RNA–Protein interactions for RNA: ENST00000559658.5

CHRNA3-206, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 2

Gene CHRNA3, Length 1,889 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-206ENST00000559658 RNF208Q9H0X6 261 aa18.88■□□□□ 0.61
CHRNA3-206ENST00000559658 PDZD7Q9H5P4 517 aa18.88■□□□□ 0.61
CHRNA3-206ENST00000559658 PRMT7Q9NVM4 692 aaPredicted RBP18.88■□□□□ 0.61
CHRNA3-206ENST00000559658 GNAT1P11488 350 aa18.87■□□□□ 0.61
CHRNA3-206ENST00000559658 SCP2P22307 547 aa18.87■□□□□ 0.61
CHRNA3-206ENST00000559658 VAMP7P51809 220 aa18.87■□□□□ 0.61
CHRNA3-206ENST00000559658 CYP24A1Q07973 514 aa18.87■□□□□ 0.61
CHRNA3-206ENST00000559658 LMBRD2Q68DH5 695 aaPredicted RBP18.87■□□□□ 0.61
CHRNA3-206ENST00000559658 SESTD1Q86VW0 696 aa18.87■□□□□ 0.61
CHRNA3-206ENST00000559658 GPIHBP1Q8IV16 184 aa18.87■□□□□ 0.61
CHRNA3-206ENST00000559658 TC2NQ8N9U0 490 aa18.87■□□□□ 0.61
CHRNA3-206ENST00000559658 TTYH3Q9C0H2 523 aa18.87■□□□□ 0.61
CHRNA3-206ENST00000559658 CDT1Q9H211 546 aa18.87■□□□□ 0.61
CHRNA3-206ENST00000559658 FAM207AQ9NSI2 230 aaPredicted RBP18.87■□□□□ 0.61
CHRNA3-206ENST00000559658 IMPACTQ9P2X3 320 aa18.87■□□□□ 0.61
CHRNA3-206ENST00000559658 LRRIQ3A6PVS8 624 aaPredicted RBP18.86■□□□□ 0.61
CHRNA3-206ENST00000559658 CLDN3O15551 220 aa18.86■□□□□ 0.61
CHRNA3-206ENST00000559658 EXTL3O43909 919 aa18.86■□□□□ 0.61
CHRNA3-206ENST00000559658 ACTN1P12814 892 aa18.86■□□□□ 0.61
CHRNA3-206ENST00000559658 DARSP14868 501 aaKnown RBP18.86■□□□□ 0.61
CHRNA3-206ENST00000559658 OSTNP61366 133 aa18.86■□□□□ 0.61
CHRNA3-206ENST00000559658 NOLC1Q14978 699 aaKnown RBP eCLIP18.86■□□□□ 0.61
CHRNA3-206ENST00000559658 SNX17Q15036 470 aa18.86■□□□□ 0.61
CHRNA3-206ENST00000559658 PTGISQ16647 500 aa18.86■□□□□ 0.61
CHRNA3-206ENST00000559658 FAM187BQ17R55 369 aa18.86■□□□□ 0.61
CHRNA3-206ENST00000559658 TMEM132AQ24JP5 1023 aa18.86■□□□□ 0.61
CHRNA3-206ENST00000559658 ZNF568Q3ZCX4 644 aa18.86■□□□□ 0.61
CHRNA3-206ENST00000559658 DPY19L2P1Q6NXN4 242 aa18.86■□□□□ 0.61
CHRNA3-206ENST00000559658 MPZL3Q6UWV2 235 aa18.86■□□□□ 0.61
CHRNA3-206ENST00000559658 TRIM44Q96DX7 344 aaPredicted RBP18.86■□□□□ 0.61
CHRNA3-206ENST00000559658 TCHPQ9BT92 498 aa18.86■□□□□ 0.61
CHRNA3-206ENST00000559658 TTC26A0AVF1 554 aa18.86■□□□□ 0.61
CHRNA3-206ENST00000559658 MOXD2PA6NHM9 499 aa18.86■□□□□ 0.61
CHRNA3-206ENST00000559658 GOLGA6L6A8MZA4 724 aa18.86■□□□□ 0.61
CHRNA3-206ENST00000559658 MEFVO15553 781 aaPredicted RBP18.86■□□□□ 0.61
CHRNA3-206ENST00000559658 HSPA1AP0DMV8 641 aaKnown RBP18.86■□□□□ 0.61
CHRNA3-206ENST00000559658 HSPA1BP0DMV9 641 aaKnown RBP18.86■□□□□ 0.61
CHRNA3-206ENST00000559658 SLC9A1P19634 815 aa18.86■□□□□ 0.61
CHRNA3-206ENST00000559658 GCLMP48507 274 aa18.86■□□□□ 0.61
CHRNA3-206ENST00000559658 MCL1Q07820 350 aa18.86■□□□□ 0.61
CHRNA3-206ENST00000559658 INTS8Q75QN2 995 aaKnown RBP18.86■□□□□ 0.61
CHRNA3-206ENST00000559658 ELMO3Q96BJ8 720 aa18.86■□□□□ 0.61
CHRNA3-206ENST00000559658 MFSD14AQ96MC6 490 aa18.86■□□□□ 0.61
CHRNA3-206ENST00000559658 PCMTD1Q96MG8 357 aaPredicted RBP18.86■□□□□ 0.61
CHRNA3-206ENST00000559658 GLT1D1Q96MS3 346 aa18.86■□□□□ 0.61
CHRNA3-206ENST00000559658 TRPV6Q9H1D0 765 aa18.86■□□□□ 0.61
CHRNA3-206ENST00000559658 AGPAT5Q9NUQ2 364 aa18.86■□□□□ 0.61
CHRNA3-206ENST00000559658 FMO5P49326 533 aa18.85■□□□□ 0.61
CHRNA3-206ENST00000559658 SCARA3Q6AZY7 606 aa18.85■□□□□ 0.61
CHRNA3-206ENST00000559658 TAF2Q6P1X5 1199 aa18.85■□□□□ 0.61
CHRNA3-206ENST00000559658 SRGAP1Q7Z6B7 1085 aa18.85■□□□□ 0.61
CHRNA3-206ENST00000559658 CTU1Q7Z7A3 348 aaKnown RBP18.85■□□□□ 0.61
CHRNA3-206ENST00000559658 LRRC8AQ8IWT6 810 aa18.85■□□□□ 0.61
CHRNA3-206ENST00000559658 THNSL1Q8IYQ7 743 aa18.85■□□□□ 0.61
CHRNA3-206ENST00000559658 TMEM130Q8N3G9 435 aa18.85■□□□□ 0.61
CHRNA3-206ENST00000559658 PARD3BQ8TEW8 1205 aa18.85■□□□□ 0.61
CHRNA3-206ENST00000559658 LSM14BQ9BX40 385 aaKnown RBP18.85■□□□□ 0.61
CHRNA3-206ENST00000559658 GCOM2Q9BZD3 368 aaPredicted RBP18.85■□□□□ 0.61
CHRNA3-206ENST00000559658 PDE11AQ9HCR9 933 aa18.85■□□□□ 0.61
CHRNA3-206ENST00000559658 AJAP1Q9UKB5 411 aaPredicted RBP18.85■□□□□ 0.61
CHRNA3-206ENST00000559658 PHF24Q9UPV7 400 aa18.85■□□□□ 0.61
CHRNA3-206ENST00000559658 TNFSF13BQ9Y275 285 aa18.85■□□□□ 0.61
CHRNA3-206ENST00000559658 CDY2AQ9Y6F7 541 aa18.85■□□□□ 0.61
CHRNA3-206ENST00000559658 MAPK13O15264 365 aa18.84■□□□□ 0.61
CHRNA3-206ENST00000559658 MFAP3LO75121 409 aa18.84■□□□□ 0.61
CHRNA3-206ENST00000559658 NOL4O94818 638 aa18.84■□□□□ 0.61
CHRNA3-206ENST00000559658 ERLIN2O94905 339 aa18.84■□□□□ 0.61
CHRNA3-206ENST00000559658 CHRNA1P02708 482 aa18.84■□□□□ 0.61
CHRNA3-206ENST00000559658 DLATP10515 647 aaKnown RBP18.84■□□□□ 0.61
CHRNA3-206ENST00000559658 KRT13P13646 458 aa18.84■□□□□ 0.61
CHRNA3-206ENST00000559658 EIF4BP23588 611 aaKnown RBP18.84■□□□□ 0.61
CHRNA3-206ENST00000559658 HOXA11P31270 313 aaPredicted RBP18.84■□□□□ 0.61
CHRNA3-206ENST00000559658 MRPS6P82932 125 aaKnown RBP18.84■□□□□ 0.61
CHRNA3-206ENST00000559658 CCZ1BP86790 482 aa18.84■□□□□ 0.61
CHRNA3-206ENST00000559658 CCZ1P86791 482 aaPredicted RBP18.84■□□□□ 0.61
CHRNA3-206ENST00000559658 SLFN12LQ6IEE8 588 aa18.84■□□□□ 0.61
CHRNA3-206ENST00000559658 TSEN34Q9BSV6 310 aaKnown RBP18.84■□□□□ 0.61
CHRNA3-206ENST00000559658 STARD7Q9NQZ5 370 aa18.84■□□□□ 0.61
CHRNA3-206ENST00000559658 RBAKQ9NYW8 714 aaPredicted RBP18.84■□□□□ 0.61
CHRNA3-206ENST00000559658 PYCARDQ9ULZ3 195 aa18.84■□□□□ 0.61
CHRNA3-206ENST00000559658 B4GALT4O60513 344 aa18.84■□□□□ 0.61
CHRNA3-206ENST00000559658 CABYRO75952 493 aa18.84■□□□□ 0.61
CHRNA3-206ENST00000559658 PRIMPOLQ96LW4 560 aa18.84■□□□□ 0.61
CHRNA3-206ENST00000559658 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.84■□□□□ 0.61
CHRNA3-206ENST00000559658 GCNT4Q9P109 453 aa18.84■□□□□ 0.61
CHRNA3-206ENST00000559658 ZNF233A6NK53 670 aa18.83■□□□□ 0.6
CHRNA3-206ENST00000559658 TRIM21P19474 475 aaKnown RBP18.83■□□□□ 0.6
CHRNA3-206ENST00000559658 THPOP40225 353 aa18.83■□□□□ 0.6
CHRNA3-206ENST00000559658 MNX1P50219 401 aaPredicted RBP18.83■□□□□ 0.6
CHRNA3-206ENST00000559658 MYL7Q01449 175 aa18.83■□□□□ 0.6
CHRNA3-206ENST00000559658 MGAT3Q09327 533 aa18.83■□□□□ 0.6
CHRNA3-206ENST00000559658 GJB7Q6PEY0 223 aa18.83■□□□□ 0.6
CHRNA3-206ENST00000559658 CATSPER4Q7RTX7 472 aa18.83■□□□□ 0.6
CHRNA3-206ENST00000559658 TMEM139Q8IV31 216 aa18.83■□□□□ 0.6
CHRNA3-206ENST00000559658 ZNF516Q92618 1163 aa18.83■□□□□ 0.6
CHRNA3-206ENST00000559658 ZNF333Q96JL9 665 aa18.83■□□□□ 0.6
CHRNA3-206ENST00000559658 CELF4Q9BZC1 486 aaKnown RBP18.83■□□□□ 0.6
CHRNA3-206ENST00000559658 TMEM117Q9H0C3 514 aa18.83■□□□□ 0.6
CHRNA3-206ENST00000559658 SIX2Q9NPC8 291 aa18.83■□□□□ 0.6
CHRNA3-206ENST00000559658 CPSF3Q9UKF6 684 aaKnown RBP18.83■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms