RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 TRIM42Q8IWZ5 723 aa17.3■□□□□ 0.36
HMBOX1-212ENST00000558662 SYCP3Q8IZU3 236 aa17.3■□□□□ 0.36
HMBOX1-212ENST00000558662 LARGE2Q8N3Y3 721 aa17.3■□□□□ 0.36
HMBOX1-212ENST00000558662 RASGRP4Q8TDF6 673 aa17.3■□□□□ 0.36
HMBOX1-212ENST00000558662 CATSPER2Q96P56 530 aa17.3■□□□□ 0.36
HMBOX1-212ENST00000558662 LRRC19Q9H756 370 aa17.3■□□□□ 0.36
HMBOX1-212ENST00000558662 TRAF3IP3Q9Y228 551 aa17.3■□□□□ 0.36
HMBOX1-212ENST00000558662 COL18A1P39060 1754 aa17.3■□□□□ 0.36
HMBOX1-212ENST00000558662 TOGARAM1Q9Y4F4 1720 aa17.3■□□□□ 0.36
HMBOX1-212ENST00000558662 ADAMTS3O15072 1205 aa17.3■□□□□ 0.36
HMBOX1-212ENST00000558662 ASLP04424 464 aa17.3■□□□□ 0.36
HMBOX1-212ENST00000558662 RGS2P41220 211 aa17.3■□□□□ 0.36
HMBOX1-212ENST00000558662 KRT72Q14CN4 511 aa17.3■□□□□ 0.36
HMBOX1-212ENST00000558662 RASA2Q15283 850 aa17.3■□□□□ 0.36
HMBOX1-212ENST00000558662 HLFQ16534 295 aa17.3■□□□□ 0.36
HMBOX1-212ENST00000558662 ARMC3Q5W041 872 aa17.3■□□□□ 0.36
HMBOX1-212ENST00000558662 MIGA2Q7L4E1 593 aa17.3■□□□□ 0.36
HMBOX1-212ENST00000558662 DYMQ7RTS9 669 aa17.3■□□□□ 0.36
HMBOX1-212ENST00000558662 PROSER2Q86WR7 435 aaPredicted RBP17.3■□□□□ 0.36
HMBOX1-212ENST00000558662 MIGA1Q8NAN2 632 aa17.3■□□□□ 0.36
HMBOX1-212ENST00000558662 LENG1Q96BZ8 264 aaPredicted RBP17.3■□□□□ 0.36
HMBOX1-212ENST00000558662 C18orf8Q96DM3 657 aa17.3■□□□□ 0.36
HMBOX1-212ENST00000558662 TTC25Q96NG3 672 aa17.3■□□□□ 0.36
HMBOX1-212ENST00000558662 PREBQ9HCU5 417 aa17.3■□□□□ 0.36
HMBOX1-212ENST00000558662 SSU72Q9NP77 194 aaKnown RBP17.3■□□□□ 0.36
HMBOX1-212ENST00000558662 PTTG2Q9NZH5 202 aa17.3■□□□□ 0.36
HMBOX1-212ENST00000558662 ARPP21Q9UBL0 812 aaPredicted RBP17.3■□□□□ 0.36
HMBOX1-212ENST00000558662 CACNA1SQ13698 1873 aa17.29■□□□□ 0.36
HMBOX1-212ENST00000558662 SMAPO00193 183 aa17.29■□□□□ 0.36
HMBOX1-212ENST00000558662 DNAJC6O75061 913 aa17.29■□□□□ 0.36
HMBOX1-212ENST00000558662 TROVE2P10155 538 aaKnown RBP eCLIP17.29■□□□□ 0.36
HMBOX1-212ENST00000558662 IDO1P14902 403 aa17.29■□□□□ 0.36
HMBOX1-212ENST00000558662 RFX1P22670 979 aa17.29■□□□□ 0.36
HMBOX1-212ENST00000558662 FOXN2P32314 431 aa17.29■□□□□ 0.36
HMBOX1-212ENST00000558662 DSG1Q02413 1049 aa17.29■□□□□ 0.36
HMBOX1-212ENST00000558662 USP4Q13107 963 aa17.29■□□□□ 0.36
HMBOX1-212ENST00000558662 EPHA7Q15375 998 aa17.29■□□□□ 0.36
HMBOX1-212ENST00000558662 CALCRLQ16602 461 aa17.29■□□□□ 0.36
HMBOX1-212ENST00000558662 LETM2Q2VYF4 491 aa17.29■□□□□ 0.36
HMBOX1-212ENST00000558662 ADGRG6Q86SQ4 1221 aa17.29■□□□□ 0.36
HMBOX1-212ENST00000558662 CCDC125Q86Z20 511 aa17.29■□□□□ 0.36
HMBOX1-212ENST00000558662 GPIHBP1Q8IV16 184 aa17.29■□□□□ 0.36
HMBOX1-212ENST00000558662 GRK7Q8WTQ7 553 aa17.29■□□□□ 0.36
HMBOX1-212ENST00000558662 SDR42E1Q8WUS8 393 aa17.29■□□□□ 0.36
HMBOX1-212ENST00000558662 GPKOWQ92917 476 aaPredicted RBP eCLIP17.29■□□□□ 0.36
HMBOX1-212ENST00000558662 ZNF653Q96CK0 615 aa17.29■□□□□ 0.36
HMBOX1-212ENST00000558662 ZSWIM1Q9BR11 485 aa17.29■□□□□ 0.36
HMBOX1-212ENST00000558662 CYLDQ9NQC7 956 aa17.29■□□□□ 0.36
HMBOX1-212ENST00000558662 BAZ2BQ9UIF8 2168 aaKnown RBP17.29■□□□□ 0.36
HMBOX1-212ENST00000558662 XRCC5P13010 732 aaKnown RBP17.28■□□□□ 0.36
HMBOX1-212ENST00000558662 CRABP2P29373 138 aa17.28■□□□□ 0.36
HMBOX1-212ENST00000558662 RAP1GDS1P52306 607 aa17.28■□□□□ 0.36
HMBOX1-212ENST00000558662 HNRNPDQ14103 355 aaKnown RBP17.28■□□□□ 0.36
HMBOX1-212ENST00000558662 MPP2Q14168 576 aa17.28■□□□□ 0.36
HMBOX1-212ENST00000558662 NLRP10Q86W26 655 aa17.28■□□□□ 0.36
HMBOX1-212ENST00000558662 MYLK4Q86YV6 388 aaPredicted RBP17.28■□□□□ 0.36
HMBOX1-212ENST00000558662 CCNJLQ8IV13 435 aa17.28■□□□□ 0.36
HMBOX1-212ENST00000558662 CCDC105Q8IYK2 499 aa17.28■□□□□ 0.36
HMBOX1-212ENST00000558662 RBM46Q8TBY0 533 aaKnown RBP17.28■□□□□ 0.36
HMBOX1-212ENST00000558662 DENND1AQ8TEH3 1009 aa17.28■□□□□ 0.36
HMBOX1-212ENST00000558662 ZDHHC7Q9NXF8 308 aa17.28■□□□□ 0.36
HMBOX1-212ENST00000558662 PCDHA2Q9Y5H9 948 aa17.28■□□□□ 0.36
HMBOX1-212ENST00000558662 IRS4O14654 1257 aaPredicted RBP17.28■□□□□ 0.36
HMBOX1-212ENST00000558662 MAGEC1O60732 1142 aa17.28■□□□□ 0.36
HMBOX1-212ENST00000558662 PFDN1O60925 122 aa17.28■□□□□ 0.36
HMBOX1-212ENST00000558662 MTA2O94776 668 aa17.28■□□□□ 0.36
HMBOX1-212ENST00000558662 RPL13P26373 211 aaKnown RBP17.28■□□□□ 0.36
HMBOX1-212ENST00000558662 SOX5P35711 763 aa17.28■□□□□ 0.36
HMBOX1-212ENST00000558662 USH1GQ495M9 461 aa17.28■□□□□ 0.36
HMBOX1-212ENST00000558662 ESCO1Q5FWF5 840 aa17.28■□□□□ 0.36
HMBOX1-212ENST00000558662 C6orf163Q5TEZ5 329 aa17.28■□□□□ 0.36
HMBOX1-212ENST00000558662 ACAD11Q709F0 780 aa17.28■□□□□ 0.36
HMBOX1-212ENST00000558662 OTUD6AQ7L8S5 288 aa17.28■□□□□ 0.36
HMBOX1-212ENST00000558662 CLNKQ7Z7G1 428 aa17.28■□□□□ 0.36
HMBOX1-212ENST00000558662 NAT14Q8WUY8 206 aa17.28■□□□□ 0.36
HMBOX1-212ENST00000558662 NRG4Q8WWG1 115 aa17.28■□□□□ 0.36
HMBOX1-212ENST00000558662 MCUR1Q96AQ8 359 aa17.28■□□□□ 0.36
HMBOX1-212ENST00000558662 SNF8Q96H20 258 aa17.28■□□□□ 0.36
HMBOX1-212ENST00000558662 CADM1Q9BY67 442 aaKnown RBP17.28■□□□□ 0.36
HMBOX1-212ENST00000558662 GPAMQ9HCL2 828 aa17.28■□□□□ 0.36
HMBOX1-212ENST00000558662 TIMMDC1Q9NPL8 285 aa17.28■□□□□ 0.36
HMBOX1-212ENST00000558662 EURLQ9NYK6 297 aa17.28■□□□□ 0.36
HMBOX1-212ENST00000558662 GSC2O15499 205 aa17.27■□□□□ 0.35
HMBOX1-212ENST00000558662 CALUO43852 315 aaPredicted RBP17.27■□□□□ 0.35
HMBOX1-212ENST00000558662 SORBS3O60504 671 aa17.27■□□□□ 0.35
HMBOX1-212ENST00000558662 VEGFAP15692 232 aaPredicted RBP17.27■□□□□ 0.35
HMBOX1-212ENST00000558662 PLCG2P16885 1265 aa17.27■□□□□ 0.35
HMBOX1-212ENST00000558662 ARHGAP4P98171 946 aa17.27■□□□□ 0.35
HMBOX1-212ENST00000558662 WDR72Q3MJ13 1102 aa17.27■□□□□ 0.35
HMBOX1-212ENST00000558662 Q4G0T1 1027 aa17.27■□□□□ 0.35
HMBOX1-212ENST00000558662 HEATR3Q7Z4Q2 680 aa17.27■□□□□ 0.35
HMBOX1-212ENST00000558662 NSL1Q96IY1 281 aa17.27■□□□□ 0.35
HMBOX1-212ENST00000558662 CCDC85AQ96PX6 553 aaPredicted RBP17.27■□□□□ 0.35
HMBOX1-212ENST00000558662 SYT11Q9BT88 431 aa17.27■□□□□ 0.35
HMBOX1-212ENST00000558662 STK33Q9BYT3 514 aa17.27■□□□□ 0.35
HMBOX1-212ENST00000558662 STK32BQ9NY57 414 aa17.27■□□□□ 0.35
HMBOX1-212ENST00000558662 KAT6BQ8WYB5 2073 aa17.26■□□□□ 0.35
HMBOX1-212ENST00000558662 A0A1W2PRG0 241 aa17.26■□□□□ 0.35
HMBOX1-212ENST00000558662 BIRC5O15392 142 aa17.26■□□□□ 0.35
HMBOX1-212ENST00000558662 THAP12O43422 761 aa17.26■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms