RNA–Protein interactions for RNA: ENST00000557644.5

NEDD1-213, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 1 (best) BASIC

Gene NEDD1, Length 2,367 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-213ENST00000557644 PCIF1Q9H4Z3 704 aa16.71■□□□□ 0.27
NEDD1-213ENST00000557644 AGPAT3Q9NRZ7 376 aa16.71■□□□□ 0.27
NEDD1-213ENST00000557644 C1orf112Q9NSG2 853 aa16.71■□□□□ 0.27
NEDD1-213ENST00000557644 STYXL1Q9Y6J8 313 aa16.71■□□□□ 0.27
NEDD1-213ENST00000557644 SYCE3A1L190 88 aa16.71■□□□□ 0.26
NEDD1-213ENST00000557644 UPP2O95045 317 aa16.71■□□□□ 0.26
NEDD1-213ENST00000557644 FAM189BP81408 668 aa16.71■□□□□ 0.26
NEDD1-213ENST00000557644 COBLL1Q53SF7 1204 aa16.71■□□□□ 0.26
NEDD1-213ENST00000557644 CHRDL2Q6WN34 429 aa16.71■□□□□ 0.26
NEDD1-213ENST00000557644 THNSL1Q8IYQ7 743 aa16.71■□□□□ 0.26
NEDD1-213ENST00000557644 TRIM49BA6NDI0 452 aa16.7■□□□□ 0.26
NEDD1-213ENST00000557644 AKAP5P24588 427 aa16.7■□□□□ 0.26
NEDD1-213ENST00000557644 KCNJ6P48051 423 aa16.7■□□□□ 0.26
NEDD1-213ENST00000557644 NLRP12P59046 1061 aa16.7■□□□□ 0.26
NEDD1-213ENST00000557644 RASIP1Q5U651 963 aa16.7■□□□□ 0.26
NEDD1-213ENST00000557644 FAM117BQ6P1L5 589 aa16.7■□□□□ 0.26
NEDD1-213ENST00000557644 CRIPAKQ8N1N5 446 aa16.7■□□□□ 0.26
NEDD1-213ENST00000557644 RNPC3Q96LT9 517 aaKnown RBP16.7■□□□□ 0.26
NEDD1-213ENST00000557644 MSTO1Q9BUK6 570 aa16.7■□□□□ 0.26
NEDD1-213ENST00000557644 TYW1Q9NV66 732 aaKnown RBP16.7■□□□□ 0.26
NEDD1-213ENST00000557644 FAM189A1O60320 539 aa16.7■□□□□ 0.26
NEDD1-213ENST00000557644 EFCAB14O75071 495 aa16.7■□□□□ 0.26
NEDD1-213ENST00000557644 KIF20AO95235 890 aa16.7■□□□□ 0.26
NEDD1-213ENST00000557644 ZSCAN23Q3MJ62 389 aa16.7■□□□□ 0.26
NEDD1-213ENST00000557644 DCAF4L1Q3SXM0 396 aa16.7■□□□□ 0.26
NEDD1-213ENST00000557644 ARMCX5Q6P1M9 558 aa16.7■□□□□ 0.26
NEDD1-213ENST00000557644 SASS6Q6UVJ0 657 aa16.7■□□□□ 0.26
NEDD1-213ENST00000557644 HS2ST1Q7LGA3 356 aa16.7■□□□□ 0.26
NEDD1-213ENST00000557644 ZNF598Q86UK7 904 aaKnown RBP16.7■□□□□ 0.26
NEDD1-213ENST00000557644 SAAL1Q96ER3 474 aa16.7■□□□□ 0.26
NEDD1-213ENST00000557644 EEF2KMTQ96G04 330 aa16.7■□□□□ 0.26
NEDD1-213ENST00000557644 GTPBP4Q9BZE4 634 aaKnown RBP16.7■□□□□ 0.26
NEDD1-213ENST00000557644 SNTG2Q9NY99 539 aa16.7■□□□□ 0.26
NEDD1-213ENST00000557644 CTNND2Q9UQB3 1225 aa16.7■□□□□ 0.26
NEDD1-213ENST00000557644 TTC3P53804 2025 aa16.69■□□□□ 0.26
NEDD1-213ENST00000557644 ZNF623O75123 536 aa16.69■□□□□ 0.26
NEDD1-213ENST00000557644 AMHP03971 560 aa16.69■□□□□ 0.26
NEDD1-213ENST00000557644 MCF2P10911 925 aa16.69■□□□□ 0.26
NEDD1-213ENST00000557644 FGFR1P11362 822 aa16.69■□□□□ 0.26
NEDD1-213ENST00000557644 TNFSF9P41273 254 aa16.69■□□□□ 0.26
NEDD1-213ENST00000557644 ZCWPW2Q504Y3 356 aa16.69■□□□□ 0.26
NEDD1-213ENST00000557644 CENPPQ6IPU0 288 aa16.69■□□□□ 0.26
NEDD1-213ENST00000557644 TOP1MTQ969P6 601 aa16.69■□□□□ 0.26
NEDD1-213ENST00000557644 GZF1Q9H116 711 aaPredicted RBP16.69■□□□□ 0.26
NEDD1-213ENST00000557644 RNF19AQ9NV58 838 aa16.69■□□□□ 0.26
NEDD1-213ENST00000557644 AGO2Q9UKV8 859 aaKnown RBP16.69■□□□□ 0.26
NEDD1-213ENST00000557644 SLC4A7Q9Y6M7 1214 aa16.69■□□□□ 0.26
NEDD1-213ENST00000557644 GOLGA8IPA6NC78 632 aa16.69■□□□□ 0.26
NEDD1-213ENST00000557644 GOLGA8JA6NMD2 632 aa16.69■□□□□ 0.26
NEDD1-213ENST00000557644 PDXKO00764 312 aa16.69■□□□□ 0.26
NEDD1-213ENST00000557644 ACOT2P49753 483 aa16.69■□□□□ 0.26
NEDD1-213ENST00000557644 RAB27AP51159 221 aa16.69■□□□□ 0.26
NEDD1-213ENST00000557644 CYP2J2P51589 502 aa16.69■□□□□ 0.26
NEDD1-213ENST00000557644 STX17P56962 302 aa16.69■□□□□ 0.26
NEDD1-213ENST00000557644 STIM1Q13586 685 aa16.69■□□□□ 0.26
NEDD1-213ENST00000557644 ANKRD40Q6AI12 368 aa16.69■□□□□ 0.26
NEDD1-213ENST00000557644 FAM109BQ6ICB4 259 aaPredicted RBP16.69■□□□□ 0.26
NEDD1-213ENST00000557644 SLFN12LQ6IEE8 588 aa16.69■□□□□ 0.26
NEDD1-213ENST00000557644 AGMOQ6ZNB7 445 aa16.69■□□□□ 0.26
NEDD1-213ENST00000557644 NOC3LQ8WTT2 800 aaKnown RBP16.69■□□□□ 0.26
NEDD1-213ENST00000557644 NELFBQ8WX92 580 aa16.69■□□□□ 0.26
NEDD1-213ENST00000557644 CXCL16Q9H2A7 254 aa16.69■□□□□ 0.26
NEDD1-213ENST00000557644 PCDHB7Q9Y5E2 793 aa16.69■□□□□ 0.26
NEDD1-213ENST00000557644 PSMA7O14818 248 aa16.68■□□□□ 0.26
NEDD1-213ENST00000557644 GARTP22102 1010 aa16.68■□□□□ 0.26
NEDD1-213ENST00000557644 BMP8BP34820 402 aa16.68■□□□□ 0.26
NEDD1-213ENST00000557644 GATMP50440 423 aa16.68■□□□□ 0.26
NEDD1-213ENST00000557644 AFF1P51825 1210 aaKnown RBP16.68■□□□□ 0.26
NEDD1-213ENST00000557644 TYRO3Q06418 890 aa16.68■□□□□ 0.26
NEDD1-213ENST00000557644 MRPL10Q7Z7H8 261 aaKnown RBP16.68■□□□□ 0.26
NEDD1-213ENST00000557644 MLKLQ8NB16 471 aa16.68■□□□□ 0.26
NEDD1-213ENST00000557644 P2RX5Q93086 422 aa16.68■□□□□ 0.26
NEDD1-213ENST00000557644 MED15Q96RN5 788 aa16.68■□□□□ 0.26
NEDD1-213ENST00000557644 PRO3102Q9H379 93 aa16.68■□□□□ 0.26
NEDD1-213ENST00000557644 TMEM161AQ9NX61 479 aa16.68■□□□□ 0.26
NEDD1-213ENST00000557644 HSPBP1Q9NZL4 362 aa16.68■□□□□ 0.26
NEDD1-213ENST00000557644 TRAF3IP3Q9Y228 551 aa16.68■□□□□ 0.26
NEDD1-213ENST00000557644 OGTO15294 1046 aa16.67■□□□□ 0.26
NEDD1-213ENST00000557644 MEFVO15553 781 aaPredicted RBP16.67■□□□□ 0.26
NEDD1-213ENST00000557644 STAG3L1P0CL83 205 aa16.67■□□□□ 0.26
NEDD1-213ENST00000557644 DHTKD1Q96HY7 919 aaPredicted RBP16.67■□□□□ 0.26
NEDD1-213ENST00000557644 FAM213AQ9BRX8 229 aa16.67■□□□□ 0.26
NEDD1-213ENST00000557644 KLK14Q9P0G3 267 aa16.67■□□□□ 0.26
NEDD1-213ENST00000557644 PARP2Q9UGN5 583 aa16.67■□□□□ 0.26
NEDD1-213ENST00000557644 LRFN2Q9ULH4 789 aa16.67■□□□□ 0.26
NEDD1-213ENST00000557644 GRXCR1A8MXD5 290 aa16.67■□□□□ 0.26
NEDD1-213ENST00000557644 RECQL4O94761 1208 aa16.67■□□□□ 0.26
NEDD1-213ENST00000557644 NR3C1P04150 777 aa16.67■□□□□ 0.26
NEDD1-213ENST00000557644 SKIP12755 728 aa16.67■□□□□ 0.26
NEDD1-213ENST00000557644 ITGA4P13612 1032 aa16.67■□□□□ 0.26
NEDD1-213ENST00000557644 ATP2A2P16615 1042 aaKnown RBP16.67■□□□□ 0.26
NEDD1-213ENST00000557644 CCNE1P24864 410 aa16.67■□□□□ 0.26
NEDD1-213ENST00000557644 GRM5P41594 1212 aa16.67■□□□□ 0.26
NEDD1-213ENST00000557644 CLLU1OSQ5K130 101 aa16.67■□□□□ 0.26
NEDD1-213ENST00000557644 CRELD2Q6UXH1 353 aaPredicted RBP16.67■□□□□ 0.26
NEDD1-213ENST00000557644 FAM43BQ6ZT52 329 aaPredicted RBP16.67■□□□□ 0.26
NEDD1-213ENST00000557644 C11orf57Q6ZUT1 292 aaPredicted RBP16.67■□□□□ 0.26
NEDD1-213ENST00000557644 NPAS4Q8IUM7 802 aa16.67■□□□□ 0.26
NEDD1-213ENST00000557644 MTIF3Q9H2K0 278 aaKnown RBP16.67■□□□□ 0.26
NEDD1-213ENST00000557644 ELAC1Q9H777 363 aaKnown RBP16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms