RNA–Protein interactions for RNA: ENST00000558954.5

RABGGTA-208, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 4

Gene RABGGTA, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-208ENST00000558954 LINC00271P0C7V0 271 aa20.7■□□□□ 0.9
RABGGTA-208ENST00000558954 LIG4P49917 911 aa20.7■□□□□ 0.9
RABGGTA-208ENST00000558954 ALCAMQ13740 583 aa20.7■□□□□ 0.9
RABGGTA-208ENST00000558954 EPC2Q52LR7 807 aa20.7■□□□□ 0.9
RABGGTA-208ENST00000558954 NOMO2Q5JPE7 1267 aa20.7■□□□□ 0.9
RABGGTA-208ENST00000558954 MPZL3Q6UWV2 235 aa20.7■□□□□ 0.9
RABGGTA-208ENST00000558954 PAGE5Q96GU1 130 aa20.7■□□□□ 0.9
RABGGTA-208ENST00000558954 GUCD1Q96NT3 240 aa20.7■□□□□ 0.9
RABGGTA-208ENST00000558954 GAS2L1Q99501 681 aaPredicted RBP20.7■□□□□ 0.9
RABGGTA-208ENST00000558954 APOL6Q9BWW8 343 aa20.7■□□□□ 0.9
RABGGTA-208ENST00000558954 TBC1D7Q9P0N9 293 aa20.7■□□□□ 0.9
RABGGTA-208ENST00000558954 ANKFY1Q9P2R3 1169 aa20.7■□□□□ 0.9
RABGGTA-208ENST00000558954 PRRC2BQ5JSZ5 2229 aaKnown RBP20.7■□□□□ 0.9
RABGGTA-208ENST00000558954 C5orf67F2Z3F1 127 aa20.69■□□□□ 0.9
RABGGTA-208ENST00000558954 OFD1O75665 1012 aa20.69■□□□□ 0.9
RABGGTA-208ENST00000558954 PPP1R37O75864 691 aa20.69■□□□□ 0.9
RABGGTA-208ENST00000558954 ZNF202O95125 648 aa20.69■□□□□ 0.9
RABGGTA-208ENST00000558954 GCNT3O95395 438 aa20.69■□□□□ 0.9
RABGGTA-208ENST00000558954 LAG3P18627 525 aa20.69■□□□□ 0.9
RABGGTA-208ENST00000558954 PROZP22891 400 aa20.69■□□□□ 0.9
RABGGTA-208ENST00000558954 NOLC1Q14978 699 aaKnown RBP eCLIP20.69■□□□□ 0.9
RABGGTA-208ENST00000558954 SPOUT1Q5T280 376 aaKnown RBP20.69■□□□□ 0.9
RABGGTA-208ENST00000558954 STXBP4Q6ZWJ1 553 aa20.69■□□□□ 0.9
RABGGTA-208ENST00000558954 UNC13DQ70J99 1090 aa20.69■□□□□ 0.9
RABGGTA-208ENST00000558954 ZNF720Q7Z2F6 126 aa20.69■□□□□ 0.9
RABGGTA-208ENST00000558954 MAP4K3Q8IVH8 894 aa20.69■□□□□ 0.9
RABGGTA-208ENST00000558954 GRAMD1CQ8IYS0 662 aa20.69■□□□□ 0.9
RABGGTA-208ENST00000558954 TMEM87AQ8NBN3 555 aa20.69■□□□□ 0.9
RABGGTA-208ENST00000558954 CDX2Q99626 313 aaPredicted RBP20.69■□□□□ 0.9
RABGGTA-208ENST00000558954 TCHPQ9BT92 498 aa20.69■□□□□ 0.9
RABGGTA-208ENST00000558954 PLVAPQ9BX97 442 aa20.69■□□□□ 0.9
RABGGTA-208ENST00000558954 CDT1Q9H211 546 aa20.69■□□□□ 0.9
RABGGTA-208ENST00000558954 BLZF1Q9H2G9 400 aa20.69■□□□□ 0.9
RABGGTA-208ENST00000558954 PTPRHQ9HD43 1115 aa20.69■□□□□ 0.9
RABGGTA-208ENST00000558954 AAASQ9NRG9 546 aa20.69■□□□□ 0.9
RABGGTA-208ENST00000558954 GIT1Q9Y2X7 761 aa20.69■□□□□ 0.9
RABGGTA-208ENST00000558954 INPPL1O15357 1258 aa20.68■□□□□ 0.9
RABGGTA-208ENST00000558954 PIGRP01833 764 aa20.68■□□□□ 0.9
RABGGTA-208ENST00000558954 RB1P06400 928 aa20.68■□□□□ 0.9
RABGGTA-208ENST00000558954 MCF2P10911 925 aa20.68■□□□□ 0.9
RABGGTA-208ENST00000558954 BMPR1AP36894 532 aa20.68■□□□□ 0.9
RABGGTA-208ENST00000558954 MLH1P40692 756 aa20.68■□□□□ 0.9
RABGGTA-208ENST00000558954 FAM160A1Q05DH4 1040 aa20.68■□□□□ 0.9
RABGGTA-208ENST00000558954 CUL4BQ13620 913 aa20.68■□□□□ 0.9
RABGGTA-208ENST00000558954 ZC2HC1CQ53FD0 456 aaPredicted RBP20.68■□□□□ 0.9
RABGGTA-208ENST00000558954 KRBA2Q6ZNG9 492 aa20.68■□□□□ 0.9
RABGGTA-208ENST00000558954 C11orf84Q9BUA3 381 aaPredicted RBP20.68■□□□□ 0.9
RABGGTA-208ENST00000558954 TYW1Q9NV66 732 aaKnown RBP20.68■□□□□ 0.9
RABGGTA-208ENST00000558954 TBC1D13Q9NVG8 400 aa20.68■□□□□ 0.9
RABGGTA-208ENST00000558954 KANSL3Q9P2N6 904 aa20.68■□□□□ 0.9
RABGGTA-208ENST00000558954 PARP2Q9UGN5 583 aa20.68■□□□□ 0.9
RABGGTA-208ENST00000558954 PCDHB13Q9Y5F0 798 aa20.68■□□□□ 0.9
RABGGTA-208ENST00000558954 PVALEFA0A1B0GWK0 134 aa20.67■□□□□ 0.9
RABGGTA-208ENST00000558954 ARL5CA6NH57 179 aa20.67■□□□□ 0.9
RABGGTA-208ENST00000558954 EPOPA6NHQ4 379 aa20.67■□□□□ 0.9
RABGGTA-208ENST00000558954 ABLIM1O14639 778 aa20.67■□□□□ 0.9
RABGGTA-208ENST00000558954 CLDN3O15551 220 aa20.67■□□□□ 0.9
RABGGTA-208ENST00000558954 GTPBP6O43824 516 aaPredicted RBP20.67■□□□□ 0.9
RABGGTA-208ENST00000558954 RECQL4O94761 1208 aa20.67■□□□□ 0.9
RABGGTA-208ENST00000558954 AKAP5P24588 427 aa20.67■□□□□ 0.9
RABGGTA-208ENST00000558954 CASP1P29466 404 aa20.67■□□□□ 0.9
RABGGTA-208ENST00000558954 MATR3P43243 847 aaKnown RBP eCLIP20.67■□□□□ 0.9
RABGGTA-208ENST00000558954 RNASELQ05823 741 aaKnown RBP20.67■□□□□ 0.9
RABGGTA-208ENST00000558954 FAM26FQ5R3K3 315 aa20.67■□□□□ 0.9
RABGGTA-208ENST00000558954 LRRC55Q6ZSA7 311 aa20.67■□□□□ 0.9
RABGGTA-208ENST00000558954 ZBTB33Q86T24 672 aa20.67■□□□□ 0.9
RABGGTA-208ENST00000558954 FMR1NBQ8N0W7 255 aaPredicted RBP20.67■□□□□ 0.9
RABGGTA-208ENST00000558954 GDPD5Q8WTR4 605 aa20.67■□□□□ 0.9
RABGGTA-208ENST00000558954 RPS6KC1Q96S38 1066 aa20.67■□□□□ 0.9
RABGGTA-208ENST00000558954 GAD1Q99259 594 aa20.67■□□□□ 0.9
RABGGTA-208ENST00000558954 RNF39Q9H2S5 420 aa20.67■□□□□ 0.9
RABGGTA-208ENST00000558954 CWH43Q9H720 699 aa20.67■□□□□ 0.9
RABGGTA-208ENST00000558954 HCSTQ9UBK5 93 aa20.67■□□□□ 0.9
RABGGTA-208ENST00000558954 EXOC7Q9UPT5 735 aa20.67■□□□□ 0.9
RABGGTA-208ENST00000558954 PCDHB12Q9Y5F1 795 aa20.67■□□□□ 0.9
RABGGTA-208ENST00000558954 MYO7AQ13402 2215 aa20.66■□□□□ 0.9
RABGGTA-208ENST00000558954 CARNS1A5YM72 827 aa20.66■□□□□ 0.9
RABGGTA-208ENST00000558954 GRM5P41594 1212 aa20.66■□□□□ 0.9
RABGGTA-208ENST00000558954 CASP5P51878 434 aa20.66■□□□□ 0.9
RABGGTA-208ENST00000558954 L1TD1Q5T7N2 865 aaKnown RBP20.66■□□□□ 0.9
RABGGTA-208ENST00000558954 KANK3Q6NY19 840 aa20.66■□□□□ 0.9
RABGGTA-208ENST00000558954 COLGALT1Q8NBJ5 622 aa20.66■□□□□ 0.9
RABGGTA-208ENST00000558954 MYLIPQ8WY64 445 aa20.66■□□□□ 0.9
RABGGTA-208ENST00000558954 P2RX5Q93086 422 aa20.66■□□□□ 0.9
RABGGTA-208ENST00000558954 ZFP42Q96MM3 310 aa20.66■□□□□ 0.9
RABGGTA-208ENST00000558954 CCDC94Q9BW85 323 aaPredicted RBP20.66■□□□□ 0.9
RABGGTA-208ENST00000558954 STRA6Q9BX79 667 aa20.66■□□□□ 0.9
RABGGTA-208ENST00000558954 GDAQ9Y2T3 454 aa20.66■□□□□ 0.9
RABGGTA-208ENST00000558954 MYBP10242 640 aa20.65■□□□□ 0.9
RABGGTA-208ENST00000558954 HARSP12081 509 aaKnown RBP20.65■□□□□ 0.9
RABGGTA-208ENST00000558954 FOSL2P15408 326 aa20.65■□□□□ 0.9
RABGGTA-208ENST00000558954 PPM1AP35813 382 aa20.65■□□□□ 0.9
RABGGTA-208ENST00000558954 MCL1Q07820 350 aa20.65■□□□□ 0.9
RABGGTA-208ENST00000558954 EHHADHQ08426 723 aa20.65■□□□□ 0.9
RABGGTA-208ENST00000558954 ZNF558Q96NG5 402 aa20.65■□□□□ 0.9
RABGGTA-208ENST00000558954 ACCSQ96QU6 501 aa20.65■□□□□ 0.9
RABGGTA-208ENST00000558954 TOPORSQ9NS56 1045 aaPredicted RBP20.65■□□□□ 0.9
RABGGTA-208ENST00000558954 EXOC1Q9NV70 894 aa20.65■□□□□ 0.9
RABGGTA-208ENST00000558954 SNTG2Q9NY99 539 aa20.65■□□□□ 0.9
RABGGTA-208ENST00000558954 UBE4BO95155 1302 aa20.64■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms