RNA–Protein interactions for RNA: ENST00000559329.5

USP8-208, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 1 (best)

Gene USP8, Length 1,917 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-208ENST00000559329 THAP2Q9H0W7 228 aa17.21■□□□□ 0.35
USP8-208ENST00000559329 RAB20Q9NX57 234 aa17.21■□□□□ 0.35
USP8-208ENST00000559329 EXTL3O43909 919 aa17.21■□□□□ 0.35
USP8-208ENST00000559329 RFC5P40937 340 aa17.21■□□□□ 0.35
USP8-208ENST00000559329 AARSP49588 968 aaKnown RBP eCLIP17.21■□□□□ 0.35
USP8-208ENST00000559329 MFAP3P55082 362 aa17.21■□□□□ 0.35
USP8-208ENST00000559329 SLC7A5Q01650 507 aa17.21■□□□□ 0.35
USP8-208ENST00000559329 METTL7BQ6UX53 244 aa17.21■□□□□ 0.35
USP8-208ENST00000559329 MOB2Q70IA6 237 aa17.21■□□□□ 0.35
USP8-208ENST00000559329 DAAM2Q86T65 1068 aa17.21■□□□□ 0.35
USP8-208ENST00000559329 NOP9Q86U38 636 aaKnown RBP17.21■□□□□ 0.35
USP8-208ENST00000559329 RPUSD2Q8IZ73 545 aaKnown RBP17.21■□□□□ 0.35
USP8-208ENST00000559329 PPM1KQ8N3J5 372 aa17.21■□□□□ 0.35
USP8-208ENST00000559329 RASGEF1CQ8N431 466 aa17.21■□□□□ 0.35
USP8-208ENST00000559329 METTL13Q8N6R0 699 aa17.21■□□□□ 0.35
USP8-208ENST00000559329 UBE2Q2Q8WVN8 375 aa17.21■□□□□ 0.35
USP8-208ENST00000559329 L3MBTL3Q96JM7 780 aaPredicted RBP17.21■□□□□ 0.35
USP8-208ENST00000559329 FAM213AQ9BRX8 229 aa17.21■□□□□ 0.35
USP8-208ENST00000559329 PAGR1Q9BTK6 254 aa17.21■□□□□ 0.35
USP8-208ENST00000559329 SELENOOQ9BVL4 669 aa17.21■□□□□ 0.35
USP8-208ENST00000559329 KIAA1586Q9HCI6 787 aa17.21■□□□□ 0.35
USP8-208ENST00000559329 TXNRD2Q9NNW7 524 aa17.21■□□□□ 0.35
USP8-208ENST00000559329 KIAA0391O15091 583 aaKnown RBP17.2■□□□□ 0.34
USP8-208ENST00000559329 SGPL1O95470 568 aa17.2■□□□□ 0.34
USP8-208ENST00000559329 ABCB4P21439 1286 aa17.2■□□□□ 0.34
USP8-208ENST00000559329 MRPS25P82663 173 aaKnown RBP17.2■□□□□ 0.34
USP8-208ENST00000559329 SCFD2Q8WU76 684 aa17.2■□□□□ 0.34
USP8-208ENST00000559329 PSPC1Q8WXF1 523 aaKnown RBP17.2■□□□□ 0.34
USP8-208ENST00000559329 SLC7A3Q8WY07 619 aa17.2■□□□□ 0.34
USP8-208ENST00000559329 BICD1Q96G01 975 aa17.2■□□□□ 0.34
USP8-208ENST00000559329 NT5C1BQ96P26 610 aa17.2■□□□□ 0.34
USP8-208ENST00000559329 PCDHB18PQ96TA0 734 aa17.2■□□□□ 0.34
USP8-208ENST00000559329 ZCCHC17Q9NP64 241 aaKnown RBP17.2■□□□□ 0.34
USP8-208ENST00000559329 RBPJLQ9UBG7 517 aa17.2■□□□□ 0.34
USP8-208ENST00000559329 HPCAL4Q9UM19 191 aa17.2■□□□□ 0.34
USP8-208ENST00000559329 COG5Q9UP83 839 aa17.2■□□□□ 0.34
USP8-208ENST00000559329 DNAJC25-GNG10A0A024R161 153 aa17.19■□□□□ 0.34
USP8-208ENST00000559329 ZNF233A6NK53 670 aa17.19■□□□□ 0.34
USP8-208ENST00000559329 ZC3H11AO75152 810 aaKnown RBP eCLIP17.19■□□□□ 0.34
USP8-208ENST00000559329 GZMAP12544 262 aa17.19■□□□□ 0.34
USP8-208ENST00000559329 YBX3P16989 372 aaKnown RBP eCLIP17.19■□□□□ 0.34
USP8-208ENST00000559329 COPB2P35606 906 aa17.19■□□□□ 0.34
USP8-208ENST00000559329 LIG4P49917 911 aa17.19■□□□□ 0.34
USP8-208ENST00000559329 PSMD6Q15008 389 aa17.19■□□□□ 0.34
USP8-208ENST00000559329 C9orf131Q5VYM1 1079 aa17.19■□□□□ 0.34
USP8-208ENST00000559329 USP50Q70EL3 339 aaPredicted RBP17.19■□□□□ 0.34
USP8-208ENST00000559329 ZC3H15Q8WU90 426 aaKnown RBP17.19■□□□□ 0.34
USP8-208ENST00000559329 ZNF516Q92618 1163 aa17.19■□□□□ 0.34
USP8-208ENST00000559329 CALR3Q96L12 384 aaKnown RBP17.19■□□□□ 0.34
USP8-208ENST00000559329 HAPLN2Q9GZV7 340 aa17.19■□□□□ 0.34
USP8-208ENST00000559329 GDF3Q9NR23 364 aa17.19■□□□□ 0.34
USP8-208ENST00000559329 SEPT11Q9NVA2 429 aaKnown RBP17.19■□□□□ 0.34
USP8-208ENST00000559329 POLR3GO15318 223 aaPredicted RBP17.19■□□□□ 0.34
USP8-208ENST00000559329 CYP26A1O43174 497 aa17.19■□□□□ 0.34
USP8-208ENST00000559329 GGPS1O95749 300 aa17.19■□□□□ 0.34
USP8-208ENST00000559329 STAT5BP51692 787 aa17.19■□□□□ 0.34
USP8-208ENST00000559329 GCNT1Q02742 428 aa17.19■□□□□ 0.34
USP8-208ENST00000559329 STRN3Q13033 797 aa17.19■□□□□ 0.34
USP8-208ENST00000559329 GPS2Q13227 327 aa17.19■□□□□ 0.34
USP8-208ENST00000559329 SLC47A2Q86VL8 602 aa17.19■□□□□ 0.34
USP8-208ENST00000559329 RHOT2Q8IXI1 618 aa17.19■□□□□ 0.34
USP8-208ENST00000559329 SEPT1Q8WYJ6 367 aa17.19■□□□□ 0.34
USP8-208ENST00000559329 PPME1Q9Y570 386 aa17.19■□□□□ 0.34
USP8-208ENST00000559329 DDX3YO15523 660 aaKnown RBP17.18■□□□□ 0.34
USP8-208ENST00000559329 RTN2O75298 545 aa17.18■□□□□ 0.34
USP8-208ENST00000559329 ARIH2O95376 493 aa17.18■□□□□ 0.34
USP8-208ENST00000559329 FTLP02792 175 aaPredicted RBP17.18■□□□□ 0.34
USP8-208ENST00000559329 GLI1P08151 1106 aa17.18■□□□□ 0.34
USP8-208ENST00000559329 DLATP10515 647 aaKnown RBP17.18■□□□□ 0.34
USP8-208ENST00000559329 NF2P35240 595 aa17.18■□□□□ 0.34
USP8-208ENST00000559329 WNT7BP56706 349 aa17.18■□□□□ 0.34
USP8-208ENST00000559329 FMO1Q01740 532 aa17.18■□□□□ 0.34
USP8-208ENST00000559329 PTPROQ16827 1216 aa17.18■□□□□ 0.34
USP8-208ENST00000559329 FAM160B1Q5W0V3 765 aa17.18■□□□□ 0.34
USP8-208ENST00000559329 CRELD2Q6UXH1 353 aaPredicted RBP17.18■□□□□ 0.34
USP8-208ENST00000559329 DEPTORQ8TB45 409 aa17.18■□□□□ 0.34
USP8-208ENST00000559329 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.18■□□□□ 0.343e-13■■■□□ 16.5
USP8-208ENST00000559329 ACBD3Q9H3P7 528 aa17.18■□□□□ 0.34
USP8-208ENST00000559329 TMEM134Q9H6X4 195 aa17.18■□□□□ 0.34
USP8-208ENST00000559329 NRBP2Q9NSY0 501 aa17.18■□□□□ 0.34
USP8-208ENST00000559329 AMFRQ9UKV5 643 aa17.18■□□□□ 0.34
USP8-208ENST00000559329 TTC7AQ9ULT0 858 aaPredicted RBP17.18■□□□□ 0.34
USP8-208ENST00000559329 ZNFX1Q9P2E3 1918 aaKnown RBP17.17■□□□□ 0.34
USP8-208ENST00000559329 PGRMC1O00264 195 aaKnown RBP17.17■□□□□ 0.34
USP8-208ENST00000559329 CEP104O60308 925 aa17.17■□□□□ 0.34
USP8-208ENST00000559329 MAFO75444 373 aaPredicted RBP17.17■□□□□ 0.34
USP8-208ENST00000559329 MTA2O94776 668 aa17.17■□□□□ 0.34
USP8-208ENST00000559329 EDN1P05305 212 aa17.17■□□□□ 0.34
USP8-208ENST00000559329 CYP11B1P15538 503 aa17.17■□□□□ 0.34
USP8-208ENST00000559329 TCF7P36402 384 aaPredicted RBP17.17■□□□□ 0.34
USP8-208ENST00000559329 TNNT3P45378 269 aaPredicted RBP17.17■□□□□ 0.34
USP8-208ENST00000559329 NLRP11P59045 1033 aaKnown RBP17.17■□□□□ 0.34
USP8-208ENST00000559329 TNNC1P63316 161 aa17.17■□□□□ 0.34
USP8-208ENST00000559329 LY6KQ17RY6 165 aa17.17■□□□□ 0.34
USP8-208ENST00000559329 Q3C1V9 767 aa17.17■□□□□ 0.34
USP8-208ENST00000559329 GPAT2Q6NUI2 795 aa17.17■□□□□ 0.34
USP8-208ENST00000559329 ENOSF1Q7L5Y1 443 aa17.17■□□□□ 0.34
USP8-208ENST00000559329 DDX1Q92499 740 aaKnown RBP17.17■□□□□ 0.34
USP8-208ENST00000559329 KRT12Q99456 494 aa17.17■□□□□ 0.34
USP8-208ENST00000559329 HINFPQ9BQA5 517 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms