RNA–Protein interactions for RNA: ENST00000558474.1

VPS18-202, Transcript of VPS18, CORVET/HOPS core subunit, humanhuman

TSL 3 BASIC

Gene VPS18, Length 873 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS18-202ENST00000558474 SNRNP35Q16560 246 aaKnown RBP16.22■□□□□ 0.19
VPS18-202ENST00000558474 TMEM132AQ24JP5 1023 aa16.22■□□□□ 0.19
VPS18-202ENST00000558474 FBXO47Q5MNV8 452 aa16.22■□□□□ 0.19
VPS18-202ENST00000558474 SLC27A1Q6PCB7 646 aa16.22■□□□□ 0.19
VPS18-202ENST00000558474 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.22■□□□□ 0.19
VPS18-202ENST00000558474 TMEM40Q8WWA1 233 aa16.22■□□□□ 0.19
VPS18-202ENST00000558474 MFSD14AQ96MC6 490 aa16.22■□□□□ 0.19
VPS18-202ENST00000558474 TCHPQ9BT92 498 aa16.22■□□□□ 0.19
VPS18-202ENST00000558474 PCIF1Q9H4Z3 704 aa16.22■□□□□ 0.19
VPS18-202ENST00000558474 PDZD7Q9H5P4 517 aa16.22■□□□□ 0.19
VPS18-202ENST00000558474 TISP43B9A030 160 aa16.21■□□□□ 0.19
VPS18-202ENST00000558474 B4GALT5O43286 388 aa16.21■□□□□ 0.19
VPS18-202ENST00000558474 STX10O60499 249 aa16.21■□□□□ 0.19
VPS18-202ENST00000558474 SELPP16109 830 aa16.21■□□□□ 0.19
VPS18-202ENST00000558474 CDC25BP30305 580 aa16.21■□□□□ 0.19
VPS18-202ENST00000558474 HOXA11P31270 313 aaPredicted RBP16.21■□□□□ 0.19
VPS18-202ENST00000558474 CASP4P49662 377 aa16.21■□□□□ 0.19
VPS18-202ENST00000558474 PLCB2Q00722 1185 aa16.21■□□□□ 0.19
VPS18-202ENST00000558474 NR1I3Q14994 352 aa16.21■□□□□ 0.19
VPS18-202ENST00000558474 SURF1Q15526 300 aa16.21■□□□□ 0.19
VPS18-202ENST00000558474 ZNF568Q3ZCX4 644 aa16.21■□□□□ 0.19
VPS18-202ENST00000558474 VWA3BQ502W6 1294 aa16.21■□□□□ 0.19
VPS18-202ENST00000558474 HSP90AA4PQ58FG1 418 aa16.21■□□□□ 0.19
VPS18-202ENST00000558474 ZNF618Q5T7W0 954 aa16.21■□□□□ 0.19
VPS18-202ENST00000558474 FAM228AQ86W67 206 aa16.21■□□□□ 0.19
VPS18-202ENST00000558474 TMC2Q8TDI7 906 aa16.21■□□□□ 0.19
VPS18-202ENST00000558474 ZBTB45Q96K62 511 aaPredicted RBP16.21■□□□□ 0.19
VPS18-202ENST00000558474 NOC4LQ9BVI4 516 aaKnown RBP16.21■□□□□ 0.19
VPS18-202ENST00000558474 RTN4Q9NQC3 1192 aaKnown RBP16.21■□□□□ 0.19
VPS18-202ENST00000558474 IFNKQ9P0W0 207 aa16.21■□□□□ 0.19
VPS18-202ENST00000558474 ANKFY1Q9P2R3 1169 aa16.21■□□□□ 0.19
VPS18-202ENST00000558474 NOC2LQ9Y3T9 749 aaKnown RBP16.21■□□□□ 0.19
VPS18-202ENST00000558474 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.21■□□□□ 0.19
VPS18-202ENST00000558474 TTLL13PA6NNM8 815 aa16.2■□□□□ 0.18
VPS18-202ENST00000558474 LGALS16A8MUM7 142 aa16.2■□□□□ 0.18
VPS18-202ENST00000558474 FAM189A1O60320 539 aa16.2■□□□□ 0.18
VPS18-202ENST00000558474 CSDE1O75534 798 aaKnown RBP16.2■□□□□ 0.18
VPS18-202ENST00000558474 CTSHP09668 335 aa16.2■□□□□ 0.18
VPS18-202ENST00000558474 ZNF75DP51815 510 aa16.2■□□□□ 0.18
VPS18-202ENST00000558474 BFSP1Q12934 665 aa16.2■□□□□ 0.18
VPS18-202ENST00000558474 TRAF7Q6Q0C0 670 aa16.2■□□□□ 0.18
VPS18-202ENST00000558474 CREBRFQ8IUR6 639 aa16.2■□□□□ 0.18
VPS18-202ENST00000558474 EEF2KMTQ96G04 330 aa16.2■□□□□ 0.18
VPS18-202ENST00000558474 PAWRQ96IZ0 340 aaKnown RBP16.2■□□□□ 0.18
VPS18-202ENST00000558474 TRAIPQ9BWF2 469 aa16.2■□□□□ 0.18
VPS18-202ENST00000558474 XPO4Q9C0E2 1151 aaKnown RBP16.2■□□□□ 0.18
VPS18-202ENST00000558474 HAPLN2Q9GZV7 340 aa16.2■□□□□ 0.18
VPS18-202ENST00000558474 CDT1Q9H211 546 aa16.2■□□□□ 0.18
VPS18-202ENST00000558474 NDST4Q9H3R1 872 aa16.2■□□□□ 0.18
VPS18-202ENST00000558474 ERVK-5Q9HDB9 667 aa16.2■□□□□ 0.18
VPS18-202ENST00000558474 TANC1Q9C0D5 1861 aa16.2■□□□□ 0.18
VPS18-202ENST00000558474 PMM2O15305 246 aa16.19■□□□□ 0.18
VPS18-202ENST00000558474 AP5Z1O43299 807 aa16.19■□□□□ 0.18
VPS18-202ENST00000558474 PQBP1O60828 265 aaKnown RBP16.19■□□□□ 0.18
VPS18-202ENST00000558474 ADCY5O95622 1261 aa16.19■□□□□ 0.18
VPS18-202ENST00000558474 GTF2H1P32780 548 aa16.19■□□□□ 0.18
VPS18-202ENST00000558474 VAMP7P51809 220 aa16.19■□□□□ 0.18
VPS18-202ENST00000558474 CYP24A1Q07973 514 aa16.19■□□□□ 0.18
VPS18-202ENST00000558474 PAK2Q13177 524 aa16.19■□□□□ 0.18
VPS18-202ENST00000558474 PSMD6Q15008 389 aa16.19■□□□□ 0.18
VPS18-202ENST00000558474 MIIPQ5JXC2 388 aa16.19■□□□□ 0.18
VPS18-202ENST00000558474 FKBP15Q5T1M5 1219 aa16.19■□□□□ 0.18
VPS18-202ENST00000558474 CRELD2Q6UXH1 353 aaPredicted RBP16.19■□□□□ 0.18
VPS18-202ENST00000558474 LRRC8DQ7L1W4 858 aa16.19■□□□□ 0.18
VPS18-202ENST00000558474 UBE2Q1Q7Z7E8 422 aa16.19■□□□□ 0.18
VPS18-202ENST00000558474 DIS3LQ8TF46 1054 aaKnown RBP16.19■□□□□ 0.18
VPS18-202ENST00000558474 SLC35C1Q96A29 364 aa16.19■□□□□ 0.18
VPS18-202ENST00000558474 SAAL1Q96ER3 474 aa16.19■□□□□ 0.18
VPS18-202ENST00000558474 FAM213AQ9BRX8 229 aa16.19■□□□□ 0.18
VPS18-202ENST00000558474 TAB2Q9NYJ8 693 aa16.19■□□□□ 0.18
VPS18-202ENST00000558474 CPSF3Q9UKF6 684 aaKnown RBP16.19■□□□□ 0.18
VPS18-202ENST00000558474 ST3GAL5Q9UNP4 418 aa16.19■□□□□ 0.18
VPS18-202ENST00000558474 PIN4Q9Y237 131 aaKnown RBP16.19■□□□□ 0.18
VPS18-202ENST00000558474 A0A1W2PQC6 194 aa16.18■□□□□ 0.18
VPS18-202ENST00000558474 GTPBP10A4D1E9 387 aaKnown RBP16.18■□□□□ 0.18
VPS18-202ENST00000558474 P4HA2O15460 535 aa16.18■□□□□ 0.18
VPS18-202ENST00000558474 N4BP1O75113 896 aaKnown RBP16.18■□□□□ 0.18
VPS18-202ENST00000558474 IL18RAPO95256 599 aa16.18■□□□□ 0.18
VPS18-202ENST00000558474 AFPP02771 609 aaKnown RBP16.18■□□□□ 0.18
VPS18-202ENST00000558474 CLTAP09496 248 aa16.18■□□□□ 0.18
VPS18-202ENST00000558474 GRM5P41594 1212 aa16.18■□□□□ 0.18
VPS18-202ENST00000558474 AP3M2P53677 418 aa16.18■□□□□ 0.18
VPS18-202ENST00000558474 ATN1P54259 1190 aaPredicted RBP16.18■□□□□ 0.18
VPS18-202ENST00000558474 CLDN10P78369 228 aa16.18■□□□□ 0.18
VPS18-202ENST00000558474 TLE2Q04725 743 aa16.18■□□□□ 0.18
VPS18-202ENST00000558474 FAAP100Q0VG06 881 aa16.18■□□□□ 0.18
VPS18-202ENST00000558474 LPIN1Q14693 890 aa16.18■□□□□ 0.18
VPS18-202ENST00000558474 TRIM60Q495X7 471 aa16.18■□□□□ 0.18
VPS18-202ENST00000558474 EEF1DP3Q658K8 133 aa16.18■□□□□ 0.18
VPS18-202ENST00000558474 CBWD2Q8IUF1 395 aa16.18■□□□□ 0.18
VPS18-202ENST00000558474 BRSK2Q8IWQ3 736 aa16.18■□□□□ 0.18
VPS18-202ENST00000558474 CD302Q8IX05 232 aa16.18■□□□□ 0.18
VPS18-202ENST00000558474 PARD3BQ8TEW8 1205 aa16.18■□□□□ 0.18
VPS18-202ENST00000558474 CPB2Q96IY4 423 aa16.18■□□□□ 0.18
VPS18-202ENST00000558474 NAP1L5Q96NT1 182 aaPredicted RBP16.18■□□□□ 0.18
VPS18-202ENST00000558474 TSPAN18Q96SJ8 248 aa16.18■□□□□ 0.18
VPS18-202ENST00000558474 VPS16Q9H269 839 aa16.18■□□□□ 0.18
VPS18-202ENST00000558474 RBAKQ9NYW8 714 aaPredicted RBP16.18■□□□□ 0.18
VPS18-202ENST00000558474 PADI3Q9ULW8 664 aa16.18■□□□□ 0.18
VPS18-202ENST00000558474 RALGAPA2Q2PPJ7 1873 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms