RNA–Protein interactions for RNA: ENST00000557572.1

FOXN3-217, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-217ENST00000557572 A0A0U1RQG5 324 aaPredicted RBP4.48□□□□□ -1.69
FOXN3-217ENST00000557572 WIPF3A6NGB9 483 aa4.48□□□□□ -1.69
FOXN3-217ENST00000557572 HIP1RO75146 1068 aa4.48□□□□□ -1.69
FOXN3-217ENST00000557572 CRTAMO95727 393 aa4.48□□□□□ -1.69
FOXN3-217ENST00000557572 APPP05067 770 aa4.48□□□□□ -1.69
FOXN3-217ENST00000557572 FDXRP22570 491 aa4.48□□□□□ -1.69
FOXN3-217ENST00000557572 RGS3P49796 1198 aa4.48□□□□□ -1.69
FOXN3-217ENST00000557572 FOXG1P55316 489 aaPredicted RBP4.48□□□□□ -1.69
FOXN3-217ENST00000557572 CCDC181Q5TID7 509 aa4.48□□□□□ -1.69
FOXN3-217ENST00000557572 Q6ZNX1 250 aa4.48□□□□□ -1.69
FOXN3-217ENST00000557572 PTF1AQ7RTS3 328 aa4.48□□□□□ -1.69
FOXN3-217ENST00000557572 OVCH1Q7RTY7 1134 aa4.48□□□□□ -1.69
FOXN3-217ENST00000557572 JAZF1Q86VZ6 243 aa4.48□□□□□ -1.69
FOXN3-217ENST00000557572 OR5M3Q8NGP4 307 aa4.48□□□□□ -1.69
FOXN3-217ENST00000557572 EVI5LQ96CN4 794 aa4.48□□□□□ -1.69
FOXN3-217ENST00000557572 IPO9Q96P70 1041 aaKnown RBP4.48□□□□□ -1.69
FOXN3-217ENST00000557572 CDC6Q99741 560 aa4.48□□□□□ -1.69
FOXN3-217ENST00000557572 SPON1Q9HCB6 807 aa4.48□□□□□ -1.69
FOXN3-217ENST00000557572 ARPP21Q9UBL0 812 aaPredicted RBP4.48□□□□□ -1.69
FOXN3-217ENST00000557572 B4E1Z4 1266 aa4.47□□□□□ -1.69
FOXN3-217ENST00000557572 KCNQ2O43526 872 aa4.47□□□□□ -1.69
FOXN3-217ENST00000557572 SPATA31D3P0C874 917 aa4.47□□□□□ -1.69
FOXN3-217ENST00000557572 ATP2B1P20020 1258 aa4.47□□□□□ -1.69
FOXN3-217ENST00000557572 MXRA7P84157 204 aa4.47□□□□□ -1.69
FOXN3-217ENST00000557572 ROM1Q03395 351 aa4.47□□□□□ -1.69
FOXN3-217ENST00000557572 MTX3Q5HYI7 312 aa4.47□□□□□ -1.69
FOXN3-217ENST00000557572 SPATA31D4Q6ZUB0 917 aa4.47□□□□□ -1.69
FOXN3-217ENST00000557572 XYLT1Q86Y38 959 aa4.47□□□□□ -1.69
FOXN3-217ENST00000557572 PMFBP1Q8TBY8 1022 aa4.47□□□□□ -1.69
FOXN3-217ENST00000557572 MAML3Q96JK9 1138 aa4.47□□□□□ -1.69
FOXN3-217ENST00000557572 OSBPL6Q9BZF3 934 aa4.47□□□□□ -1.69
FOXN3-217ENST00000557572 CCDC113Q9H0I3 377 aa4.47□□□□□ -1.69
FOXN3-217ENST00000557572 WWOXQ9NZC7 414 aa4.47□□□□□ -1.69
FOXN3-217ENST00000557572 FOXJ2Q9P0K8 574 aa4.47□□□□□ -1.69
FOXN3-217ENST00000557572 CHPF2Q9P2E5 772 aa4.47□□□□□ -1.69
FOXN3-217ENST00000557572 PCDHA9Q9Y5H5 950 aa4.47□□□□□ -1.69
FOXN3-217ENST00000557572 ZNF804BA4D1E1 1349 aa4.46□□□□□ -1.69
FOXN3-217ENST00000557572 MANSC4A6NHS7 340 aaPredicted RBP4.46□□□□□ -1.7
FOXN3-217ENST00000557572 PDPK1O15530 556 aa4.46□□□□□ -1.7
FOXN3-217ENST00000557572 ZBTB48P10074 688 aaPredicted RBP4.46□□□□□ -1.7
FOXN3-217ENST00000557572 SLC6A3Q01959 620 aa4.46□□□□□ -1.7
FOXN3-217ENST00000557572 RBL2Q08999 1139 aa4.46□□□□□ -1.7
FOXN3-217ENST00000557572 FSTL4Q6MZW2 842 aa4.46□□□□□ -1.7
FOXN3-217ENST00000557572 CISD2Q8N5K1 135 aaKnown RBP4.46□□□□□ -1.7
FOXN3-217ENST00000557572 SMRP1Q8NCR6 262 aa4.46□□□□□ -1.7
FOXN3-217ENST00000557572 ADAMTS15Q8TE58 950 aa4.46□□□□□ -1.7
FOXN3-217ENST00000557572 DPF1Q92782 380 aa4.46□□□□□ -1.7
FOXN3-217ENST00000557572 UIMC1Q96RL1 719 aa4.46□□□□□ -1.7
FOXN3-217ENST00000557572 DHRS4Q9BTZ2 278 aa4.46□□□□□ -1.7
FOXN3-217ENST00000557572 ENKD1Q9H0I2 346 aa4.46□□□□□ -1.7
FOXN3-217ENST00000557572 ZSWIM4Q9H7M6 989 aa4.46□□□□□ -1.7
FOXN3-217ENST00000557572 ING3Q9NXR8 418 aa4.46□□□□□ -1.7
FOXN3-217ENST00000557572 CCDC194A0A1B0GVG4 234 aa4.45□□□□□ -1.7
FOXN3-217ENST00000557572 PRR5-ARHGAP8B1AHC4 643 aa4.45□□□□□ -1.7
FOXN3-217ENST00000557572 FOSP01100 380 aaPredicted RBP4.45□□□□□ -1.7
FOXN3-217ENST00000557572 CENPBP07199 599 aaPredicted RBP4.45□□□□□ -1.7
FOXN3-217ENST00000557572 BCAR1P56945 870 aa4.45□□□□□ -1.7
FOXN3-217ENST00000557572 MRPS35P82673 323 aaKnown RBP4.45□□□□□ -1.7
FOXN3-217ENST00000557572 ARHGAP44Q17R89 818 aa4.45□□□□□ -1.7
FOXN3-217ENST00000557572 HSP90AB4PQ58FF6 505 aa4.45□□□□□ -1.7
FOXN3-217ENST00000557572 FAM209AQ5JX71 171 aa4.45□□□□□ -1.7
FOXN3-217ENST00000557572 FOXB2Q5VYV0 432 aa4.45□□□□□ -1.7
FOXN3-217ENST00000557572 SPATC1Q76KD6 591 aa4.45□□□□□ -1.7
FOXN3-217ENST00000557572 TECPR1Q7Z6L1 1165 aa4.45□□□□□ -1.7
FOXN3-217ENST00000557572 NME9Q86XW9 330 aa4.45□□□□□ -1.7
FOXN3-217ENST00000557572 MORC4Q8TE76 937 aa4.45□□□□□ -1.7
FOXN3-217ENST00000557572 PMM1Q92871 262 aa4.45□□□□□ -1.7
FOXN3-217ENST00000557572 CCDC136Q96JN2 1154 aa4.45□□□□□ -1.7
FOXN3-217ENST00000557572 EXOC2Q96KP1 924 aa4.45□□□□□ -1.7
FOXN3-217ENST00000557572 BOCQ9BWV1 1114 aa4.45□□□□□ -1.7
FOXN3-217ENST00000557572 MTMR4Q9NYA4 1195 aa4.45□□□□□ -1.7
FOXN3-217ENST00000557572 NOP58Q9Y2X3 529 aaKnown RBP4.45□□□□□ -1.7
FOXN3-217ENST00000557572 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.44□□□□□ -1.7
FOXN3-217ENST00000557572 SERINC4A6NH21 518 aa4.44□□□□□ -1.7
FOXN3-217ENST00000557572 NRP1O14786 923 aa4.44□□□□□ -1.7
FOXN3-217ENST00000557572 MAFGO15525 162 aa4.44□□□□□ -1.7
FOXN3-217ENST00000557572 CDKL5O76039 1030 aa4.44□□□□□ -1.7
FOXN3-217ENST00000557572 CASRP41180 1078 aa4.44□□□□□ -1.7
FOXN3-217ENST00000557572 IRF9Q00978 393 aa4.44□□□□□ -1.7
FOXN3-217ENST00000557572 EIF2B5Q13144 721 aaKnown RBP4.44□□□□□ -1.7
FOXN3-217ENST00000557572 BMS1Q14692 1282 aaKnown RBP4.44□□□□□ -1.7
FOXN3-217ENST00000557572 ATG9BQ674R7 924 aa4.44□□□□□ -1.7
FOXN3-217ENST00000557572 DOK3Q7L591 496 aa4.44□□□□□ -1.7
FOXN3-217ENST00000557572 GPR149Q86SP6 731 aa4.44□□□□□ -1.7
FOXN3-217ENST00000557572 ACTRT2Q8TDY3 377 aa4.44□□□□□ -1.7
FOXN3-217ENST00000557572 PDLIM2Q96JY6 352 aa4.44□□□□□ -1.7
FOXN3-217ENST00000557572 BRINP2Q9C0B6 783 aa4.44□□□□□ -1.7
FOXN3-217ENST00000557572 PITHD1Q9GZP4 211 aaPredicted RBP4.44□□□□□ -1.7
FOXN3-217ENST00000557572 GABBR1Q9UBS5 961 aa4.44□□□□□ -1.7
FOXN3-217ENST00000557572 MRPS23Q9Y3D9 190 aaKnown RBP4.44□□□□□ -1.7
FOXN3-217ENST00000557572 FPGT-TNNI3KV9GXZ4 949 aa4.44□□□□□ -1.7
FOXN3-217ENST00000557572 CCDC187A0A096LP49 1063 aa4.43□□□□□ -1.7
FOXN3-217ENST00000557572 CCDC163A0A0D9SF12 145 aa4.43□□□□□ -1.7
FOXN3-217ENST00000557572 SNHG28P0DPA3 235 aa4.43□□□□□ -1.7
FOXN3-217ENST00000557572 WNT3AP56704 352 aa4.43□□□□□ -1.7
FOXN3-217ENST00000557572 ANAPC15P60006 121 aa4.43□□□□□ -1.7
FOXN3-217ENST00000557572 EXOSC10Q01780 885 aaKnown RBP4.43□□□□□ -1.7
FOXN3-217ENST00000557572 SCAPQ12770 1279 aa4.43□□□□□ -1.7
FOXN3-217ENST00000557572 RAPGEF1Q13905 1077 aa4.43□□□□□ -1.7
FOXN3-217ENST00000557572 ETFDHQ16134 617 aa4.43□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms