560003 TNMDQ9H2S6 317 aa9.9□□□□□ -0.82
SEMA4B-214ENST00000560003 TLE6Q9H808 572 aa9.9□□□□□ -0.82
SEMA4B-214ENST00000560003 USP25Q9UHP3 1055 aa9.9□□□□□ -0.82
SEMA4B-214ENST00000560003 EXOC7Q9UPT5 735 aa9.9□□□□□ -0.82
SEMA4B-214ENST00000560003 TRANK1O15050 2925 aa9.89□□□□□ -0.83
SEMA4B-214ENST00000560003 COL6A3P12111 3177 aa9.89□□□□□ -0.83
SEMA4B-214ENST00000560003 MICAL3Q7RTP6 2002 aa9.89□□□□□ -0.83
SEMA4B-214ENST00000560003 NPHP3-ACAD11A0A0J9YXS1 232 aa9.89□□□□□ -0.83
SEMA4B-214ENST00000560003 THP07101 528 aa9.89□□□□□ -0.83
SEMA4B-214ENST00000560003 CMA1P23946 247 aa9.89□□□□□ -0.83
SEMA4B-214ENST00000560003 AKAP5P24588 427 aa9.89□□□□□ -0.83
SEMA4B-214ENST00000560003 GRM5P41594 1212 aa9.89□□□□□ -0.83
SEMA4B-214ENST00000560003 MATR3P43243 847 aaKnown RBP eCLIP9.89□□□□□ -0.83
SEMA4B-214ENST00000560003 LIG4P49917 911 aa9.89□□□□□ -0.83
SEMA4B-214ENST00000560003 NCKAP1LP55160 1127 aa9.89□□□□□ -0.83
SEMA4B-214ENST00000560003 GRIK3Q13003 919 aa9.89□□□□□ -0.83
SEMA4B-214ENST00000560003 HSP90AA2PQ14568 343 aaPredicted RBP9.89□□□□□ -0.83
SEMA4B-214ENST00000560003 SMC1AQ14683 1233 aaKnown RBP9.89□□□□□ -0.83
SEMA4B-214ENST00000560003 POSTNQ15063 836 aa9.89□□□□□ -0.83
SEMA4B-214ENST00000560003 ZNF568Q3ZCX4 644 aa9.89□□□□□ -0.83
SEMA4B-214ENST00000560003 HERC4Q5GLZ8 1057 aaPredicted RBP9.89□□□□□ -0.83
SEMA4B-214ENST00000560003 ADALQ6DHV7 355 aa9.89□□□□□ -0.83
SEMA4B-214ENST00000560003 MPZL3Q6UWV2 235 aa9.89□□□□□ -0.83
SEMA4B-214ENST00000560003 DDX53Q86TM3 631 aaKnown RBP9.89□□□□□ -0.83
SEMA4B-214ENST00000560003 CEP57L1Q8IYX8 460 aa9.89□□□□□ -0.83
SEMA4B-214ENST00000560003 HVCN1Q96D96 273 aa9.89□□□□□ -0.83
SEMA4B-214ENST00000560003 PABPC5Q96DU9 382 aaKnown RBP9.89□□□□□ -0.83
SEMA4B-214ENST00000560003 IGSF21Q96ID5 467 aa9.89□□□□□ -0.83
SEMA4B-214ENST00000560003 ACAP3Q96P50 834 aa9.89□□□□□ -0.83
SEMA4B-214ENST00000560003 ASB2Q96Q27 587 aa9.89□□□□□ -0.83
SEMA4B-214ENST00000560003 TARS2Q9BW92 718 aaKnown RBP9.89□□□□□ -0.83
SEMA4B-214ENST00000560003 GBP3Q9H0R5 595 aa9.89□□□□□ -0.83
SEMA4B-214ENST00000560003 NXF3Q9H4D5 531 aaKnown RBP9.89□□□□□ -0.83
SEMA4B-214ENST00000560003 ST6GALNAC4Q9H4F1 302 aa9.89□□□□□ -0.83
SEMA4B-214ENST00000560003 NRDE2Q9H7Z3 1164 aa9.89□□□□□ -0.83
SEMA4B-214ENST00000560003 MRPL44Q9H9J2 332 aaKnown RBP9.89□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms