RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 GTF2BQ00403 316 aa19.06■□□□□ 0.64
XRCC3-218ENST00000557439 BIRC3Q13489 604 aa19.06■□□□□ 0.64
XRCC3-218ENST00000557439 TUBB8Q3ZCM7 444 aa19.06■□□□□ 0.64
XRCC3-218ENST00000557439 FAM71AQ8IYT1 594 aa19.06■□□□□ 0.64
XRCC3-218ENST00000557439 ARFGAP2Q8N6H7 521 aa19.06■□□□□ 0.64
XRCC3-218ENST00000557439 ZNF564Q8TBZ8 553 aaPredicted RBP19.06■□□□□ 0.64
XRCC3-218ENST00000557439 TNIP1Q15025 636 aa19.05■□□□□ 0.64
XRCC3-218ENST00000557439 UBL4BQ8N7F7 174 aa19.05■□□□□ 0.64
XRCC3-218ENST00000557439 PSMD1Q99460 953 aa19.05■□□□□ 0.64
XRCC3-218ENST00000557439 DDX20Q9UHI6 824 aaKnown RBP19.05■□□□□ 0.64
XRCC3-218ENST00000557439 TRAPPC3O43617 180 aa19.05■□□□□ 0.64
XRCC3-218ENST00000557439 ATP2C2O75185 946 aa19.05■□□□□ 0.64
XRCC3-218ENST00000557439 PGM5Q15124 567 aa19.05■□□□□ 0.64
XRCC3-218ENST00000557439 AGBL2Q5U5Z8 902 aa19.05■□□□□ 0.64
XRCC3-218ENST00000557439 CCDC25Q86WR0 208 aa19.05■□□□□ 0.64
XRCC3-218ENST00000557439 DBR1Q9UK59 544 aaKnown RBP19.05■□□□□ 0.64
XRCC3-218ENST00000557439 SYNGAP1Q96PV0 1343 aa19.04■□□□□ 0.64
XRCC3-218ENST00000557439 DENND3A2RUS2 1198 aa19.04■□□□□ 0.64
XRCC3-218ENST00000557439 RARAP10276 462 aa19.04■□□□□ 0.64
XRCC3-218ENST00000557439 CYP11B1P15538 503 aa19.04■□□□□ 0.64
XRCC3-218ENST00000557439 CNGA1P29973 690 aa19.04■□□□□ 0.64
XRCC3-218ENST00000557439 NPTX2P47972 431 aa19.04■□□□□ 0.64
XRCC3-218ENST00000557439 SNX1Q13596 522 aa19.04■□□□□ 0.64
XRCC3-218ENST00000557439 C11orf63Q6NUN7 778 aa19.04■□□□□ 0.64
XRCC3-218ENST00000557439 SLC39A4Q6P5W5 647 aa19.04■□□□□ 0.64
XRCC3-218ENST00000557439 KCNV1Q6PIU1 500 aa19.04■□□□□ 0.64
XRCC3-218ENST00000557439 ANO5Q75V66 913 aa19.04■□□□□ 0.64
XRCC3-218ENST00000557439 PRPF38AQ8NAV1 312 aaKnown RBP19.04■□□□□ 0.64
XRCC3-218ENST00000557439 NEK9Q8TD19 979 aa19.04■□□□□ 0.64
XRCC3-218ENST00000557439 EPS8L3Q8TE67 593 aaKnown RBP19.04■□□□□ 0.64
XRCC3-218ENST00000557439 C1orf54Q8WWF1 131 aa19.04■□□□□ 0.64
XRCC3-218ENST00000557439 NAP1L3Q99457 506 aaPredicted RBP19.04■□□□□ 0.64
XRCC3-218ENST00000557439 SELENOSQ9BQE4 189 aa19.04■□□□□ 0.64
XRCC3-218ENST00000557439 AZI2Q9H6S1 392 aa19.04■□□□□ 0.64
XRCC3-218ENST00000557439 SF3B2Q13435 895 aaKnown RBP19.04■□□□□ 0.64
XRCC3-218ENST00000557439 CCDC38Q502W7 563 aa19.04■□□□□ 0.64
XRCC3-218ENST00000557439 CCDC105Q8IYK2 499 aa19.04■□□□□ 0.64
XRCC3-218ENST00000557439 HELQQ8TDG4 1101 aa19.04■□□□□ 0.64
XRCC3-218ENST00000557439 DNAJC17Q9NVM6 304 aaKnown RBP19.04■□□□□ 0.64
XRCC3-218ENST00000557439 TBX20Q9UMR3 447 aa19.04■□□□□ 0.64
XRCC3-218ENST00000557439 FZD1Q9UP38 647 aa19.04■□□□□ 0.64
XRCC3-218ENST00000557439 DIS3Q9Y2L1 958 aaKnown RBP19.04■□□□□ 0.64
XRCC3-218ENST00000557439 RIPK3Q9Y572 518 aa19.04■□□□□ 0.64
XRCC3-218ENST00000557439 WNT10BO00744 389 aa19.03■□□□□ 0.64
XRCC3-218ENST00000557439 CLDN3O15551 220 aa19.03■□□□□ 0.64
XRCC3-218ENST00000557439 ASNSP08243 561 aa19.03■□□□□ 0.64
XRCC3-218ENST00000557439 SEL1L2Q5TEA6 688 aa19.03■□□□□ 0.64
XRCC3-218ENST00000557439 PCNX4Q63HM2 1172 aa19.03■□□□□ 0.64
XRCC3-218ENST00000557439 TMEM161BQ8NDZ6 487 aa19.03■□□□□ 0.64
XRCC3-218ENST00000557439 PARD3BQ8TEW8 1205 aa19.03■□□□□ 0.64
XRCC3-218ENST00000557439 CD101Q93033 1021 aa19.03■□□□□ 0.64
XRCC3-218ENST00000557439 RMDN3Q96TC7 470 aa19.03■□□□□ 0.64
XRCC3-218ENST00000557439 TCEAL9Q9UHQ7 104 aa19.03■□□□□ 0.64
XRCC3-218ENST00000557439 ADGRA3Q8IWK6 1321 aa19.03■□□□□ 0.64
XRCC3-218ENST00000557439 FOXO6A8MYZ6 492 aa19.03■□□□□ 0.64
XRCC3-218ENST00000557439 PLA2G6O60733 806 aa19.03■□□□□ 0.64
XRCC3-218ENST00000557439 KRT5P13647 590 aa19.03■□□□□ 0.64
XRCC3-218ENST00000557439 RFX1P22670 979 aa19.03■□□□□ 0.64
XRCC3-218ENST00000557439 FNTAP49354 379 aa19.03■□□□□ 0.64
XRCC3-218ENST00000557439 MYBPC2Q14324 1141 aa19.03■□□□□ 0.64
XRCC3-218ENST00000557439 SUPT20HQ8NEM7 779 aa19.03■□□□□ 0.64
XRCC3-218ENST00000557439 ATG4AQ8WYN0 398 aa19.03■□□□□ 0.64
XRCC3-218ENST00000557439 SHC3Q92529 594 aa19.03■□□□□ 0.64
XRCC3-218ENST00000557439 FAM118BQ9BPY3 351 aa19.03■□□□□ 0.64
XRCC3-218ENST00000557439 PABPC3Q9H361 631 aaKnown RBP19.03■□□□□ 0.64
XRCC3-218ENST00000557439 PGAP2Q9UHJ9 254 aa19.03■□□□□ 0.64
XRCC3-218ENST00000557439 PCDHA3Q9Y5H8 950 aa19.03■□□□□ 0.64
XRCC3-218ENST00000557439 H0YHG0 523 aa19.02■□□□□ 0.64
XRCC3-218ENST00000557439 CTNNA2P26232 953 aa19.02■□□□□ 0.64
XRCC3-218ENST00000557439 NCKAP1LP55160 1127 aa19.02■□□□□ 0.64
XRCC3-218ENST00000557439 BYSLQ13895 437 aaKnown RBP19.02■□□□□ 0.64
XRCC3-218ENST00000557439 DHX34Q14147 1143 aaKnown RBP19.02■□□□□ 0.64
XRCC3-218ENST00000557439 TRIP13Q15645 432 aaPredicted RBP19.02■□□□□ 0.64
XRCC3-218ENST00000557439 DENND2CQ68D51 928 aa19.02■□□□□ 0.64
XRCC3-218ENST00000557439 HERPUD2Q9BSE4 406 aa19.02■□□□□ 0.64
XRCC3-218ENST00000557439 MTFR1LQ9H019 292 aa19.02■□□□□ 0.64
XRCC3-218ENST00000557439 PFASO15067 1338 aa19.02■□□□□ 0.64
XRCC3-218ENST00000557439 FAM187AA6NFU0 413 aa19.02■□□□□ 0.64
XRCC3-218ENST00000557439 MIF4GDA9UHW6 222 aaKnown RBP19.02■□□□□ 0.64
XRCC3-218ENST00000557439 HADHBP55084 474 aaKnown RBP19.02■□□□□ 0.64
XRCC3-218ENST00000557439 SIX1Q15475 284 aaPredicted RBP19.02■□□□□ 0.64
XRCC3-218ENST00000557439 SLC13A5Q86YT5 568 aaPredicted RBP19.02■□□□□ 0.64
XRCC3-218ENST00000557439 C12orf56Q8IXR9 622 aa19.02■□□□□ 0.64
XRCC3-218ENST00000557439 TLCD1Q96CP7 247 aa19.02■□□□□ 0.64
XRCC3-218ENST00000557439 CHN1P15882 459 aa19.01■□□□□ 0.63
XRCC3-218ENST00000557439 HNRNPH1P31943 449 aaKnown RBP19.01■□□□□ 0.63
XRCC3-218ENST00000557439 CHRNA3P32297 505 aa19.01■□□□□ 0.63
XRCC3-218ENST00000557439 KRT39Q6A163 491 aa19.01■□□□□ 0.63
XRCC3-218ENST00000557439 POMGNT1Q8WZA1 660 aa19.01■□□□□ 0.63
XRCC3-218ENST00000557439 RASAL2Q9UJF2 1139 aa19.01■□□□□ 0.63
XRCC3-218ENST00000557439 LOXHD1Q8IVV2 1947 aa19.01■□□□□ 0.63
XRCC3-218ENST00000557439 DOCK5Q9H7D0 1870 aa19.01■□□□□ 0.63
XRCC3-218ENST00000557439 O00370 1275 aa19.01■□□□□ 0.63
XRCC3-218ENST00000557439 ZNF862O60290 1169 aa19.01■□□□□ 0.63
XRCC3-218ENST00000557439 COILP38432 576 aaPredicted RBP19.01■□□□□ 0.63
XRCC3-218ENST00000557439 WNT7BP56706 349 aa19.01■□□□□ 0.63
XRCC3-218ENST00000557439 MTMR2Q13614 643 aa19.01■□□□□ 0.63
XRCC3-218ENST00000557439 C6orf89Q6UWU4 347 aa19.01■□□□□ 0.63
XRCC3-218ENST00000557439 SV2AQ7L0J3 742 aa19.01■□□□□ 0.63
XRCC3-218ENST00000557439 PDCD2LQ9BRP1 358 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms