RNA–Protein interactions for RNA: ENST00000557916.5

SMAD6-202, Transcript of SMAD family member 6, humanhuman

TSL 1 (best)

Gene SMAD6, Length 1,401 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-202ENST00000557916 ABLIM1O14639 778 aa27.99■■■□□ 2.07
SMAD6-202ENST00000557916 ARHGEF15O94989 841 aa27.99■■■□□ 2.07
SMAD6-202ENST00000557916 KCNA1Q09470 495 aa27.99■■■□□ 2.07
SMAD6-202ENST00000557916 PNOCQ13519 176 aa27.99■■■□□ 2.07
SMAD6-202ENST00000557916 ZBTB33Q86T24 672 aa27.99■■■□□ 2.07
SMAD6-202ENST00000557916 GLIS3Q8NEA6 775 aa27.99■■■□□ 2.07
SMAD6-202ENST00000557916 CASD1Q96PB1 797 aa27.99■■■□□ 2.07
SMAD6-202ENST00000557916 CDT1Q9H211 546 aa27.99■■■□□ 2.07
SMAD6-202ENST00000557916 UBN1Q9NPG3 1134 aa27.99■■■□□ 2.07
SMAD6-202ENST00000557916 LMBRD1Q9NUN5 540 aa27.99■■■□□ 2.07
SMAD6-202ENST00000557916 ANKFY1Q9P2R3 1169 aa27.99■■■□□ 2.07
SMAD6-202ENST00000557916 EXOC7Q9UPT5 735 aa27.99■■■□□ 2.07
SMAD6-202ENST00000557916 LINC01553A4QN01 128 aa27.98■■■□□ 2.07
SMAD6-202ENST00000557916 GOLGA6L22H0YM25 854 aa27.98■■■□□ 2.07
SMAD6-202ENST00000557916 PRPF6O94906 941 aaKnown RBP27.98■■■□□ 2.07
SMAD6-202ENST00000557916 MATR3P43243 847 aaKnown RBP eCLIP27.98■■■□□ 2.07
SMAD6-202ENST00000557916 TAP1Q03518 808 aa27.98■■■□□ 2.07
SMAD6-202ENST00000557916 GLB1LQ6UWU2 654 aa27.98■■■□□ 2.07
SMAD6-202ENST00000557916 CCDC47Q96A33 483 aaKnown RBP27.98■■■□□ 2.07
SMAD6-202ENST00000557916 RSAD1Q9HA92 442 aa27.98■■■□□ 2.07
SMAD6-202ENST00000557916 SLC39A2Q9NP94 309 aa27.98■■■□□ 2.07
SMAD6-202ENST00000557916 COL4A6Q14031 1691 aa27.97■■■□□ 2.07
SMAD6-202ENST00000557916 TMEM265A0A087WTH1 108 aa27.97■■■□□ 2.07
SMAD6-202ENST00000557916 CLDN3O15551 220 aa27.97■■■□□ 2.07
SMAD6-202ENST00000557916 MCF2P10911 925 aa27.97■■■□□ 2.07
SMAD6-202ENST00000557916 AKAP5P24588 427 aa27.97■■■□□ 2.07
SMAD6-202ENST00000557916 PSMD2Q13200 908 aa27.97■■■□□ 2.07
SMAD6-202ENST00000557916 GPR153Q6NV75 609 aa27.97■■■□□ 2.07
SMAD6-202ENST00000557916 ELOA2Q8IYF1 753 aaPredicted RBP27.97■■■□□ 2.07
SMAD6-202ENST00000557916 SNTG2Q9NY99 539 aa27.97■■■□□ 2.07
SMAD6-202ENST00000557916 PARP2Q9UGN5 583 aa27.97■■■□□ 2.07
SMAD6-202ENST00000557916 OFD1O75665 1012 aa27.96■■■□□ 2.07
SMAD6-202ENST00000557916 HARSP12081 509 aaKnown RBP27.96■■■□□ 2.07
SMAD6-202ENST00000557916 MCL1Q07820 350 aa27.96■■■□□ 2.07
SMAD6-202ENST00000557916 NOLC1Q14978 699 aaKnown RBP eCLIP27.96■■■□□ 2.07
SMAD6-202ENST00000557916 EPM2AIP1Q7L775 607 aaPredicted RBP27.96■■■□□ 2.07
SMAD6-202ENST00000557916 SYCP3Q8IZU3 236 aa27.96■■■□□ 2.07
SMAD6-202ENST00000557916 ZNF576Q9H609 170 aa27.96■■■□□ 2.07
SMAD6-202ENST00000557916 INPP5FQ9Y2H2 1132 aa27.96■■■□□ 2.07
SMAD6-202ENST00000557916 GIT1Q9Y2X7 761 aa27.96■■■□□ 2.07
SMAD6-202ENST00000557916 ANKRD63C9JTQ0 380 aa27.95■■■□□ 2.07
SMAD6-202ENST00000557916 EIF3DO15371 548 aaKnown RBP eCLIP27.95■■■□□ 2.07
SMAD6-202ENST00000557916 STK4Q13043 487 aa27.95■■■□□ 2.07
SMAD6-202ENST00000557916 ZNF697Q5TEC3 545 aa27.95■■■□□ 2.07
SMAD6-202ENST00000557916 SLC39A4Q6P5W5 647 aa27.95■■■□□ 2.07
SMAD6-202ENST00000557916 RSPH1Q8WYR4 309 aa27.95■■■□□ 2.07
SMAD6-202ENST00000557916 IKZF4Q9H2S9 585 aa27.95■■■□□ 2.07
SMAD6-202ENST00000557916 TMEM206Q9H813 350 aa27.95■■■□□ 2.07
SMAD6-202ENST00000557916 GDAQ9Y2T3 454 aa27.95■■■□□ 2.07
SMAD6-202ENST00000557916 MRPL42Q9Y6G3 142 aaKnown RBP27.95■■■□□ 2.07
SMAD6-202ENST00000557916 CHD9Q3L8U1 2897 aa27.95■■■□□ 2.06
SMAD6-202ENST00000557916 KCNB1Q14721 858 aa27.94■■■□□ 2.06
SMAD6-202ENST00000557916 NOMO2Q5JPE7 1267 aa27.94■■■□□ 2.06
SMAD6-202ENST00000557916 THNSL1Q8IYQ7 743 aa27.94■■■□□ 2.06
SMAD6-202ENST00000557916 CEP120Q8N960 986 aa27.94■■■□□ 2.06
SMAD6-202ENST00000557916 ZNF507Q8TCN5 953 aa27.94■■■□□ 2.06
SMAD6-202ENST00000557916 TGS1Q96RS0 853 aaKnown RBP27.94■■■□□ 2.06
SMAD6-202ENST00000557916 MRPL9Q9BYD2 267 aaKnown RBP27.94■■■□□ 2.06
SMAD6-202ENST00000557916 HAPLN2Q9GZV7 340 aa27.94■■■□□ 2.06
SMAD6-202ENST00000557916 TTYH1Q9H313 450 aaPredicted RBP27.94■■■□□ 2.06
SMAD6-202ENST00000557916 TISP43B9A030 160 aa27.93■■■□□ 2.06
SMAD6-202ENST00000557916 RHOBTB3O94955 611 aa27.93■■■□□ 2.06
SMAD6-202ENST00000557916 SMC2O95347 1197 aa27.93■■■□□ 2.06
SMAD6-202ENST00000557916 MLH1P40692 756 aa27.93■■■□□ 2.06
SMAD6-202ENST00000557916 GRM5P41594 1212 aa27.93■■■□□ 2.06
SMAD6-202ENST00000557916 SLFN12LQ6IEE8 588 aa27.93■■■□□ 2.06
SMAD6-202ENST00000557916 SPRED2Q7Z698 418 aa27.93■■■□□ 2.06
SMAD6-202ENST00000557916 LRRC43Q8N309 656 aa27.93■■■□□ 2.06
SMAD6-202ENST00000557916 URGCPQ8TCY9 931 aa27.93■■■□□ 2.06
SMAD6-202ENST00000557916 SCFD1Q8WVM8 642 aa27.93■■■□□ 2.06
SMAD6-202ENST00000557916 GAD1Q99259 594 aa27.93■■■□□ 2.06
SMAD6-202ENST00000557916 CCDC94Q9BW85 323 aaPredicted RBP27.93■■■□□ 2.06
SMAD6-202ENST00000557916 TYW1Q9NV66 732 aaKnown RBP27.93■■■□□ 2.06
SMAD6-202ENST00000557916 KLK14Q9P0G3 267 aa27.93■■■□□ 2.06
SMAD6-202ENST00000557916 FNDC1Q4ZHG4 1894 aaPredicted RBP27.93■■■□□ 2.06
SMAD6-202ENST00000557916 ARL5CA6NH57 179 aa27.92■■■□□ 2.06
SMAD6-202ENST00000557916 RECQL4O94761 1208 aa27.92■■■□□ 2.06
SMAD6-202ENST00000557916 AFF1P51825 1210 aaKnown RBP27.92■■■□□ 2.06
SMAD6-202ENST00000557916 OSTNP61366 133 aa27.92■■■□□ 2.06
SMAD6-202ENST00000557916 LRRC55Q6ZSA7 311 aa27.92■■■□□ 2.06
SMAD6-202ENST00000557916 KIAA0895Q8NCT3 520 aa27.92■■■□□ 2.06
SMAD6-202ENST00000557916 ERCC4Q92889 916 aaPredicted RBP27.92■■■□□ 2.06
SMAD6-202ENST00000557916 CERS4Q9HA82 394 aa27.92■■■□□ 2.06
SMAD6-202ENST00000557916 MTUS1Q9ULD2 1270 aa27.92■■■□□ 2.06
SMAD6-202ENST00000557916 PCDHA5Q9Y5H7 936 aa27.92■■■□□ 2.06
SMAD6-202ENST00000557916 STYXL1Q9Y6J8 313 aa27.92■■■□□ 2.06
SMAD6-202ENST00000557916 UBE4BO95155 1302 aa27.92■■■□□ 2.06
SMAD6-202ENST00000557916 A0A0B4J269 797 aa27.92■■■□□ 2.06
SMAD6-202ENST00000557916 HOXD13P35453 343 aa27.92■■■□□ 2.06
SMAD6-202ENST00000557916 ERVK-21P61565 698 aa27.92■■■□□ 2.06
SMAD6-202ENST00000557916 SPOUT1Q5T280 376 aaKnown RBP27.92■■■□□ 2.06
SMAD6-202ENST00000557916 CLP1Q92989 425 aaKnown RBP27.92■■■□□ 2.06
SMAD6-202ENST00000557916 SMARCE1Q969G3 411 aa27.92■■■□□ 2.06
SMAD6-202ENST00000557916 ZFP42Q96MM3 310 aa27.92■■■□□ 2.06
SMAD6-202ENST00000557916 C17orf80Q9BSJ5 609 aa27.92■■■□□ 2.06
SMAD6-202ENST00000557916 MSTO1Q9BUK6 570 aa27.92■■■□□ 2.06
SMAD6-202ENST00000557916 SEMA6BQ9H3T3 888 aa27.92■■■□□ 2.06
SMAD6-202ENST00000557916 TBC1D13Q9NVG8 400 aa27.92■■■□□ 2.06
SMAD6-202ENST00000557916 RMND1Q9NWS8 449 aa27.92■■■□□ 2.06
SMAD6-202ENST00000557916 KANSL3Q9P2N6 904 aa27.92■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms