RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 RRP1BQ14684 758 aaKnown RBP11.42□□□□□ -0.58
CARMIL3-202ENST00000559694 SNRNP35Q16560 246 aaKnown RBP11.42□□□□□ -0.58
CARMIL3-202ENST00000559694 SEZ6Q53EL9 994 aa11.42□□□□□ -0.58
CARMIL3-202ENST00000559694 GLB1LQ6UWU2 654 aa11.42□□□□□ -0.58
CARMIL3-202ENST00000559694 NIPA1Q7RTP0 329 aa11.42□□□□□ -0.58
CARMIL3-202ENST00000559694 CACNA2D3Q8IZS8 1091 aa11.42□□□□□ -0.58
CARMIL3-202ENST00000559694 FRMD3A2A2Y4 597 aa11.41□□□□□ -0.58
CARMIL3-202ENST00000559694 ITGB5P18084 799 aa11.41□□□□□ -0.58
CARMIL3-202ENST00000559694 CALCOCO2Q13137 446 aa11.41□□□□□ -0.58
CARMIL3-202ENST00000559694 SIX6OS1Q8N1H7 587 aa11.41□□□□□ -0.58
CARMIL3-202ENST00000559694 SLC5A5Q92911 643 aa11.41□□□□□ -0.58
CARMIL3-202ENST00000559694 BTBD7Q9P203 1132 aa11.41□□□□□ -0.58
CARMIL3-202ENST00000559694 CPSF2Q9P2I0 782 aaKnown RBP11.41□□□□□ -0.58
CARMIL3-202ENST00000559694 PIK3CDO00329 1044 aa11.41□□□□□ -0.58
CARMIL3-202ENST00000559694 SOCS7O14512 581 aa11.41□□□□□ -0.58
CARMIL3-202ENST00000559694 PQBP1O60828 265 aaKnown RBP11.41□□□□□ -0.58
CARMIL3-202ENST00000559694 PLA2G4AP47712 749 aa11.41□□□□□ -0.58
CARMIL3-202ENST00000559694 NPTX2P47972 431 aa11.41□□□□□ -0.58
CARMIL3-202ENST00000559694 RARRES1P49788 294 aa11.41□□□□□ -0.58
CARMIL3-202ENST00000559694 LLGL1Q15334 1064 aa11.41□□□□□ -0.58
CARMIL3-202ENST00000559694 REPS2Q8NFH8 660 aa11.41□□□□□ -0.58
CARMIL3-202ENST00000559694 PGBD4Q96DM1 585 aa11.41□□□□□ -0.58
CARMIL3-202ENST00000559694 PANX2Q96RD6 677 aa11.41□□□□□ -0.58
CARMIL3-202ENST00000559694 MTG1Q9BT17 334 aaPredicted RBP11.41□□□□□ -0.58
CARMIL3-202ENST00000559694 SLITRK6Q9H5Y7 841 aa11.41□□□□□ -0.58
CARMIL3-202ENST00000559694 C17orf75Q9HAS0 396 aa11.41□□□□□ -0.58
CARMIL3-202ENST00000559694 HYOU1Q9Y4L1 999 aa11.41□□□□□ -0.58
CARMIL3-202ENST00000559694 MRFAP1Q9Y605 127 aa11.41□□□□□ -0.58
CARMIL3-202ENST00000559694 FAM169AQ9Y6X4 670 aa11.41□□□□□ -0.58
CARMIL3-202ENST00000559694 A0A087WZ62 844 aa11.41□□□□□ -0.58
CARMIL3-202ENST00000559694 KPNA6O60684 536 aa11.41□□□□□ -0.58
CARMIL3-202ENST00000559694 PPP1R11O60927 126 aaPredicted RBP11.41□□□□□ -0.58
CARMIL3-202ENST00000559694 ATP9AO75110 1047 aa11.41□□□□□ -0.58
CARMIL3-202ENST00000559694 CYP3A4P08684 503 aa11.41□□□□□ -0.58
CARMIL3-202ENST00000559694 ITGA4P13612 1032 aa11.41□□□□□ -0.58
CARMIL3-202ENST00000559694 TCP1P17987 556 aaKnown RBP11.41□□□□□ -0.58
CARMIL3-202ENST00000559694 KRT81Q14533 505 aa11.41□□□□□ -0.58
CARMIL3-202ENST00000559694 E2F5Q15329 346 aa11.41□□□□□ -0.58
CARMIL3-202ENST00000559694 OSMRQ99650 979 aa11.41□□□□□ -0.58
CARMIL3-202ENST00000559694 FDXACB1Q9BRP7 624 aaPredicted RBP11.41□□□□□ -0.58
CARMIL3-202ENST00000559694 IRX2Q9BZI1 471 aaPredicted RBP11.41□□□□□ -0.58
CARMIL3-202ENST00000559694 ATRNL1Q5VV63 1379 aa11.41□□□□□ -0.58
CARMIL3-202ENST00000559694 COL1A1P02452 1464 aaPredicted RBP11.41□□□□□ -0.58
CARMIL3-202ENST00000559694 LOC102724159A0A0B4J2E5 919 aa11.41□□□□□ -0.58
CARMIL3-202ENST00000559694 KCNK3O14649 394 aa11.41□□□□□ -0.58
CARMIL3-202ENST00000559694 ELNP15502 786 aa11.41□□□□□ -0.58
CARMIL3-202ENST00000559694 CTNNA1P35221 906 aaKnown RBP11.41□□□□□ -0.58
CARMIL3-202ENST00000559694 PWP2Q15269 919 aaKnown RBP11.41□□□□□ -0.58
CARMIL3-202ENST00000559694 ALKBH5Q6P6C2 394 aaKnown RBP11.41□□□□□ -0.58
CARMIL3-202ENST00000559694 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.41□□□□□ -0.58
CARMIL3-202ENST00000559694 BPIFA3Q9BQP9 254 aa11.41□□□□□ -0.58
CARMIL3-202ENST00000559694 SNX9Q9Y5X1 595 aa11.41□□□□□ -0.58
CARMIL3-202ENST00000559694 PRKAR2AP13861 404 aaKnown RBP11.4□□□□□ -0.58
CARMIL3-202ENST00000559694 GIT2Q14161 759 aa11.4□□□□□ -0.58
CARMIL3-202ENST00000559694 GRIK4Q16099 956 aa11.4□□□□□ -0.58
CARMIL3-202ENST00000559694 NOTUMQ6P988 496 aa11.4□□□□□ -0.58
CARMIL3-202ENST00000559694 FRMD5Q7Z6J6 570 aa11.4□□□□□ -0.58
CARMIL3-202ENST00000559694 BRI3BPQ8WY22 251 aa11.4□□□□□ -0.58
CARMIL3-202ENST00000559694 KBTBD4Q9NVX7 518 aa11.4□□□□□ -0.58
CARMIL3-202ENST00000559694 TBX20Q9UMR3 447 aa11.4□□□□□ -0.58
CARMIL3-202ENST00000559694 A8MXQ7 604 aa11.4□□□□□ -0.58
CARMIL3-202ENST00000559694 KIAA0391O15091 583 aaKnown RBP11.4□□□□□ -0.58
CARMIL3-202ENST00000559694 IFNB1P01574 187 aa11.4□□□□□ -0.58
CARMIL3-202ENST00000559694 RPSAP08865 295 aaKnown RBP11.4□□□□□ -0.58
CARMIL3-202ENST00000559694 MUTP22033 750 aa11.4□□□□□ -0.58
CARMIL3-202ENST00000559694 ANXA13P27216 316 aa11.4□□□□□ -0.58
CARMIL3-202ENST00000559694 PCK1P35558 622 aa11.4□□□□□ -0.58
CARMIL3-202ENST00000559694 TSPY1Q01534 308 aa11.4□□□□□ -0.58
CARMIL3-202ENST00000559694 KYAT1Q16773 422 aa11.4□□□□□ -0.58
CARMIL3-202ENST00000559694 DNAJC24Q6P3W2 148 aa11.4□□□□□ -0.58
CARMIL3-202ENST00000559694 PASD1Q8IV76 773 aa11.4□□□□□ -0.58
CARMIL3-202ENST00000559694 SHCBP1Q8NEM2 672 aa11.4□□□□□ -0.58
CARMIL3-202ENST00000559694 DNAJB3Q8WWF6 145 aa11.4□□□□□ -0.58
CARMIL3-202ENST00000559694 DPF3Q92784 378 aa11.4□□□□□ -0.58
CARMIL3-202ENST00000559694 TACO1Q9BSH4 297 aaKnown RBP11.4□□□□□ -0.58
CARMIL3-202ENST00000559694 KLK14Q9P0G3 267 aa11.4□□□□□ -0.58
CARMIL3-202ENST00000559694 MTRF1LQ9UGC7 380 aaKnown RBP11.4□□□□□ -0.58
CARMIL3-202ENST00000559694 FHOD1Q9Y613 1164 aa11.4□□□□□ -0.58
CARMIL3-202ENST00000559694 IGKV6D-41A0A0C4DH26 115 aa11.4□□□□□ -0.58
CARMIL3-202ENST00000559694 NPTXRO95502 500 aa11.4□□□□□ -0.58
CARMIL3-202ENST00000559694 PEX19P40855 299 aa11.4□□□□□ -0.58
CARMIL3-202ENST00000559694 JAG1P78504 1218 aa11.4□□□□□ -0.58
CARMIL3-202ENST00000559694 GUCY2DQ02846 1103 aa11.4□□□□□ -0.58
CARMIL3-202ENST00000559694 EHHADHQ08426 723 aa11.4□□□□□ -0.58
CARMIL3-202ENST00000559694 DRAP1Q14919 205 aaPredicted RBP11.4□□□□□ -0.58
CARMIL3-202ENST00000559694 SNCBQ16143 134 aa11.4□□□□□ -0.58
CARMIL3-202ENST00000559694 ADAT2Q7Z6V5 191 aaKnown RBP11.4□□□□□ -0.58
CARMIL3-202ENST00000559694 ERICH1Q86X53 443 aa11.4□□□□□ -0.58
CARMIL3-202ENST00000559694 PPP1R12CQ9BZL4 782 aa11.4□□□□□ -0.58
CARMIL3-202ENST00000559694 NWD2Q9ULI1 1742 aa11.4□□□□□ -0.59
CARMIL3-202ENST00000559694 A0A0G2JLL6 359 aaPredicted RBP11.39□□□□□ -0.59
CARMIL3-202ENST00000559694 SERPING1P05155 500 aa11.39□□□□□ -0.59
CARMIL3-202ENST00000559694 ATP11AP98196 1134 aa11.39□□□□□ -0.59
CARMIL3-202ENST00000559694 TMEM132DQ14C87 1099 aa11.39□□□□□ -0.59
CARMIL3-202ENST00000559694 GKAP1Q5VSY0 366 aaPredicted RBP11.39□□□□□ -0.59
CARMIL3-202ENST00000559694 PRRT2Q7Z6L0 340 aaPredicted RBP11.39□□□□□ -0.59
CARMIL3-202ENST00000559694 APBA2Q99767 749 aa11.39□□□□□ -0.59
CARMIL3-202ENST00000559694 SENP7Q9BQF6 1050 aa11.39□□□□□ -0.59
CARMIL3-202ENST00000559694 INTS2Q9H0H0 1204 aaKnown RBP11.39□□□□□ -0.59
CARMIL3-202ENST00000559694 PDGFCQ9NRA1 345 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms