RNA–Protein interactions for RNA: ENST00000558790.5

SPG11-212, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 3

Gene SPG11, Length 858 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-212ENST00000558790 TBKBP1A7MCY6 615 aa10.98□□□□□ -0.65
SPG11-212ENST00000558790 MAFGO15525 162 aa10.98□□□□□ -0.65
SPG11-212ENST00000558790 CALM1P0DP23 149 aa10.98□□□□□ -0.65
SPG11-212ENST00000558790 CALM2P0DP24 149 aa10.98□□□□□ -0.65
SPG11-212ENST00000558790 CALM3P0DP25 149 aa10.98□□□□□ -0.65
SPG11-212ENST00000558790 ARP10275 920 aa10.98□□□□□ -0.65
SPG11-212ENST00000558790 STAT5BP51692 787 aa10.98□□□□□ -0.65
SPG11-212ENST00000558790 DNM1Q05193 864 aaKnown RBP10.98□□□□□ -0.65
SPG11-212ENST00000558790 NFX1Q12986 1120 aaKnown RBP10.98□□□□□ -0.65
SPG11-212ENST00000558790 DUSP6Q16828 381 aa10.98□□□□□ -0.65
SPG11-212ENST00000558790 SPOUT1Q5T280 376 aaKnown RBP10.98□□□□□ -0.65
SPG11-212ENST00000558790 DGLUCYQ7Z3D6 616 aa10.98□□□□□ -0.65
SPG11-212ENST00000558790 CCDC60Q8IWA6 550 aaPredicted RBP10.98□□□□□ -0.65
SPG11-212ENST00000558790 NPAS3Q8IXF0 933 aa10.98□□□□□ -0.65
SPG11-212ENST00000558790 COLGALT1Q8NBJ5 622 aa10.98□□□□□ -0.65
SPG11-212ENST00000558790 ATP8B4Q8TF62 1192 aa10.98□□□□□ -0.65
SPG11-212ENST00000558790 SUSD6Q92537 303 aa10.98□□□□□ -0.65
SPG11-212ENST00000558790 EDEM1Q92611 657 aa10.98□□□□□ -0.65
SPG11-212ENST00000558790 RPGRIP1Q96KN7 1286 aa10.98□□□□□ -0.65
SPG11-212ENST00000558790 PPP1R16BQ96T49 567 aa10.98□□□□□ -0.65
SPG11-212ENST00000558790 PHF7Q9BWX1 381 aaPredicted RBP10.98□□□□□ -0.65
SPG11-212ENST00000558790 TLE6Q9H808 572 aa10.98□□□□□ -0.65
SPG11-212ENST00000558790 AGO4Q9HCK5 861 aaKnown RBP10.98□□□□□ -0.65
SPG11-212ENST00000558790 NOC2LQ9Y3T9 749 aaKnown RBP10.98□□□□□ -0.65
SPG11-212ENST00000558790 PCDHB12Q9Y5F1 795 aa10.98□□□□□ -0.65
SPG11-212ENST00000558790 SLC12A7Q9Y666 1083 aa10.98□□□□□ -0.65
SPG11-212ENST00000558790 ZFYVE26Q68DK2 2539 aa10.98□□□□□ -0.65
SPG11-212ENST00000558790 FAM208BQ5VWN6 2430 aa10.97□□□□□ -0.65
SPG11-212ENST00000558790 IGKV6D-21A0A0A0MT36 114 aa10.97□□□□□ -0.65
SPG11-212ENST00000558790 DENND3A2RUS2 1198 aa10.97□□□□□ -0.65
SPG11-212ENST00000558790 ZBTB42B2RXF5 422 aa10.97□□□□□ -0.65
SPG11-212ENST00000558790 C9IYK1 514 aa10.97□□□□□ -0.65
SPG11-212ENST00000558790 DDX39AO00148 427 aaKnown RBP10.97□□□□□ -0.65
SPG11-212ENST00000558790 FSCN2O14926 492 aa10.97□□□□□ -0.65
SPG11-212ENST00000558790 FZD6O60353 706 aa10.97□□□□□ -0.65
SPG11-212ENST00000558790 RPS6KA5O75582 802 aa10.97□□□□□ -0.65
SPG11-212ENST00000558790 FGF18O76093 207 aa10.97□□□□□ -0.65
SPG11-212ENST00000558790 CCNE2O96020 404 aa10.97□□□□□ -0.65
SPG11-212ENST00000558790 FGFR1P11362 822 aa10.97□□□□□ -0.65
SPG11-212ENST00000558790 ATF7P17544 494 aaPredicted RBP10.97□□□□□ -0.65
SPG11-212ENST00000558790 KLRC1P26715 233 aa10.97□□□□□ -0.65
SPG11-212ENST00000558790 LIFRP42702 1097 aa10.97□□□□□ -0.65
SPG11-212ENST00000558790 NAPAP54920 295 aa10.97□□□□□ -0.65
SPG11-212ENST00000558790 ERVFC1P60507 584 aa10.97□□□□□ -0.65
SPG11-212ENST00000558790 UBE3AQ05086 875 aa10.97□□□□□ -0.65
SPG11-212ENST00000558790 SIGLEC14Q08ET2 396 aa10.97□□□□□ -0.65
SPG11-212ENST00000558790 PKN1Q16512 942 aa10.97□□□□□ -0.65
SPG11-212ENST00000558790 CEP55Q53EZ4 464 aa10.97□□□□□ -0.65
SPG11-212ENST00000558790 FAM102BQ5T8I3 360 aa10.97□□□□□ -0.65
SPG11-212ENST00000558790 PLPP4Q5VZY2 271 aa10.97□□□□□ -0.65
SPG11-212ENST00000558790 ALKBH2Q6NS38 261 aa10.97□□□□□ -0.65
SPG11-212ENST00000558790 FOXR1Q6PIV2 292 aa10.97□□□□□ -0.65
SPG11-212ENST00000558790 THNSL1Q8IYQ7 743 aa10.97□□□□□ -0.65
SPG11-212ENST00000558790 NME8Q8N427 588 aa10.97□□□□□ -0.65
SPG11-212ENST00000558790 TNPO1Q92973 898 aaKnown RBP10.97□□□□□ -0.65
SPG11-212ENST00000558790 ADAM2Q99965 735 aa10.97□□□□□ -0.65
SPG11-212ENST00000558790 ANO3Q9BYT9 981 aa10.97□□□□□ -0.65
SPG11-212ENST00000558790 LSG1Q9H089 658 aaKnown RBP10.97□□□□□ -0.65
SPG11-212ENST00000558790 RGS18Q9NS28 235 aa10.97□□□□□ -0.65
SPG11-212ENST00000558790 ATXN7L1Q9ULK2 861 aaPredicted RBP10.97□□□□□ -0.65
SPG11-212ENST00000558790 PCDHB7Q9Y5E2 793 aa10.97□□□□□ -0.65
SPG11-212ENST00000558790 COL1A2P08123 1366 aa10.97□□□□□ -0.65
SPG11-212ENST00000558790 ARID2Q68CP9 1835 aa10.96□□□□□ -0.65
SPG11-212ENST00000558790 FSD2A1L4K1 749 aa10.96□□□□□ -0.65
SPG11-212ENST00000558790 SLC27A2O14975 620 aa10.96□□□□□ -0.65
SPG11-212ENST00000558790 FGFR3P22607 806 aa10.96□□□□□ -0.65
SPG11-212ENST00000558790 SP100P23497 879 aaPredicted RBP10.96□□□□□ -0.65
SPG11-212ENST00000558790 SREBF1P36956 1147 aa10.96□□□□□ -0.65
SPG11-212ENST00000558790 SLC26A2P50443 739 aa10.96□□□□□ -0.65
SPG11-212ENST00000558790 ADCY7P51828 1080 aa10.96□□□□□ -0.65
SPG11-212ENST00000558790 APOBRQ0VD83 1088 aa10.96□□□□□ -0.65
SPG11-212ENST00000558790 GAS6Q14393 721 aa10.96□□□□□ -0.65
SPG11-212ENST00000558790 PTPN21Q16825 1174 aa10.96□□□□□ -0.65
SPG11-212ENST00000558790 KIZQ2M2Z5 673 aa10.96□□□□□ -0.65
SPG11-212ENST00000558790 SGMS1Q86VZ5 419 aa10.96□□□□□ -0.65
SPG11-212ENST00000558790 FAM228AQ86W67 206 aa10.96□□□□□ -0.65
SPG11-212ENST00000558790 KIAA0319LQ8IZA0 1049 aa10.96□□□□□ -0.65
SPG11-212ENST00000558790 TMTC2Q8N394 836 aa10.96□□□□□ -0.65
SPG11-212ENST00000558790 FANCBQ8NB91 859 aa10.96□□□□□ -0.65
SPG11-212ENST00000558790 MICAL1Q8TDZ2 1067 aa10.96□□□□□ -0.65
SPG11-212ENST00000558790 ZNF775Q96BV0 537 aaPredicted RBP10.96□□□□□ -0.65
SPG11-212ENST00000558790 YTHDC1Q96MU7 727 aaKnown RBP10.96□□□□□ -0.65
SPG11-212ENST00000558790 NEK1Q96PY6 1258 aa10.96□□□□□ -0.65
SPG11-212ENST00000558790 CDCA3Q99618 268 aaPredicted RBP10.96□□□□□ -0.65
SPG11-212ENST00000558790 OSMRQ99650 979 aa10.96□□□□□ -0.65
SPG11-212ENST00000558790 CWH43Q9H720 699 aa10.96□□□□□ -0.65
SPG11-212ENST00000558790 RIC8AQ9NPQ8 531 aa10.96□□□□□ -0.65
SPG11-212ENST00000558790 C1orf112Q9NSG2 853 aa10.96□□□□□ -0.65
SPG11-212ENST00000558790 TYW1Q9NV66 732 aaKnown RBP10.96□□□□□ -0.65
SPG11-212ENST00000558790 TMEM260Q9NX78 707 aa10.96□□□□□ -0.65
SPG11-212ENST00000558790 POLIQ9UNA4 740 aa10.96□□□□□ -0.65
SPG11-212ENST00000558790 ST3GAL5Q9UNP4 418 aa10.96□□□□□ -0.65
SPG11-212ENST00000558790 NBEAQ8NFP9 2946 aa10.96□□□□□ -0.66
SPG11-212ENST00000558790 OTOGLQ3ZCN5 2332 aa10.96□□□□□ -0.66
SPG11-212ENST00000558790 GCN1Q92616 2671 aaKnown RBP10.95□□□□□ -0.66
SPG11-212ENST00000558790 MEIS1O00470 390 aa10.95□□□□□ -0.66
SPG11-212ENST00000558790 HBP1O60381 514 aa10.95□□□□□ -0.66
SPG11-212ENST00000558790 C22orf31O95567 290 aa10.95□□□□□ -0.66
SPG11-212ENST00000558790 VTNP04004 478 aa10.95□□□□□ -0.66
SPG11-212ENST00000558790 LAG3P18627 525 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms