RNA–Protein interactions for RNA: ENST00000559339.1

SNX1-205, Transcript of sorting nexin 1, humanhuman

TSL 1 (best)

Gene SNX1, Length 101 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-205ENST00000559339 MATR3P43243 847 aaKnown RBP eCLIP4.8□□□□□ -1.64
SNX1-205ENST00000559339 OR1G1P47890 313 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 ME1P48163 572 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 NRIP1P48552 1158 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 NASPP49321 788 aaPredicted RBP4.8□□□□□ -1.64
SNX1-205ENST00000559339 NDUFV1P49821 464 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 AMPD3Q01432 767 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 TFF2Q03403 129 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 GRIK3Q13003 919 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 PDAP1Q13442 181 aaKnown RBP4.8□□□□□ -1.64
SNX1-205ENST00000559339 MCM6Q14566 821 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 SMC1AQ14683 1233 aaKnown RBP4.8□□□□□ -1.64
SNX1-205ENST00000559339 PTPAQ15257 358 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 AMHR2Q16671 573 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 KYAT1Q16773 422 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 LEXMQ3ZCV2 418 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 ZNF568Q3ZCX4 644 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 TMEM119Q4V9L6 283 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 SPECC1Q5M775 1068 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 UBXN11Q5T124 520 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 FOXD4L5Q5VV16 416 aaPredicted RBP4.8□□□□□ -1.64
SNX1-205ENST00000559339 PLPP4Q5VZY2 271 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 KIAA1841Q6NSI8 718 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 FAM173BQ6P4H8 233 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 ELMSAN1Q6PJG2 1045 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 AGMOQ6ZNB7 445 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 SV2BQ7L1I2 683 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 KCNK18Q7Z418 384 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 DDX53Q86TM3 631 aaKnown RBP4.8□□□□□ -1.64
SNX1-205ENST00000559339 GPBP1Q86WP2 473 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 FAM178BQ8IXR5 827 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 VPS52Q8N1B4 723 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 SLC39A11Q8N1S5 342 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 MRPL43Q8N983 215 aaKnown RBP4.8□□□□□ -1.64
SNX1-205ENST00000559339 LINC00301Q8NCQ3 95 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 SMG8Q8ND04 991 aaKnown RBP4.8□□□□□ -1.64
SNX1-205ENST00000559339 FOXD4L4Q8WXT5 416 aaPredicted RBP4.8□□□□□ -1.64
SNX1-205ENST00000559339 BSNDQ8WZ55 320 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 RAD54LQ92698 747 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 KIF12Q96FN5 646 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 IGSF21Q96ID5 467 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 EPSTI1Q96J88 318 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 ZFP42Q96MM3 310 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 CLIC6Q96NY7 704 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 PNMA5Q96PV4 448 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 USP28Q96RU2 1077 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 UHRF1Q96T88 793 aaPredicted RBP4.8□□□□□ -1.64
SNX1-205ENST00000559339 REEP2Q9BRK0 252 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 TMEM175Q9BSA9 504 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 RUSC1Q9BVN2 902 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 CCDC94Q9BW85 323 aaPredicted RBP4.8□□□□□ -1.64
SNX1-205ENST00000559339 COLEC11Q9BWP8 271 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 EMILIN2Q9BXX0 1053 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 CCDC113Q9H0I3 377 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 NXF3Q9H4D5 531 aaKnown RBP4.8□□□□□ -1.64
SNX1-205ENST00000559339 PDZD7Q9H5P4 517 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 NRDE2Q9H7Z3 1164 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 POLD4Q9HCU8 107 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 PRDM6Q9NQX0 595 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 MRPL17Q9NRX2 175 aaKnown RBP4.8□□□□□ -1.64
SNX1-205ENST00000559339 RNF19AQ9NV58 838 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 SLC38A7Q9NVC3 462 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 FAM13BQ9NYF5 915 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 ARHGAP28Q9P2N2 729 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 ANKFY1Q9P2R3 1169 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 TFIP11Q9UBB9 837 aaKnown RBP4.8□□□□□ -1.64
SNX1-205ENST00000559339 DPP7Q9UHL4 492 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 FBXO2Q9UK22 296 aaPredicted RBP4.8□□□□□ -1.64
SNX1-205ENST00000559339 PCDHB8Q9UN66 801 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 TNFSF13BQ9Y275 285 aa4.8□□□□□ -1.64
SNX1-205ENST00000559339 ZMYM2Q9UBW7 1377 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 SF3B1O75533 1304 aaKnown RBP eCLIP4.79□□□□□ -1.64
SNX1-205ENST00000559339 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP4.79□□□□□ -1.64
SNX1-205ENST00000559339 MEIS3P2A8K0S8 358 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 H3BQ06 376 aaPredicted RBP4.79□□□□□ -1.64
SNX1-205ENST00000559339 K7ENM7 598 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 NRP1O14786 923 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 HNRNPDLO14979 420 aaKnown RBP4.79□□□□□ -1.64
SNX1-205ENST00000559339 PER2O15055 1255 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 INPPL1O15357 1258 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 CLDN3O15551 220 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 TRAPPC3O43617 180 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 CUTAO60888 179 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 TADA2AO75478 443 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 TOM1L1O75674 476 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 RECQL4O94761 1208 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 DDHD2O94830 711 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 CXCL14O95715 111 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 URODP06132 367 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 CTSAP10619 480 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 MAPTP10636 758 aaKnown RBP4.79□□□□□ -1.64
SNX1-205ENST00000559339 MCF2P10911 925 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 IDEP14735 1019 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 DNAJB1P25685 340 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 IRS1P35568 1242 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 SLC11A1P49279 550 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 LIG4P49917 911 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 SCNN1GP51170 649 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 ZNF131P52739 623 aa4.79□□□□□ -1.64
SNX1-205ENST00000559339 ERVFC1P60507 584 aa4.79□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms