RNA–Protein interactions for RNA: ENST00000557349.5

TVP23C-CDRT4-204, Transcript of TVP23C-CDRT4 readthrough, humanhuman

TSL 2

Gene TVP23C-CDRT4, Length 1,005 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23C-CDRT4-204ENST00000557349 SFR1Q86XK3 245 aa18.36■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 ZFP42Q96MM3 310 aa18.36■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 ACO2Q99798 780 aaKnown RBP18.36■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 TCHPQ9BT92 498 aa18.36■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 LRRC27Q9C0I9 530 aa18.36■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 TNMDQ9H2S6 317 aa18.36■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 ANKFY1Q9P2R3 1169 aa18.36■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 PRRC2BQ5JSZ5 2229 aaKnown RBP18.35■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 ZMYM2Q9UBW7 1377 aa18.35■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 CARNS1A5YM72 827 aa18.35■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 POLR2DO15514 142 aaKnown RBP18.35■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 HARSP12081 509 aaKnown RBP18.35■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 SCP2P22307 547 aa18.35■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 MATR3P43243 847 aaKnown RBP eCLIP18.35■□□□□ 0.536e-7■■□□□ 14.4
TVP23C-CDRT4-204ENST00000557349 AFF1P51825 1210 aaKnown RBP18.35■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 BCAR1P56945 870 aa18.35■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 ZBTB33Q86T24 672 aa18.35■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 SLC17A8Q8NDX2 589 aa18.35■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 POF1BQ8WVV4 589 aa18.35■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 STAMQ92783 540 aa18.35■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 PYM1Q9BRP8 204 aaKnown RBP18.35■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 CDT1Q9H211 546 aa18.35■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 NRDE2Q9H7Z3 1164 aa18.35■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 SNTG2Q9NY99 539 aa18.35■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 SPG21Q9NZD8 308 aa18.35■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 KLK14Q9P0G3 267 aa18.35■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 GDAQ9Y2T3 454 aa18.35■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 HNRNPDLO14979 420 aaKnown RBP18.34■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 RECQL4O94761 1208 aa18.34■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 GAP43P17677 238 aa18.34■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 ABCD1P33897 745 aa18.34■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 AMPD3Q01432 767 aa18.34■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 KRT17Q04695 432 aa18.34■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 UBE3AQ05086 875 aa18.34■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 TPRNQ4KMQ1 711 aa18.34■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 MPZL3Q6UWV2 235 aa18.34■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 SLC39A11Q8N1S5 342 aa18.34■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 SPPL3Q8TCT6 385 aa18.34■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 TMEM169Q96HH4 297 aa18.34■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 NSUN3Q9H649 340 aaKnown RBP18.34■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 MAGEF1Q9HAY2 307 aa18.34■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 SEL1LQ9UBV2 794 aa18.34■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 DNAJB4Q9UDY4 337 aa18.34■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 KCNH3Q9ULD8 1083 aa18.34■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 COL6A3P12111 3177 aa18.34■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 PLXNA4Q9HCM2 1894 aa18.33■□□□□ 0.53
TVP23C-CDRT4-204ENST00000557349 NT5C1B-RDH14C9J2C7 533 aa18.33■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 INPPL1O15357 1258 aa18.33■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 TOM1L1O75674 476 aa18.33■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 NMT1P30419 496 aaKnown RBP18.33■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 LIG4P49917 911 aa18.33■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 GRIK3Q13003 919 aa18.33■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 NOLC1Q14978 699 aaKnown RBP eCLIP18.33■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 ADALQ6DHV7 355 aa18.33■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 ZPBP2Q6X784 338 aa18.33■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 ZNF280BQ86YH2 543 aa18.33■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 MICAL1Q8TDZ2 1067 aa18.33■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 DNAJC19Q96DA6 116 aa18.33■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 CCDC94Q9BW85 323 aaPredicted RBP18.33■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 MRPL44Q9H9J2 332 aaKnown RBP18.33■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 GDPD2Q9HCC8 539 aa18.33■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 TLR9Q9NR96 1032 aa18.33■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 PUF60Q9UHX1 559 aaKnown RBP18.33■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 TBX20Q9UMR3 447 aa18.33■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 DDHD2O94830 711 aa18.32■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 MCF2P10911 925 aa18.32■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 PFKFB1P16118 471 aa18.32■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 DNAJB1P25685 340 aa18.32■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 SLC11A1P49279 550 aa18.32■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 YARSP54577 528 aaKnown RBP18.32■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 OSTNP61366 133 aa18.32■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 ASIC1P78348 528 aa18.32■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 PLCB3Q01970 1234 aa18.32■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 HERC4Q5GLZ8 1057 aaPredicted RBP18.32■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 CCDC65Q8IXS2 484 aa18.32■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 CEP57L1Q8IYX8 460 aa18.32■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 CEP120Q8N960 986 aa18.32■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 MRPS27Q92552 414 aaKnown RBP18.32■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 PPP2R3CQ969Q6 453 aa18.32■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 FIZ1Q96SL8 496 aa18.32■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 TMEM175Q9BSA9 504 aa18.32■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 TRIM9Q9C026 710 aa18.32■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 PTPRHQ9HD43 1115 aa18.32■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 ENTPD7Q9NQZ7 604 aa18.32■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 TOPORSQ9NS56 1045 aaPredicted RBP18.32■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 PANK4Q9NVE7 773 aa18.32■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 KBTBD4Q9NVX7 518 aa18.32■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 TBC1D7Q9P0N9 293 aa18.32■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.31■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 A0A1B0GVL5 298 aa18.31■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 CLDN3O15551 220 aa18.31■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 B4GALT3O60512 393 aa18.31■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 NR1I2O75469 434 aa18.31■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 GCNT3O95395 438 aa18.31■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 GALTP07902 379 aa18.31■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 PROZP22891 400 aa18.31■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 CMA1P23946 247 aa18.31■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 GRM5P41594 1212 aa18.31■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 OR1G1P47890 313 aa18.31■□□□□ 0.52
TVP23C-CDRT4-204ENST00000557349 GTF2BQ00403 316 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 84 ms