RNA–Protein interactions for RNA: ENST00000559002.5

CHRNA3-204, Transcript of cholinergic receptor nicotinic alpha 3 subunit, humanhuman

TSL 1 (best)

Gene CHRNA3, Length 333 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA3-204ENST00000559002 KYAT1Q16773 422 aa7.2□□□□□ -1.26
CHRNA3-204ENST00000559002 EDRF1Q3B7T1 1238 aa7.2□□□□□ -1.26
CHRNA3-204ENST00000559002 CENPPQ6IPU0 288 aa7.2□□□□□ -1.26
CHRNA3-204ENST00000559002 SLC39A4Q6P5W5 647 aa7.2□□□□□ -1.26
CHRNA3-204ENST00000559002 LRSAM1Q6UWE0 723 aa7.2□□□□□ -1.26
CHRNA3-204ENST00000559002 C11orf57Q6ZUT1 292 aaPredicted RBP7.2□□□□□ -1.26
CHRNA3-204ENST00000559002 C12orf56Q8IXR9 622 aa7.2□□□□□ -1.26
CHRNA3-204ENST00000559002 THNSL1Q8IYQ7 743 aa7.2□□□□□ -1.26
CHRNA3-204ENST00000559002 XXYLT1Q8NBI6 393 aa7.2□□□□□ -1.26
CHRNA3-204ENST00000559002 RNF169Q8NCN4 708 aa7.2□□□□□ -1.26
CHRNA3-204ENST00000559002 PGBD4Q96DM1 585 aa7.2□□□□□ -1.26
CHRNA3-204ENST00000559002 SAAL1Q96ER3 474 aa7.2□□□□□ -1.26
CHRNA3-204ENST00000559002 ZBTB45Q96K62 511 aaPredicted RBP7.2□□□□□ -1.26
CHRNA3-204ENST00000559002 CBWD1Q9BRT8 395 aa7.2□□□□□ -1.26
CHRNA3-204ENST00000559002 CCDC94Q9BW85 323 aaPredicted RBP7.2□□□□□ -1.26
CHRNA3-204ENST00000559002 APOL6Q9BWW8 343 aa7.2□□□□□ -1.26
CHRNA3-204ENST00000559002 EIF2AQ9BY44 585 aaKnown RBP7.2□□□□□ -1.26
CHRNA3-204ENST00000559002 CDT1Q9H211 546 aa7.2□□□□□ -1.26
CHRNA3-204ENST00000559002 TSPYL2Q9H2G4 693 aaPredicted RBP7.2□□□□□ -1.26
CHRNA3-204ENST00000559002 MTIF3Q9H2K0 278 aaKnown RBP7.2□□□□□ -1.26
CHRNA3-204ENST00000559002 SEMA6BQ9H3T3 888 aa7.2□□□□□ -1.26
CHRNA3-204ENST00000559002 TSPY26PQ9H489 355 aa7.2□□□□□ -1.26
CHRNA3-204ENST00000559002 PCIF1Q9H4Z3 704 aa7.2□□□□□ -1.26
CHRNA3-204ENST00000559002 PTPRHQ9HD43 1115 aa7.2□□□□□ -1.26
CHRNA3-204ENST00000559002 RGS18Q9NS28 235 aa7.2□□□□□ -1.26
CHRNA3-204ENST00000559002 FAM105AQ9NUU6 356 aa7.2□□□□□ -1.26
CHRNA3-204ENST00000559002 RNF216Q9NWF9 866 aaPredicted RBP7.2□□□□□ -1.26
CHRNA3-204ENST00000559002 HSPBP1Q9NZL4 362 aa7.2□□□□□ -1.26
CHRNA3-204ENST00000559002 RWDD2AQ9UIY3 292 aa7.2□□□□□ -1.26
CHRNA3-204ENST00000559002 LRFN2Q9ULH4 789 aa7.2□□□□□ -1.26
CHRNA3-204ENST00000559002 TRAF3IP3Q9Y228 551 aa7.2□□□□□ -1.26
CHRNA3-204ENST00000559002 PCDHB2Q9Y5E7 798 aa7.2□□□□□ -1.26
CHRNA3-204ENST00000559002 STYXL1Q9Y6J8 313 aa7.2□□□□□ -1.26
CHRNA3-204ENST00000559002 ALPK3Q96L96 1907 aa7.2□□□□□ -1.26
CHRNA3-204ENST00000559002 A0A0B4J269 797 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 A0A0U1RQF3 1178 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 GOLGA8IPA6NC78 632 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 GOLGA8JA6NMD2 632 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 BECN2A8MW95 431 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 ENPP3O14638 875 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 ABLIM1O14639 778 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 EXTL3O43909 919 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 FGFR1OPO95684 399 aaKnown RBP7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 CAVIN2O95810 425 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 AMHP03971 560 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 CLTAP09496 248 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 STAG3L1P0CL83 205 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 EPB41P11171 864 aaKnown RBP7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 ITGA4P13612 1032 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 ADSSP30520 456 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 GRM5P41594 1212 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 MAGEA10P43363 369 aaPredicted RBP7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 ZNF165P49910 485 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 PMS1P54277 932 aaKnown RBP7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 ZNF445P59923 1031 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 OSTNP61366 133 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 TPM4P67936 248 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 FKBP3Q00688 224 aaKnown RBP7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 MYL5Q02045 173 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 MLLT1Q03111 559 aaPredicted RBP7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 MYBPC2Q14324 1141 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 NFIL3Q16649 462 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 TCTN1Q2MV58 587 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 ZCWPW2Q504Y3 356 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 UBXN11Q5T124 520 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 CEP135Q66GS9 1140 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 ANKRD40Q6AI12 368 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 FOXR2Q6PJQ5 311 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 ZNF365Q70YC5 407 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 SLC24A5Q71RS6 500 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 OTOP2Q7RTS6 562 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 ECHDC2Q86YB7 292 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 SLC9A9Q8IVB4 645 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 GPD1LQ8N335 351 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 CSGALNACT2Q8N6G5 542 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 AOPEPQ8N6M6 819 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 CEP120Q8N960 986 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 LINC01599Q8WXQ3 324 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 FAM213AQ9BRX8 229 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 FUCA2Q9BTY2 467 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 TRAIPQ9BWF2 469 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 HAPLN2Q9GZV7 340 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 NXF3Q9H4D5 531 aaKnown RBP7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 RPF1Q9H9Y2 349 aaKnown RBP7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 KIAA1586Q9HCI6 787 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 UBN1Q9NPG3 1134 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 TOPORSQ9NS56 1045 aaPredicted RBP7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 SNTG2Q9NY99 539 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 PARP2Q9UGN5 583 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 FRMD4BQ9Y2L6 1034 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 IPPQ9Y573 584 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 SIP14410 1827 aa7.19□□□□□ -1.26
CHRNA3-204ENST00000559002 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 ZNF233A6NK53 670 aa7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 SMTNL1A8MU46 457 aa7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 C9IYK1 514 aa7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 H0YGN5 161 aa7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 SLC16A3O15427 465 aaKnown RBP7.18□□□□□ -1.26
CHRNA3-204ENST00000559002 HOXA2O43364 376 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms