RNA–Protein interactions for RNA: ENST00000559931.5

SMAD6-204, Transcript of SMAD family member 6, humanhuman

TSL 3

Gene SMAD6, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-204ENST00000559931 GDF15Q99988 308 aa15.67■□□□□ 0.1
SMAD6-204ENST00000559931 APOL6Q9BWW8 343 aa15.67■□□□□ 0.1
SMAD6-204ENST00000559931 UBE2OQ9C0C9 1292 aaKnown RBP15.67■□□□□ 0.1
SMAD6-204ENST00000559931 NAT10Q9H0A0 1025 aaKnown RBP15.67■□□□□ 0.1
SMAD6-204ENST00000559931 TSPYL2Q9H2G4 693 aaPredicted RBP15.67■□□□□ 0.1
SMAD6-204ENST00000559931 KCTD10Q9H3F6 313 aa15.67■□□□□ 0.1
SMAD6-204ENST00000559931 SEMA6BQ9H3T3 888 aa15.67■□□□□ 0.1
SMAD6-204ENST00000559931 AGPAT3Q9NRZ7 376 aa15.67■□□□□ 0.1
SMAD6-204ENST00000559931 FAM105AQ9NUU6 356 aa15.67■□□□□ 0.1
SMAD6-204ENST00000559931 AGO2Q9UKV8 859 aaKnown RBP15.67■□□□□ 0.1
SMAD6-204ENST00000559931 LRFN2Q9ULH4 789 aa15.67■□□□□ 0.1
SMAD6-204ENST00000559931 PCDHB2Q9Y5E7 798 aa15.67■□□□□ 0.1
SMAD6-204ENST00000559931 ZMYM2Q9UBW7 1377 aa15.66■□□□□ 0.1
SMAD6-204ENST00000559931 A0A0B4J269 797 aa15.66■□□□□ 0.1
SMAD6-204ENST00000559931 BAIAP3O94812 1187 aa15.66■□□□□ 0.1
SMAD6-204ENST00000559931 AMHP03971 560 aa15.66■□□□□ 0.1
SMAD6-204ENST00000559931 GARTP22102 1010 aa15.66■□□□□ 0.1
SMAD6-204ENST00000559931 RPL13P26373 211 aaKnown RBP15.66■□□□□ 0.1
SMAD6-204ENST00000559931 RAB27AP51159 221 aa15.66■□□□□ 0.1
SMAD6-204ENST00000559931 MCL1Q07820 350 aa15.66■□□□□ 0.1
SMAD6-204ENST00000559931 TPD52L1Q16890 204 aaPredicted RBP15.66■□□□□ 0.1
SMAD6-204ENST00000559931 TMEM240Q5SV17 173 aa15.66■□□□□ 0.1
SMAD6-204ENST00000559931 UBXN11Q5T124 520 aa15.66■□□□□ 0.1
SMAD6-204ENST00000559931 ANKRD40Q6AI12 368 aa15.66■□□□□ 0.1
SMAD6-204ENST00000559931 CENPPQ6IPU0 288 aa15.66■□□□□ 0.1
SMAD6-204ENST00000559931 VWCEQ96DN2 955 aa15.66■□□□□ 0.1
SMAD6-204ENST00000559931 BUD13Q9BRD0 619 aaKnown RBP eCLIP15.66■□□□□ 0.14e-7■□□□□ 9
SMAD6-204ENST00000559931 CBWD1Q9BRT8 395 aa15.66■□□□□ 0.1
SMAD6-204ENST00000559931 CDT1Q9H211 546 aa15.66■□□□□ 0.1
SMAD6-204ENST00000559931 MTIF3Q9H2K0 278 aaKnown RBP15.66■□□□□ 0.1
SMAD6-204ENST00000559931 PTPRHQ9HD43 1115 aa15.66■□□□□ 0.1
SMAD6-204ENST00000559931 RNF216Q9NWF9 866 aaPredicted RBP15.66■□□□□ 0.1
SMAD6-204ENST00000559931 PARP2Q9UGN5 583 aa15.66■□□□□ 0.1
SMAD6-204ENST00000559931 PCDHB7Q9Y5E2 793 aa15.66■□□□□ 0.1
SMAD6-204ENST00000559931 MICAL3Q7RTP6 2002 aa15.65■□□□□ 0.1
SMAD6-204ENST00000559931 A0A0U1RQF3 1178 aa15.65■□□□□ 0.1
SMAD6-204ENST00000559931 GOLGA8IPA6NC78 632 aa15.65■□□□□ 0.1
SMAD6-204ENST00000559931 TRIM49BA6NDI0 452 aa15.65■□□□□ 0.1
SMAD6-204ENST00000559931 GOLGA8JA6NMD2 632 aa15.65■□□□□ 0.1
SMAD6-204ENST00000559931 EXOC3O60645 756 aa15.65■□□□□ 0.1
SMAD6-204ENST00000559931 UPP2O95045 317 aa15.65■□□□□ 0.1
SMAD6-204ENST00000559931 NR3C1P04150 777 aa15.65■□□□□ 0.1
SMAD6-204ENST00000559931 ITGA4P13612 1032 aa15.65■□□□□ 0.1
SMAD6-204ENST00000559931 PROZP22891 400 aa15.65■□□□□ 0.1
SMAD6-204ENST00000559931 ADSSP30520 456 aa15.65■□□□□ 0.1
SMAD6-204ENST00000559931 ADAM9Q13443 819 aa15.65■□□□□ 0.1
SMAD6-204ENST00000559931 ANO6Q4KMQ2 910 aa15.65■□□□□ 0.1
SMAD6-204ENST00000559931 SEZ6Q53EL9 994 aa15.65■□□□□ 0.1
SMAD6-204ENST00000559931 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.65■□□□□ 0.1
SMAD6-204ENST00000559931 ECHDC2Q86YB7 292 aa15.65■□□□□ 0.1
SMAD6-204ENST00000559931 LINC01599Q8WXQ3 324 aa15.65■□□□□ 0.1
SMAD6-204ENST00000559931 PGBD4Q96DM1 585 aa15.65■□□□□ 0.1
SMAD6-204ENST00000559931 SAAL1Q96ER3 474 aa15.65■□□□□ 0.1
SMAD6-204ENST00000559931 FAM213AQ9BRX8 229 aa15.65■□□□□ 0.1
SMAD6-204ENST00000559931 CCDC94Q9BW85 323 aaPredicted RBP15.65■□□□□ 0.1
SMAD6-204ENST00000559931 DNAJC25Q9H1X3 360 aa15.65■□□□□ 0.1
SMAD6-204ENST00000559931 HSPBP1Q9NZL4 362 aa15.65■□□□□ 0.1
SMAD6-204ENST00000559931 RWDD2AQ9UIY3 292 aa15.65■□□□□ 0.1
SMAD6-204ENST00000559931 COLQQ9Y215 455 aaPredicted RBP15.65■□□□□ 0.1
SMAD6-204ENST00000559931 TRAF3IP3Q9Y228 551 aa15.65■□□□□ 0.1
SMAD6-204ENST00000559931 HES2Q9Y543 173 aa15.65■□□□□ 0.1
SMAD6-204ENST00000559931 IPPQ9Y573 584 aa15.65■□□□□ 0.1
SMAD6-204ENST00000559931 STYXL1Q9Y6J8 313 aa15.65■□□□□ 0.1
SMAD6-204ENST00000559931 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.64■□□□□ 0.09
SMAD6-204ENST00000559931 C9IYK1 514 aa15.64■□□□□ 0.09
SMAD6-204ENST00000559931 KIAA0391O15091 583 aaKnown RBP15.64■□□□□ 0.09
SMAD6-204ENST00000559931 OGTO15294 1046 aa15.64■□□□□ 0.09
SMAD6-204ENST00000559931 LDHAP00338 332 aaKnown RBP15.64■□□□□ 0.09
SMAD6-204ENST00000559931 STAG3L1P0CL83 205 aa15.64■□□□□ 0.09
SMAD6-204ENST00000559931 NR2F2P24468 414 aa15.64■□□□□ 0.09
SMAD6-204ENST00000559931 ERCC5P28715 1186 aaPredicted RBP15.64■□□□□ 0.09
SMAD6-204ENST00000559931 ACOT2P49753 483 aa15.64■□□□□ 0.09
SMAD6-204ENST00000559931 PMS1P54277 932 aaKnown RBP15.64■□□□□ 0.09
SMAD6-204ENST00000559931 YARSP54577 528 aaKnown RBP15.64■□□□□ 0.09
SMAD6-204ENST00000559931 LRRC63Q05C16 580 aa15.64■□□□□ 0.09
SMAD6-204ENST00000559931 HSP90AA2PQ14568 343 aaPredicted RBP15.64■□□□□ 0.09
SMAD6-204ENST00000559931 KYAT1Q16773 422 aa15.64■□□□□ 0.09
SMAD6-204ENST00000559931 CT47A1Q5JQC4 288 aaPredicted RBP15.64■□□□□ 0.09
SMAD6-204ENST00000559931 CEP135Q66GS9 1140 aa15.64■□□□□ 0.09
SMAD6-204ENST00000559931 XXYLT1Q8NBI6 393 aa15.64■□□□□ 0.09
SMAD6-204ENST00000559931 RDH13Q8NBN7 331 aa15.64■□□□□ 0.09
SMAD6-204ENST00000559931 FAM212AQ96EL1 285 aa15.64■□□□□ 0.09
SMAD6-204ENST00000559931 ACAP3Q96P50 834 aa15.64■□□□□ 0.09
SMAD6-204ENST00000559931 TRAIPQ9BWF2 469 aa15.64■□□□□ 0.09
SMAD6-204ENST00000559931 HAPLN2Q9GZV7 340 aa15.64■□□□□ 0.09
SMAD6-204ENST00000559931 NXF3Q9H4D5 531 aaKnown RBP15.64■□□□□ 0.09
SMAD6-204ENST00000559931 SNTG2Q9NY99 539 aa15.64■□□□□ 0.09
SMAD6-204ENST00000559931 FRMD4BQ9Y2L6 1034 aa15.64■□□□□ 0.09
SMAD6-204ENST00000559931 SLC4A7Q9Y6M7 1214 aa15.64■□□□□ 0.09
SMAD6-204ENST00000559931 ABLIM1O14639 778 aa15.63■□□□□ 0.09
SMAD6-204ENST00000559931 CETN3O15182 167 aa15.63■□□□□ 0.09
SMAD6-204ENST00000559931 EXTL3O43909 919 aa15.63■□□□□ 0.09
SMAD6-204ENST00000559931 ZNF623O75123 536 aa15.63■□□□□ 0.09
SMAD6-204ENST00000559931 FGFR1OPO95684 399 aaKnown RBP15.63■□□□□ 0.09
SMAD6-204ENST00000559931 EOMESO95936 686 aa15.63■□□□□ 0.09
SMAD6-204ENST00000559931 CLTAP09496 248 aa15.63■□□□□ 0.09
SMAD6-204ENST00000559931 AKAP5P24588 427 aa15.63■□□□□ 0.09
SMAD6-204ENST00000559931 GRM5P41594 1212 aa15.63■□□□□ 0.09
SMAD6-204ENST00000559931 WDR5P61964 334 aaKnown RBP15.63■□□□□ 0.09
SMAD6-204ENST00000559931 FAM189BP81408 668 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms