RNA–Protein interactions for RNA: ENST00000557866.1

SPG11-204, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 2

Gene SPG11, Length 468 nt, Biotype non stop decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-204ENST00000557866 FIGNQ5HY92 759 aa8.07□□□□□ -1.12
SPG11-204ENST00000557866 FKBP15Q5T1M5 1219 aa8.07□□□□□ -1.12
SPG11-204ENST00000557866 GJC2Q5T442 439 aaPredicted RBP8.07□□□□□ -1.12
SPG11-204ENST00000557866 RGMBQ6NW40 437 aa8.07□□□□□ -1.12
SPG11-204ENST00000557866 STXBP4Q6ZWJ1 553 aa8.07□□□□□ -1.12
SPG11-204ENST00000557866 HAUS6Q7Z4H7 955 aa8.07□□□□□ -1.12
SPG11-204ENST00000557866 PLEKHH3Q7Z736 793 aa8.07□□□□□ -1.12
SPG11-204ENST00000557866 TRIM50Q86XT4 487 aa8.07□□□□□ -1.12
SPG11-204ENST00000557866 CNGA4Q8IV77 575 aa8.07□□□□□ -1.12
SPG11-204ENST00000557866 SLC9A9Q8IVB4 645 aa8.07□□□□□ -1.12
SPG11-204ENST00000557866 PLPP7Q8NBV4 271 aa8.07□□□□□ -1.12
SPG11-204ENST00000557866 RETREG2Q8NC44 543 aa8.07□□□□□ -1.12
SPG11-204ENST00000557866 ZSWIM2Q8NEG5 633 aa8.07□□□□□ -1.12
SPG11-204ENST00000557866 OR8K1Q8NGG5 319 aa8.07□□□□□ -1.12
SPG11-204ENST00000557866 NPLOC4Q8TAT6 608 aa8.07□□□□□ -1.12
SPG11-204ENST00000557866 ASAP3Q8TDY4 903 aa8.07□□□□□ -1.12
SPG11-204ENST00000557866 WHAMMQ8TF30 809 aa8.07□□□□□ -1.12
SPG11-204ENST00000557866 TMEM174Q8WUU8 243 aa8.07□□□□□ -1.12
SPG11-204ENST00000557866 KIFAP3Q92845 792 aa8.07□□□□□ -1.12
SPG11-204ENST00000557866 GTPBP3Q969Y2 492 aaKnown RBP8.07□□□□□ -1.12
SPG11-204ENST00000557866 PPP1R13BQ96KQ4 1090 aa8.07□□□□□ -1.12
SPG11-204ENST00000557866 CCDC43Q96MW1 224 aaKnown RBP8.07□□□□□ -1.12
SPG11-204ENST00000557866 ACCSQ96QU6 501 aa8.07□□□□□ -1.12
SPG11-204ENST00000557866 MPHOSPH6Q99547 160 aaKnown RBP8.07□□□□□ -1.12
SPG11-204ENST00000557866 DNAJC7Q99615 494 aa8.07□□□□□ -1.12
SPG11-204ENST00000557866 CHP1Q99653 195 aa8.07□□□□□ -1.12
SPG11-204ENST00000557866 NTPCRQ9BSD7 190 aaKnown RBP8.07□□□□□ -1.12
SPG11-204ENST00000557866 NUP58Q9BVL2 599 aa8.07□□□□□ -1.12
SPG11-204ENST00000557866 POLR3FQ9H1D9 316 aaPredicted RBP8.07□□□□□ -1.12
SPG11-204ENST00000557866 NUCKS1Q9H1E3 243 aaKnown RBP8.07□□□□□ -1.12
SPG11-204ENST00000557866 ATP6V0A4Q9HBG4 840 aa8.07□□□□□ -1.12
SPG11-204ENST00000557866 ARMCX3Q9UH62 379 aaPredicted RBP8.07□□□□□ -1.12
SPG11-204ENST00000557866 UTP18Q9Y5J1 556 aaKnown RBP eCLIP8.07□□□□□ -1.12
SPG11-204ENST00000557866 A0A0U1RQJ8 604 aa8.06□□□□□ -1.12
SPG11-204ENST00000557866 C11orf97A0A1B0GVM6 126 aaPredicted RBP8.06□□□□□ -1.12
SPG11-204ENST00000557866 A0A1W2PQJ5 194 aa8.06□□□□□ -1.12
SPG11-204ENST00000557866 DENND3A2RUS2 1198 aa8.06□□□□□ -1.12
SPG11-204ENST00000557866 CCDC169A6NNP5 214 aa8.06□□□□□ -1.12
SPG11-204ENST00000557866 ANKRD63C9JTQ0 380 aa8.06□□□□□ -1.12
SPG11-204ENST00000557866 GPR25O00155 361 aa8.06□□□□□ -1.12
SPG11-204ENST00000557866 NRDCO43847 1150 aa8.06□□□□□ -1.12
SPG11-204ENST00000557866 ARHGEF15O94989 841 aa8.06□□□□□ -1.12
SPG11-204ENST00000557866 AFPP02771 609 aaKnown RBP8.06□□□□□ -1.12
SPG11-204ENST00000557866 TPM1P09493 284 aa8.06□□□□□ -1.12
SPG11-204ENST00000557866 TXNP10599 105 aaKnown RBP8.06□□□□□ -1.12
SPG11-204ENST00000557866 EPB41P11171 864 aaKnown RBP8.06□□□□□ -1.12
SPG11-204ENST00000557866 GLRA2P23416 452 aa8.06□□□□□ -1.12
SPG11-204ENST00000557866 MARK3P27448 753 aa8.06□□□□□ -1.12
SPG11-204ENST00000557866 CYP2J2P51589 502 aa8.06□□□□□ -1.12
SPG11-204ENST00000557866 ZBED6P86452 979 aa8.06□□□□□ -1.12
SPG11-204ENST00000557866 DMP1Q13316 513 aaPredicted RBP8.06□□□□□ -1.12
SPG11-204ENST00000557866 MYBPC2Q14324 1141 aa8.06□□□□□ -1.12
SPG11-204ENST00000557866 TTLL4Q14679 1199 aa8.06□□□□□ -1.12
SPG11-204ENST00000557866 EMC2Q15006 297 aa8.06□□□□□ -1.12
SPG11-204ENST00000557866 FAM160B1Q5W0V3 765 aa8.06□□□□□ -1.12
SPG11-204ENST00000557866 SLC39A4Q6P5W5 647 aa8.06□□□□□ -1.12
SPG11-204ENST00000557866 C17orf99Q6UX52 265 aa8.06□□□□□ -1.12
SPG11-204ENST00000557866 HS2ST1Q7LGA3 356 aa8.06□□□□□ -1.12
SPG11-204ENST00000557866 MAP4K3Q8IVH8 894 aa8.06□□□□□ -1.12
SPG11-204ENST00000557866 C12orf56Q8IXR9 622 aa8.06□□□□□ -1.12
SPG11-204ENST00000557866 DHX37Q8IY37 1157 aaKnown RBP8.06□□□□□ -1.12
SPG11-204ENST00000557866 FAM186BQ8IYM0 893 aa8.06□□□□□ -1.12
SPG11-204ENST00000557866 SYCP3Q8IZU3 236 aa8.06□□□□□ -1.12
SPG11-204ENST00000557866 MCPH1Q8NEM0 835 aa8.06□□□□□ -1.12
SPG11-204ENST00000557866 GOLGA5Q8TBA6 731 aa8.06□□□□□ -1.12
SPG11-204ENST00000557866 SCFD2Q8WU76 684 aa8.06□□□□□ -1.12
SPG11-204ENST00000557866 ATRIPQ8WXE1 791 aa8.06□□□□□ -1.12
SPG11-204ENST00000557866 SLC35C1Q96A29 364 aa8.06□□□□□ -1.12
SPG11-204ENST00000557866 TMEM143Q96AN5 459 aa8.06□□□□□ -1.12
SPG11-204ENST00000557866 MAML3Q96JK9 1138 aa8.06□□□□□ -1.12
SPG11-204ENST00000557866 C16orf45Q96MC5 204 aaPredicted RBP8.06□□□□□ -1.12
SPG11-204ENST00000557866 SPATA33Q96N06 139 aa8.06□□□□□ -1.12
SPG11-204ENST00000557866 ZIC5Q96T25 663 aa8.06□□□□□ -1.12
SPG11-204ENST00000557866 CBWD1Q9BRT8 395 aa8.06□□□□□ -1.12
SPG11-204ENST00000557866 CRACR2AQ9BSW2 395 aa8.06□□□□□ -1.12
SPG11-204ENST00000557866 DESI2Q9BSY9 194 aa8.06□□□□□ -1.12
SPG11-204ENST00000557866 MKNK1Q9BUB5 465 aa8.06□□□□□ -1.12
SPG11-204ENST00000557866 LSM14BQ9BX40 385 aaKnown RBP8.06□□□□□ -1.12
SPG11-204ENST00000557866 NAA15Q9BXJ9 866 aaKnown RBP8.06□□□□□ -1.12
SPG11-204ENST00000557866 TMEM206Q9H813 350 aa8.06□□□□□ -1.12
SPG11-204ENST00000557866 MMRN2Q9H8L6 949 aa8.06□□□□□ -1.12
SPG11-204ENST00000557866 C17orf75Q9HAS0 396 aa8.06□□□□□ -1.12
SPG11-204ENST00000557866 ETNK1Q9HBU6 452 aa8.06□□□□□ -1.12
SPG11-204ENST00000557866 METTL14Q9HCE5 456 aaKnown RBP8.06□□□□□ -1.12
SPG11-204ENST00000557866 VTA1Q9NP79 307 aa8.06□□□□□ -1.12
SPG11-204ENST00000557866 KMT5AQ9NQR1 393 aa8.06□□□□□ -1.12
SPG11-204ENST00000557866 FAM207AQ9NSI2 230 aaPredicted RBP8.06□□□□□ -1.12
SPG11-204ENST00000557866 FAM184BQ9ULE4 1060 aa8.06□□□□□ -1.12
SPG11-204ENST00000557866 TBX20Q9UMR3 447 aa8.06□□□□□ -1.12
SPG11-204ENST00000557866 PPP2R2CQ9Y2T4 447 aa8.06□□□□□ -1.12
SPG11-204ENST00000557866 LUC7L2Q9Y383 392 aaKnown RBP8.06□□□□□ -1.12
SPG11-204ENST00000557866 SLC15A5A6NIM6 579 aa8.05□□□□□ -1.12
SPG11-204ENST00000557866 ACTN1P12814 892 aa8.05□□□□□ -1.12
SPG11-204ENST00000557866 TNNT1P13805 278 aa8.05□□□□□ -1.12
SPG11-204ENST00000557866 TRIM21P19474 475 aaKnown RBP8.05□□□□□ -1.12
SPG11-204ENST00000557866 ADSSP30520 456 aa8.05□□□□□ -1.12
SPG11-204ENST00000557866 MAPK4P31152 587 aa8.05□□□□□ -1.12
SPG11-204ENST00000557866 HNRNPH3P31942 346 aaKnown RBP8.05□□□□□ -1.12
SPG11-204ENST00000557866 PSMC2P35998 433 aaKnown RBP8.05□□□□□ -1.12
SPG11-204ENST00000557866 ADCYAP1R1P41586 468 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms