RNA–Protein interactions for RNA: ENST00000557703.5

SHMT2-234, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 542 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-234ENST00000557703 ZNF576Q9H609 170 aa14.99□□□□□ -0.01
SHMT2-234ENST00000557703 GRXCR1A8MXD5 290 aa14.98□□□□□ -0.01
SHMT2-234ENST00000557703 C5orf67F2Z3F1 127 aa14.98□□□□□ -0.01
SHMT2-234ENST00000557703 PRPF40AO75400 957 aaKnown RBP14.98□□□□□ -0.01
SHMT2-234ENST00000557703 OFD1O75665 1012 aa14.98□□□□□ -0.01
SHMT2-234ENST00000557703 LDHAP00338 332 aaKnown RBP14.98□□□□□ -0.01
SHMT2-234ENST00000557703 RPN1P04843 607 aaKnown RBP14.98□□□□□ -0.01
SHMT2-234ENST00000557703 CA3P07451 260 aa14.98□□□□□ -0.01
SHMT2-234ENST00000557703 LIG1P18858 919 aa14.98□□□□□ -0.01
SHMT2-234ENST00000557703 GARTP22102 1010 aa14.98□□□□□ -0.01
SHMT2-234ENST00000557703 GRM5P41594 1212 aa14.98□□□□□ -0.01
SHMT2-234ENST00000557703 RABGGTBP53611 331 aa14.98□□□□□ -0.01
SHMT2-234ENST00000557703 YARSP54577 528 aaKnown RBP14.98□□□□□ -0.01
SHMT2-234ENST00000557703 NOLC1Q14978 699 aaKnown RBP eCLIP14.98□□□□□ -0.01
SHMT2-234ENST00000557703 BMT2Q1RMZ1 405 aa14.98□□□□□ -0.01
SHMT2-234ENST00000557703 ZNF568Q3ZCX4 644 aa14.98□□□□□ -0.01
SHMT2-234ENST00000557703 PPP2R2DQ66LE6 453 aa14.98□□□□□ -0.01
SHMT2-234ENST00000557703 EPM2AIP1Q7L775 607 aaPredicted RBP14.98□□□□□ -0.01
SHMT2-234ENST00000557703 CD302Q8IX05 232 aa14.98□□□□□ -0.01
SHMT2-234ENST00000557703 TMEM174Q8WUU8 243 aa14.98□□□□□ -0.01
SHMT2-234ENST00000557703 P2RX5Q93086 422 aa14.98□□□□□ -0.01
SHMT2-234ENST00000557703 CASD1Q96PB1 797 aa14.98□□□□□ -0.01
SHMT2-234ENST00000557703 EIF2AQ9BY44 585 aaKnown RBP14.98□□□□□ -0.01
SHMT2-234ENST00000557703 PLEKHA5Q9HAU0 1116 aa14.98□□□□□ -0.01
SHMT2-234ENST00000557703 A0A0B4J269 797 aa14.97□□□□□ -0.01
SHMT2-234ENST00000557703 LINC01553A4QN01 128 aa14.97□□□□□ -0.01
SHMT2-234ENST00000557703 TBKBP1A7MCY6 615 aa14.97□□□□□ -0.01
SHMT2-234ENST00000557703 ABLIM1O14639 778 aa14.97□□□□□ -0.01
SHMT2-234ENST00000557703 KLRC4O43908 158 aa14.97□□□□□ -0.01
SHMT2-234ENST00000557703 NR1I2O75469 434 aa14.97□□□□□ -0.01
SHMT2-234ENST00000557703 NPTXRO95502 500 aa14.97□□□□□ -0.01
SHMT2-234ENST00000557703 CLTAP09496 248 aa14.97□□□□□ -0.01
SHMT2-234ENST00000557703 LAG3P18627 525 aa14.97□□□□□ -0.01
SHMT2-234ENST00000557703 PPM1AP35813 382 aa14.97□□□□□ -0.01
SHMT2-234ENST00000557703 PPP1R2P41236 205 aa14.97□□□□□ -0.01
SHMT2-234ENST00000557703 TAP1Q03518 808 aa14.97□□□□□ -0.01
SHMT2-234ENST00000557703 NOMO2Q5JPE7 1267 aa14.97□□□□□ -0.01
SHMT2-234ENST00000557703 FAM117BQ6P1L5 589 aa14.97□□□□□ -0.01
SHMT2-234ENST00000557703 AGMOQ6ZNB7 445 aa14.97□□□□□ -0.01
SHMT2-234ENST00000557703 SYCP3Q8IZU3 236 aa14.97□□□□□ -0.01
SHMT2-234ENST00000557703 ACAP3Q96P50 834 aa14.97□□□□□ -0.01
SHMT2-234ENST00000557703 GBP3Q9H0R5 595 aa14.97□□□□□ -0.01
SHMT2-234ENST00000557703 BLZF1Q9H2G9 400 aa14.97□□□□□ -0.01
SHMT2-234ENST00000557703 SEMA6BQ9H3T3 888 aa14.97□□□□□ -0.01
SHMT2-234ENST00000557703 LMCD1Q9NZU5 365 aa14.97□□□□□ -0.01
SHMT2-234ENST00000557703 YBX2Q9Y2T7 364 aaKnown RBP14.97□□□□□ -0.01
SHMT2-234ENST00000557703 PCDHB12Q9Y5F1 795 aa14.97□□□□□ -0.01
SHMT2-234ENST00000557703 PTPRSQ13332 1948 aa14.97□□□□□ -0.01
SHMT2-234ENST00000557703 SOX1O00570 391 aaPredicted RBP14.96□□□□□ -0.01
SHMT2-234ENST00000557703 OGTO15294 1046 aa14.96□□□□□ -0.01
SHMT2-234ENST00000557703 PTMSP20962 102 aa14.96□□□□□ -0.01
SHMT2-234ENST00000557703 BMPR1AP36894 532 aa14.96□□□□□ -0.01
SHMT2-234ENST00000557703 PBX2P40425 430 aa14.96□□□□□ -0.01
SHMT2-234ENST00000557703 KMT5BQ4FZB7 885 aa14.96□□□□□ -0.01
SHMT2-234ENST00000557703 ZC2HC1CQ53FD0 456 aaPredicted RBP14.96□□□□□ -0.01
SHMT2-234ENST00000557703 COBLL1Q53SF7 1204 aa14.96□□□□□ -0.01
SHMT2-234ENST00000557703 CLLU1OSQ5K130 101 aa14.96□□□□□ -0.01
SHMT2-234ENST00000557703 HS2ST1Q7LGA3 356 aa14.96□□□□□ -0.01
SHMT2-234ENST00000557703 RNF169Q8NCN4 708 aa14.96□□□□□ -0.01
SHMT2-234ENST00000557703 TMEM175Q9BSA9 504 aa14.96□□□□□ -0.01
SHMT2-234ENST00000557703 C11orf84Q9BUA3 381 aaPredicted RBP14.96□□□□□ -0.01
SHMT2-234ENST00000557703 CDT1Q9H211 546 aa14.96□□□□□ -0.01
SHMT2-234ENST00000557703 NKX2-4Q9H2Z4 354 aa14.96□□□□□ -0.01
SHMT2-234ENST00000557703 KIAA1586Q9HCI6 787 aa14.96□□□□□ -0.01
SHMT2-234ENST00000557703 RNF19AQ9NV58 838 aa14.96□□□□□ -0.01
SHMT2-234ENST00000557703 FNDC1Q4ZHG4 1894 aaPredicted RBP14.95□□□□□ -0.02
SHMT2-234ENST00000557703 ARL5CA6NH57 179 aa14.95□□□□□ -0.02
SHMT2-234ENST00000557703 TTLL13PA6NNM8 815 aa14.95□□□□□ -0.02
SHMT2-234ENST00000557703 EDN1P05305 212 aa14.95□□□□□ -0.02
SHMT2-234ENST00000557703 FGFR1P11362 822 aa14.95□□□□□ -0.02
SHMT2-234ENST00000557703 POU3F3P20264 500 aaPredicted RBP14.95□□□□□ -0.02
SHMT2-234ENST00000557703 MATR3P43243 847 aaKnown RBP eCLIP14.95□□□□□ -0.02
SHMT2-234ENST00000557703 ALDH7A1P49419 539 aaKnown RBP14.95□□□□□ -0.02
SHMT2-234ENST00000557703 UBE3AQ05086 875 aa14.95□□□□□ -0.02
SHMT2-234ENST00000557703 RNASELQ05823 741 aaKnown RBP14.95□□□□□ -0.02
SHMT2-234ENST00000557703 GRIK3Q13003 919 aa14.95□□□□□ -0.02
SHMT2-234ENST00000557703 MYBPC2Q14324 1141 aa14.95□□□□□ -0.02
SHMT2-234ENST00000557703 KNOP1Q1ED39 458 aaKnown RBP14.95□□□□□ -0.02
SHMT2-234ENST00000557703 XKR4Q5GH76 650 aa14.95□□□□□ -0.02
SHMT2-234ENST00000557703 EEF1DP3Q658K8 133 aa14.95□□□□□ -0.02
SHMT2-234ENST00000557703 C12orf56Q8IXR9 622 aa14.95□□□□□ -0.02
SHMT2-234ENST00000557703 TMEM192Q8IY95 271 aa14.95□□□□□ -0.02
SHMT2-234ENST00000557703 SMARCE1Q969G3 411 aa14.95□□□□□ -0.02
SHMT2-234ENST00000557703 FAM193BQ96PV7 902 aaPredicted RBP14.95□□□□□ -0.02
SHMT2-234ENST00000557703 RPS6KC1Q96S38 1066 aa14.95□□□□□ -0.02
SHMT2-234ENST00000557703 NXF3Q9H4D5 531 aaKnown RBP14.95□□□□□ -0.02
SHMT2-234ENST00000557703 SLC38A7Q9NVC3 462 aa14.95□□□□□ -0.02
SHMT2-234ENST00000557703 PARP2Q9UGN5 583 aa14.95□□□□□ -0.02
SHMT2-234ENST00000557703 PDXKO00764 312 aa14.94□□□□□ -0.02
SHMT2-234ENST00000557703 GADD45BO75293 160 aaPredicted RBP14.94□□□□□ -0.02
SHMT2-234ENST00000557703 THP07101 528 aa14.94□□□□□ -0.02
SHMT2-234ENST00000557703 ADRB2P07550 413 aa14.94□□□□□ -0.02
SHMT2-234ENST00000557703 MYBP10242 640 aa14.94□□□□□ -0.02
SHMT2-234ENST00000557703 ALKAL1Q6UXT8 129 aa14.94□□□□□ -0.02
SHMT2-234ENST00000557703 TMCO2Q7Z6W1 182 aaPredicted RBP14.94□□□□□ -0.02
SHMT2-234ENST00000557703 NT5DC4Q86YG4 428 aa14.94□□□□□ -0.02
SHMT2-234ENST00000557703 GRAMD1CQ8IYS0 662 aa14.94□□□□□ -0.02
SHMT2-234ENST00000557703 GUF1Q8N442 669 aaKnown RBP14.94□□□□□ -0.02
SHMT2-234ENST00000557703 TRIML1Q8N9V2 468 aa14.94□□□□□ -0.02
SHMT2-234ENST00000557703 HELQQ8TDG4 1101 aa14.94□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms