RNA–Protein interactions for RNA: ENST00000559108.1

TPM1-217, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 437 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-217ENST00000559108 ZNF507Q8TCN5 953 aa11.95□□□□□ -0.5
TPM1-217ENST00000559108 SP7Q8TDD2 431 aaPredicted RBP11.95□□□□□ -0.5
TPM1-217ENST00000559108 HELQQ8TDG4 1101 aa11.95□□□□□ -0.5
TPM1-217ENST00000559108 FAM84AQ96KN4 292 aa11.95□□□□□ -0.5
TPM1-217ENST00000559108 ZFP42Q96MM3 310 aa11.95□□□□□ -0.5
TPM1-217ENST00000559108 CASD1Q96PB1 797 aa11.95□□□□□ -0.5
TPM1-217ENST00000559108 CBWD1Q9BRT8 395 aa11.95□□□□□ -0.5
TPM1-217ENST00000559108 EXOC1Q9NV70 894 aa11.95□□□□□ -0.5
TPM1-217ENST00000559108 TMEM161AQ9NX61 479 aa11.95□□□□□ -0.5
TPM1-217ENST00000559108 MIOSQ9NXC5 875 aa11.95□□□□□ -0.5
TPM1-217ENST00000559108 SNTG2Q9NY99 539 aa11.95□□□□□ -0.5
TPM1-217ENST00000559108 KLK14Q9P0G3 267 aa11.95□□□□□ -0.5
TPM1-217ENST00000559108 CACNG4Q9UBN1 327 aa11.95□□□□□ -0.5
TPM1-217ENST00000559108 PLAGL2Q9UPG8 496 aa11.95□□□□□ -0.5
TPM1-217ENST00000559108 STYXL1Q9Y6J8 313 aa11.95□□□□□ -0.5
TPM1-217ENST00000559108 CHD7Q9P2D1 2997 aa11.94□□□□□ -0.5
TPM1-217ENST00000559108 A0A0B4J269 797 aa11.94□□□□□ -0.5
TPM1-217ENST00000559108 A0A1W2PPC1 479 aa11.94□□□□□ -0.5
TPM1-217ENST00000559108 BIN1O00499 593 aa11.94□□□□□ -0.5
TPM1-217ENST00000559108 HNRNPDLO14979 420 aaKnown RBP11.94□□□□□ -0.5
TPM1-217ENST00000559108 N4BP3O15049 544 aa11.94□□□□□ -0.5
TPM1-217ENST00000559108 EFCAB14O75071 495 aa11.94□□□□□ -0.5
TPM1-217ENST00000559108 TOM1L1O75674 476 aa11.94□□□□□ -0.5
TPM1-217ENST00000559108 CA3P07451 260 aa11.94□□□□□ -0.5
TPM1-217ENST00000559108 ZSCAN20P17040 1043 aaPredicted RBP11.94□□□□□ -0.5
TPM1-217ENST00000559108 IGFBP6P24592 240 aaPredicted RBP11.94□□□□□ -0.5
TPM1-217ENST00000559108 OSTNP61366 133 aa11.94□□□□□ -0.5
TPM1-217ENST00000559108 MCL1Q07820 350 aa11.94□□□□□ -0.5
TPM1-217ENST00000559108 PAN2Q504Q3 1202 aaKnown RBP11.94□□□□□ -0.5
TPM1-217ENST00000559108 HABP4Q5JVS0 413 aaKnown RBP11.94□□□□□ -0.5
TPM1-217ENST00000559108 MPZL3Q6UWV2 235 aa11.94□□□□□ -0.5
TPM1-217ENST00000559108 CRELD2Q6UXH1 353 aaPredicted RBP11.94□□□□□ -0.5
TPM1-217ENST00000559108 PHOSPHO2Q8TCD6 241 aa11.94□□□□□ -0.5
TPM1-217ENST00000559108 HVCN1Q96D96 273 aa11.94□□□□□ -0.5
TPM1-217ENST00000559108 CCDC51Q96ER9 411 aa11.94□□□□□ -0.5
TPM1-217ENST00000559108 MED15Q96RN5 788 aa11.94□□□□□ -0.5
TPM1-217ENST00000559108 APOL6Q9BWW8 343 aa11.94□□□□□ -0.5
TPM1-217ENST00000559108 NKX2-4Q9H2Z4 354 aa11.94□□□□□ -0.5
TPM1-217ENST00000559108 KCTD10Q9H3F6 313 aa11.94□□□□□ -0.5
TPM1-217ENST00000559108 ELAC1Q9H777 363 aaKnown RBP11.94□□□□□ -0.5
TPM1-217ENST00000559108 TMEM63CQ9P1W3 806 aa11.94□□□□□ -0.5
TPM1-217ENST00000559108 SZT2Q5T011 3432 aa11.93□□□□□ -0.5
TPM1-217ENST00000559108 CDH23Q9H251 3354 aa11.93□□□□□ -0.5
TPM1-217ENST00000559108 EPOPA6NHQ4 379 aa11.93□□□□□ -0.5
TPM1-217ENST00000559108 PTGESO14684 152 aa11.93□□□□□ -0.5
TPM1-217ENST00000559108 EIF3DO15371 548 aaKnown RBP eCLIP11.93□□□□□ -0.5
TPM1-217ENST00000559108 OFD1O75665 1012 aa11.93□□□□□ -0.5
TPM1-217ENST00000559108 RECQL4O94761 1208 aa11.93□□□□□ -0.5
TPM1-217ENST00000559108 MLH1P40692 756 aa11.93□□□□□ -0.5
TPM1-217ENST00000559108 LIG4P49917 911 aa11.93□□□□□ -0.5
TPM1-217ENST00000559108 PMS1P54277 932 aaKnown RBP11.93□□□□□ -0.5
TPM1-217ENST00000559108 STRN3Q13033 797 aa11.93□□□□□ -0.5
TPM1-217ENST00000559108 MORC3Q14149 939 aa11.93□□□□□ -0.5
TPM1-217ENST00000559108 NAB2Q15742 525 aa11.93□□□□□ -0.5
TPM1-217ENST00000559108 SCARA3Q6AZY7 606 aa11.93□□□□□ -0.5
TPM1-217ENST00000559108 KANK3Q6NY19 840 aa11.93□□□□□ -0.5
TPM1-217ENST00000559108 THNSL1Q8IYQ7 743 aa11.93□□□□□ -0.5
TPM1-217ENST00000559108 ZMAT2Q96NC0 199 aaKnown RBP11.93□□□□□ -0.5
TPM1-217ENST00000559108 ACCSQ96QU6 501 aa11.93□□□□□ -0.5
TPM1-217ENST00000559108 GAD1Q99259 594 aa11.93□□□□□ -0.5
TPM1-217ENST00000559108 GZF1Q9H116 711 aaPredicted RBP11.93□□□□□ -0.5
TPM1-217ENST00000559108 TTYH1Q9H313 450 aaPredicted RBP11.93□□□□□ -0.5
TPM1-217ENST00000559108 SEMA6BQ9H3T3 888 aa11.93□□□□□ -0.5
TPM1-217ENST00000559108 AGPAT3Q9NRZ7 376 aa11.93□□□□□ -0.5
TPM1-217ENST00000559108 MRPL42Q9Y6G3 142 aaKnown RBP11.93□□□□□ -0.5
TPM1-217ENST00000559108 HSFX4A0A1B0GTS1 333 aaPredicted RBP11.92□□□□□ -0.5
TPM1-217ENST00000559108 HSFX3A0A1B0GWH4 333 aaPredicted RBP11.92□□□□□ -0.5
TPM1-217ENST00000559108 LINC01553A4QN01 128 aa11.92□□□□□ -0.5
TPM1-217ENST00000559108 PPP1R3GB7ZBB8 358 aa11.92□□□□□ -0.5
TPM1-217ENST00000559108 F8W810 466 aa11.92□□□□□ -0.5
TPM1-217ENST00000559108 H0YCG3 227 aa11.92□□□□□ -0.5
TPM1-217ENST00000559108 INPPL1O15357 1258 aa11.92□□□□□ -0.5
TPM1-217ENST00000559108 TLL1O43897 1013 aa11.92□□□□□ -0.5
TPM1-217ENST00000559108 MCF2P10911 925 aa11.92□□□□□ -0.5
TPM1-217ENST00000559108 DNAJB2P25686 324 aa11.92□□□□□ -0.5
TPM1-217ENST00000559108 PBX3P40426 434 aa11.92□□□□□ -0.5
TPM1-217ENST00000559108 PRCPP42785 496 aa11.92□□□□□ -0.5
TPM1-217ENST00000559108 RAB27AP51159 221 aa11.92□□□□□ -0.5
TPM1-217ENST00000559108 SMAD3P84022 425 aaKnown RBP11.92□□□□□ -0.5
TPM1-217ENST00000559108 TAP1Q03518 808 aa11.92□□□□□ -0.5
TPM1-217ENST00000559108 NOLC1Q14978 699 aaKnown RBP eCLIP11.92□□□□□ -0.5
TPM1-217ENST00000559108 ENOX2Q16206 610 aaKnown RBP11.92□□□□□ -0.5
TPM1-217ENST00000559108 SLC10A6Q3KNW5 377 aa11.92□□□□□ -0.5
TPM1-217ENST00000559108 ZCWPW2Q504Y3 356 aa11.92□□□□□ -0.5
TPM1-217ENST00000559108 RBM43Q6ZSC3 357 aaKnown RBP11.92□□□□□ -0.5
TPM1-217ENST00000559108 ZNF280BQ86YH2 543 aa11.92□□□□□ -0.5
TPM1-217ENST00000559108 SMARCE1Q969G3 411 aa11.92□□□□□ -0.5
TPM1-217ENST00000559108 SAAL1Q96ER3 474 aa11.92□□□□□ -0.5
TPM1-217ENST00000559108 BICD1Q96G01 975 aa11.92□□□□□ -0.5
TPM1-217ENST00000559108 NUP62CLQ9H1M0 184 aa11.92□□□□□ -0.5
TPM1-217ENST00000559108 MTIF3Q9H2K0 278 aaKnown RBP11.92□□□□□ -0.5
TPM1-217ENST00000559108 PCIF1Q9H4Z3 704 aa11.92□□□□□ -0.5
TPM1-217ENST00000559108 CWH43Q9H720 699 aa11.92□□□□□ -0.5
TPM1-217ENST00000559108 INPP5FQ9Y2H2 1132 aa11.92□□□□□ -0.5
TPM1-217ENST00000559108 PCDHB7Q9Y5E2 793 aa11.92□□□□□ -0.5
TPM1-217ENST00000559108 PCDHA11Q9Y5I1 949 aa11.92□□□□□ -0.5
TPM1-217ENST00000559108 UBE4BO95155 1302 aa11.91□□□□□ -0.5
TPM1-217ENST00000559108 GOLGA8IPA6NC78 632 aa11.91□□□□□ -0.5
TPM1-217ENST00000559108 TRIM49BA6NDI0 452 aa11.91□□□□□ -0.5
TPM1-217ENST00000559108 ARL5CA6NH57 179 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms