RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 TSGA10Q9BZW7 698 aa13.76□□□□□ -0.21
USP3-213ENST00000559711 GPR88Q9GZN0 384 aa13.76□□□□□ -0.21
USP3-213ENST00000559711 LACRTQ9GZZ8 138 aa13.76□□□□□ -0.21
USP3-213ENST00000559711 Q9Y3F1 56 aa13.76□□□□□ -0.21
USP3-213ENST00000559711 UQCRHLA0A096LP55 91 aa13.75□□□□□ -0.21
USP3-213ENST00000559711 TTLL13PA6NNM8 815 aa13.75□□□□□ -0.21
USP3-213ENST00000559711 ACKR2O00590 384 aa13.75□□□□□ -0.21
USP3-213ENST00000559711 CLDN3O15551 220 aa13.75□□□□□ -0.21
USP3-213ENST00000559711 PJA2O43164 708 aa13.75□□□□□ -0.21
USP3-213ENST00000559711 ECM2O94769 699 aaPredicted RBP13.75□□□□□ -0.21
USP3-213ENST00000559711 ALDH1A1P00352 501 aa13.75□□□□□ -0.21
USP3-213ENST00000559711 UQCRHP07919 91 aa13.75□□□□□ -0.21
USP3-213ENST00000559711 GJB1P08034 283 aa13.75□□□□□ -0.21
USP3-213ENST00000559711 CTGFP29279 349 aa13.75□□□□□ -0.21
USP3-213ENST00000559711 SOX5P35711 763 aa13.75□□□□□ -0.21
USP3-213ENST00000559711 GPC3P51654 580 aa13.75□□□□□ -0.21
USP3-213ENST00000559711 IGBP1P78318 339 aa13.75□□□□□ -0.21
USP3-213ENST00000559711 ARID5AQ03989 594 aa13.75□□□□□ -0.21
USP3-213ENST00000559711 PTK2Q05397 1052 aa13.75□□□□□ -0.21
USP3-213ENST00000559711 KIF5AQ12840 1032 aa13.75□□□□□ -0.21
USP3-213ENST00000559711 DRAP1Q14919 205 aaPredicted RBP13.75□□□□□ -0.21
USP3-213ENST00000559711 SLC18A3Q16572 532 aa13.75□□□□□ -0.21
USP3-213ENST00000559711 ZNF569Q5MCW4 686 aa13.75□□□□□ -0.21
USP3-213ENST00000559711 CCDC122Q5T0U0 273 aa13.75□□□□□ -0.21
USP3-213ENST00000559711 MTHFD1LQ6UB35 978 aa13.75□□□□□ -0.21
USP3-213ENST00000559711 C15orf39Q6ZRI6 1047 aa13.75□□□□□ -0.21
USP3-213ENST00000559711 SV2AQ7L0J3 742 aa13.75□□□□□ -0.21
USP3-213ENST00000559711 GPIHBP1Q8IV16 184 aa13.75□□□□□ -0.21
USP3-213ENST00000559711 JAKMIP2Q96AA8 810 aa13.75□□□□□ -0.21
USP3-213ENST00000559711 ZBTB10Q96DT7 871 aa13.75□□□□□ -0.21
USP3-213ENST00000559711 IFIH1Q9BYX4 1025 aaKnown RBP13.75□□□□□ -0.21
USP3-213ENST00000559711 TRIM10Q9UDY6 481 aa13.75□□□□□ -0.21
USP3-213ENST00000559711 ABLIM1O14639 778 aa13.75□□□□□ -0.21
USP3-213ENST00000559711 FAM189A1O60320 539 aa13.75□□□□□ -0.21
USP3-213ENST00000559711 PROZP22891 400 aa13.75□□□□□ -0.21
USP3-213ENST00000559711 TMOD1P28289 359 aa13.75□□□□□ -0.21
USP3-213ENST00000559711 MAGEA1P43355 309 aa13.75□□□□□ -0.21
USP3-213ENST00000559711 ACOT2P49753 483 aa13.75□□□□□ -0.21
USP3-213ENST00000559711 MAP2K1Q02750 393 aaPredicted RBP13.75□□□□□ -0.21
USP3-213ENST00000559711 GFPT1Q06210 699 aaPredicted RBP13.75□□□□□ -0.21
USP3-213ENST00000559711 MCL1Q07820 350 aa13.75□□□□□ -0.21
USP3-213ENST00000559711 PPFIA1Q13136 1202 aa13.75□□□□□ -0.21
USP3-213ENST00000559711 GRIK4Q16099 956 aa13.75□□□□□ -0.21
USP3-213ENST00000559711 FAM187BQ17R55 369 aa13.75□□□□□ -0.21
USP3-213ENST00000559711 MARCH8Q5T0T0 291 aa13.75□□□□□ -0.21
USP3-213ENST00000559711 TSHZ1Q6ZSZ6 1077 aa13.75□□□□□ -0.21
USP3-213ENST00000559711 ZNF571Q7Z3V5 609 aaPredicted RBP13.75□□□□□ -0.21
USP3-213ENST00000559711 TXLNBQ8N3L3 684 aa13.75□□□□□ -0.21
USP3-213ENST00000559711 FBXL13Q8NEE6 735 aa13.75□□□□□ -0.21
USP3-213ENST00000559711 SEMA4DQ92854 862 aa13.75□□□□□ -0.21
USP3-213ENST00000559711 NLRP4Q96MN2 994 aa13.75□□□□□ -0.21
USP3-213ENST00000559711 IFT122Q9HBG6 1241 aa13.75□□□□□ -0.21
USP3-213ENST00000559711 PTPRHQ9HD43 1115 aa13.75□□□□□ -0.21
USP3-213ENST00000559711 TOPORSQ9NS56 1045 aaPredicted RBP13.75□□□□□ -0.21
USP3-213ENST00000559711 GUCA1BQ9UMX6 200 aa13.75□□□□□ -0.21
USP3-213ENST00000559711 A0A087X0T9 212 aa13.74□□□□□ -0.21
USP3-213ENST00000559711 RRN3P2A6NIE6 340 aa13.74□□□□□ -0.21
USP3-213ENST00000559711 LRRN2O75325 713 aa13.74□□□□□ -0.21
USP3-213ENST00000559711 GFPT2O94808 682 aa13.74□□□□□ -0.21
USP3-213ENST00000559711 TOMM70O94826 608 aa13.74□□□□□ -0.21
USP3-213ENST00000559711 F2P00734 622 aa13.74□□□□□ -0.21
USP3-213ENST00000559711 CCDC172P0C7W6 258 aa13.74□□□□□ -0.21
USP3-213ENST00000559711 FAM228BP0C875 321 aa13.74□□□□□ -0.21
USP3-213ENST00000559711 DLATP10515 647 aaKnown RBP13.74□□□□□ -0.21
USP3-213ENST00000559711 MBTD1Q05BQ5 628 aa13.74□□□□□ -0.21
USP3-213ENST00000559711 CYP4F22Q6NT55 531 aa13.74□□□□□ -0.21
USP3-213ENST00000559711 TLK2Q86UE8 772 aa13.74□□□□□ -0.21
USP3-213ENST00000559711 ARHGEF19Q8IW93 802 aa13.74□□□□□ -0.21
USP3-213ENST00000559711 SLC35F6Q8N357 371 aa13.74□□□□□ -0.21
USP3-213ENST00000559711 ZNF516Q92618 1163 aa13.74□□□□□ -0.21
USP3-213ENST00000559711 KAT2BQ92831 832 aa13.74□□□□□ -0.21
USP3-213ENST00000559711 FNBP1Q96RU3 617 aa13.74□□□□□ -0.21
USP3-213ENST00000559711 UBE2TQ9NPD8 197 aaPredicted RBP13.74□□□□□ -0.21
USP3-213ENST00000559711 RAB20Q9NX57 234 aa13.74□□□□□ -0.21
USP3-213ENST00000559711 RBAKQ9NYW8 714 aaPredicted RBP13.74□□□□□ -0.21
USP3-213ENST00000559711 ANKFY1Q9P2R3 1169 aa13.74□□□□□ -0.21
USP3-213ENST00000559711 ADAMTS1Q9UHI8 967 aa13.74□□□□□ -0.21
USP3-213ENST00000559711 TFR2Q9UP52 801 aa13.74□□□□□ -0.21
USP3-213ENST00000559711 CNTNAP2Q9UHC6 1331 aa13.73□□□□□ -0.21
USP3-213ENST00000559711 CTIFO43310 598 aaKnown RBP13.73□□□□□ -0.21
USP3-213ENST00000559711 EVI5O60447 810 aa13.73□□□□□ -0.21
USP3-213ENST00000559711 MATR3P43243 847 aaKnown RBP eCLIP13.73□□□□□ -0.21
USP3-213ENST00000559711 PHKA2P46019 1235 aa13.73□□□□□ -0.21
USP3-213ENST00000559711 FCGRTP55899 365 aa13.73□□□□□ -0.21
USP3-213ENST00000559711 WNT7BP56706 349 aa13.73□□□□□ -0.21
USP3-213ENST00000559711 NOGQ13253 232 aa13.73□□□□□ -0.21
USP3-213ENST00000559711 GRM1Q13255 1194 aa13.73□□□□□ -0.21
USP3-213ENST00000559711 ZACNQ401N2 412 aa13.73□□□□□ -0.21
USP3-213ENST00000559711 ZBTB41Q5SVQ8 909 aa13.73□□□□□ -0.21
USP3-213ENST00000559711 C10orf76Q5T2E6 689 aa13.73□□□□□ -0.21
USP3-213ENST00000559711 TAS1R2Q8TE23 839 aa13.73□□□□□ -0.21
USP3-213ENST00000559711 SYT11Q9BT88 431 aa13.73□□□□□ -0.21
USP3-213ENST00000559711 MINDY3Q9H8M7 445 aa13.73□□□□□ -0.21
USP3-213ENST00000559711 LUC7LQ9NQ29 371 aaKnown RBP13.73□□□□□ -0.21
USP3-213ENST00000559711 PRMT7Q9NVM4 692 aaPredicted RBP13.73□□□□□ -0.21
USP3-213ENST00000559711 NENFQ9UMX5 172 aa13.73□□□□□ -0.21
USP3-213ENST00000559711 DUSP10Q9Y6W6 482 aa13.73□□□□□ -0.21
USP3-213ENST00000559711 SIP14410 1827 aa13.73□□□□□ -0.21
USP3-213ENST00000559711 INO80B-WBP1J3KQ70 363 aa13.72□□□□□ -0.21
USP3-213ENST00000559711 FOXN3O00409 490 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms