RNA–Protein interactions for RNA: ENST00000557588.5

ABCD4-228, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3 BASIC

Gene ABCD4, Length 763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-228ENST00000557588 M0R2N6 131 aa20.47■□□□□ 0.87
ABCD4-228ENST00000557588 EML1O00423 815 aa20.47■□□□□ 0.87
ABCD4-228ENST00000557588 DKC1O60832 514 aaKnown RBP eCLIP20.47■□□□□ 0.87
ABCD4-228ENST00000557588 ZMYND10O75800 440 aa20.47■□□□□ 0.87
ABCD4-228ENST00000557588 ERLIN2O94905 339 aa20.47■□□□□ 0.87
ABCD4-228ENST00000557588 AXLP30530 894 aa20.47■□□□□ 0.87
ABCD4-228ENST00000557588 FUT10Q6P4F1 479 aa20.47■□□□□ 0.87
ABCD4-228ENST00000557588 RNF149Q8NC42 400 aa20.47■□□□□ 0.87
ABCD4-228ENST00000557588 FGF14Q92915 247 aa20.47■□□□□ 0.87
ABCD4-228ENST00000557588 COLEC11Q9BWP8 271 aa20.47■□□□□ 0.87
ABCD4-228ENST00000557588 WRAP73Q9P2S5 460 aaPredicted RBP20.47■□□□□ 0.87
ABCD4-228ENST00000557588 DDX25Q9UHL0 483 aaKnown RBP20.47■□□□□ 0.87
ABCD4-228ENST00000557588 FBXO4Q9UKT5 387 aa20.47■□□□□ 0.87
ABCD4-228ENST00000557588 ZMYM2Q9UBW7 1377 aa20.46■□□□□ 0.87
ABCD4-228ENST00000557588 LRRN2O75325 713 aa20.46■□□□□ 0.87
ABCD4-228ENST00000557588 FSHRP23945 695 aa20.46■□□□□ 0.87
ABCD4-228ENST00000557588 EMC2Q15006 297 aa20.46■□□□□ 0.87
ABCD4-228ENST00000557588 RSPO4Q2I0M5 234 aaPredicted RBP20.46■□□□□ 0.87
ABCD4-228ENST00000557588 USP41Q3LFD5 358 aa20.46■□□□□ 0.87
ABCD4-228ENST00000557588 NOTUMQ6P988 496 aa20.46■□□□□ 0.87
ABCD4-228ENST00000557588 FERMT3Q86UX7 667 aa20.46■□□□□ 0.87
ABCD4-228ENST00000557588 DAGLBQ8NCG7 672 aa20.46■□□□□ 0.87
ABCD4-228ENST00000557588 TCP11Q8WWU5 503 aa20.46■□□□□ 0.87
ABCD4-228ENST00000557588 KCNB2Q92953 911 aa20.46■□□□□ 0.87
ABCD4-228ENST00000557588 GPR62Q9BZJ7 368 aa20.46■□□□□ 0.87
ABCD4-228ENST00000557588 MIOSQ9NXC5 875 aa20.46■□□□□ 0.87
ABCD4-228ENST00000557588 FBXW11Q9UKB1 542 aa20.46■□□□□ 0.87
ABCD4-228ENST00000557588 HES2Q9Y543 173 aa20.46■□□□□ 0.87
ABCD4-228ENST00000557588 ZFHX4Q86UP3 3567 aa20.46■□□□□ 0.87
ABCD4-228ENST00000557588 KANSL1LA0AUZ9 987 aa20.45■□□□□ 0.86
ABCD4-228ENST00000557588 ASAP2O43150 1006 aa20.45■□□□□ 0.86
ABCD4-228ENST00000557588 SLC37A4O43826 429 aa20.45■□□□□ 0.86
ABCD4-228ENST00000557588 GPC5P78333 572 aa20.45■□□□□ 0.86
ABCD4-228ENST00000557588 PARM1Q6UWI2 310 aa20.45■□□□□ 0.86
ABCD4-228ENST00000557588 RPP25Q9BUL9 199 aaKnown RBP20.45■□□□□ 0.86
ABCD4-228ENST00000557588 BCO2Q9BYV7 579 aa20.45■□□□□ 0.86
ABCD4-228ENST00000557588 OSBPL6Q9BZF3 934 aa20.45■□□□□ 0.86
ABCD4-228ENST00000557588 CSRNP2Q9H175 543 aa20.45■□□□□ 0.86
ABCD4-228ENST00000557588 KCNMB3Q9NPA1 279 aa20.45■□□□□ 0.86
ABCD4-228ENST00000557588 BMP2KQ9NSY1 1161 aaPredicted RBP20.45■□□□□ 0.86
ABCD4-228ENST00000557588 ADAM28Q9UKQ2 775 aa20.45■□□□□ 0.86
ABCD4-228ENST00000557588 CDH7Q9ULB5 785 aa20.45■□□□□ 0.86
ABCD4-228ENST00000557588 GIT1Q9Y2X7 761 aa20.45■□□□□ 0.86
ABCD4-228ENST00000557588 DOCK6Q96HP0 2047 aa20.44■□□□□ 0.86
ABCD4-228ENST00000557588 P4HBP07237 508 aaKnown RBP20.44■□□□□ 0.86
ABCD4-228ENST00000557588 PTENP60484 403 aa20.44■□□□□ 0.86
ABCD4-228ENST00000557588 PRKCQQ04759 706 aa20.44■□□□□ 0.86
ABCD4-228ENST00000557588 NPY5RQ15761 445 aa20.44■□□□□ 0.86
ABCD4-228ENST00000557588 BLOC1S2Q6QNY1 142 aa20.44■□□□□ 0.86
ABCD4-228ENST00000557588 MTSS1LQ765P7 747 aa20.44■□□□□ 0.86
ABCD4-228ENST00000557588 IFNLR1Q8IU57 520 aaPredicted RBP20.44■□□□□ 0.86
ABCD4-228ENST00000557588 GLYCTKQ8IVS8 523 aa20.44■□□□□ 0.86
ABCD4-228ENST00000557588 C4orf19Q8IY42 314 aa20.44■□□□□ 0.86
ABCD4-228ENST00000557588 BLIDQ8IZY5 108 aa20.44■□□□□ 0.86
ABCD4-228ENST00000557588 GSTCDQ8NEC7 633 aa20.44■□□□□ 0.86
ABCD4-228ENST00000557588 ST13P5Q8NFI4 369 aaPredicted RBP20.44■□□□□ 0.86
ABCD4-228ENST00000557588 JAKMIP1Q96N16 626 aaKnown RBP20.44■□□□□ 0.86
ABCD4-228ENST00000557588 CNTNAP3BQ96NU0 1288 aa20.44■□□□□ 0.86
ABCD4-228ENST00000557588 CNTNAP3Q9BZ76 1288 aa20.44■□□□□ 0.86
ABCD4-228ENST00000557588 NXF3Q9H4D5 531 aaKnown RBP20.44■□□□□ 0.86
ABCD4-228ENST00000557588 SPATA6Q9NWH7 488 aaPredicted RBP20.44■□□□□ 0.86
ABCD4-228ENST00000557588 PCDHGA2Q9Y5H1 932 aa20.44■□□□□ 0.86
ABCD4-228ENST00000557588 SPTBN2O15020 2390 aa20.44■□□□□ 0.86
ABCD4-228ENST00000557588 LAMTOR5O43504 91 aa20.43■□□□□ 0.86
ABCD4-228ENST00000557588 HNRNPA1P09651 372 aaKnown RBP eCLIP20.43■□□□□ 0.86
ABCD4-228ENST00000557588 RPL17P18621 184 aaKnown RBP20.43■□□□□ 0.86
ABCD4-228ENST00000557588 SDHBP21912 280 aa20.43■□□□□ 0.86
ABCD4-228ENST00000557588 YWHABP31946 246 aaKnown RBP20.43■□□□□ 0.86
ABCD4-228ENST00000557588 MAGEA9P43362 315 aa20.43■□□□□ 0.86
ABCD4-228ENST00000557588 EVCP57679 992 aa20.43■□□□□ 0.86
ABCD4-228ENST00000557588 GRIK3Q13003 919 aa20.43■□□□□ 0.86
ABCD4-228ENST00000557588 MLF2Q15773 248 aaPredicted RBP20.43■□□□□ 0.86
ABCD4-228ENST00000557588 VARS2Q5ST30 1063 aaKnown RBP20.43■□□□□ 0.86
ABCD4-228ENST00000557588 GRASPQ7Z6J2 395 aaPredicted RBP20.43■□□□□ 0.86
ABCD4-228ENST00000557588 HACE1Q8IYU2 909 aa20.43■□□□□ 0.86
ABCD4-228ENST00000557588 FAM177A1Q8N128 213 aaPredicted RBP20.43■□□□□ 0.86
ABCD4-228ENST00000557588 GPR161Q8N6U8 529 aaKnown RBP20.43■□□□□ 0.86
ABCD4-228ENST00000557588 CPB2Q96IY4 423 aa20.43■□□□□ 0.86
ABCD4-228ENST00000557588 FAM20AQ96MK3 541 aa20.43■□□□□ 0.86
ABCD4-228ENST00000557588 LXNQ9BS40 222 aa20.43■□□□□ 0.86
ABCD4-228ENST00000557588 NCOA5Q9HCD5 579 aaKnown RBP20.43■□□□□ 0.86
ABCD4-228ENST00000557588 NCDNQ9UBB6 729 aa20.43■□□□□ 0.86
ABCD4-228ENST00000557588 RPS6KB1P23443 525 aa20.42■□□□□ 0.86
ABCD4-228ENST00000557588 PDIA3P30101 505 aaKnown RBP20.42■□□□□ 0.86
ABCD4-228ENST00000557588 HOXA9P31269 272 aa20.42■□□□□ 0.86
ABCD4-228ENST00000557588 SNW1Q13573 536 aaKnown RBP20.42■□□□□ 0.86
ABCD4-228ENST00000557588 MXD4Q14582 209 aaPredicted RBP20.42■□□□□ 0.86
ABCD4-228ENST00000557588 AMHR2Q16671 573 aa20.42■□□□□ 0.86
ABCD4-228ENST00000557588 RTP2Q5QGT7 225 aa20.42■□□□□ 0.86
ABCD4-228ENST00000557588 RSPO2Q6UXX9 243 aaPredicted RBP20.42■□□□□ 0.86
ABCD4-228ENST00000557588 TRIM22Q8IYM9 498 aa20.42■□□□□ 0.86
ABCD4-228ENST00000557588 ZBTB44Q8NCP5 570 aa20.42■□□□□ 0.86
ABCD4-228ENST00000557588 FGF13Q92913 245 aa20.42■□□□□ 0.86
ABCD4-228ENST00000557588 YTHDC1Q96MU7 727 aaKnown RBP20.42■□□□□ 0.86
ABCD4-228ENST00000557588 APOL6Q9BWW8 343 aa20.42■□□□□ 0.86
ABCD4-228ENST00000557588 SF3B1O75533 1304 aaKnown RBP eCLIP20.42■□□□□ 0.86
ABCD4-228ENST00000557588 POU2F2P09086 479 aa20.41■□□□□ 0.86
ABCD4-228ENST00000557588 PFKPQ01813 784 aa20.41■□□□□ 0.86
ABCD4-228ENST00000557588 MBTD1Q05BQ5 628 aa20.41■□□□□ 0.86
ABCD4-228ENST00000557588 POU5F1BQ06416 359 aa20.41■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms