RNA–Protein interactions for RNA: ENST00000557329.1

CHD8-212, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 578 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-212ENST00000557329 CREB3L3Q68CJ9 461 aa5.19□□□□□ -1.58
CHD8-212ENST00000557329 FSTL4Q6MZW2 842 aa5.19□□□□□ -1.58
CHD8-212ENST00000557329 TOM1L2Q6ZVM7 507 aa5.19□□□□□ -1.58
CHD8-212ENST00000557329 KRT26Q7Z3Y9 468 aa5.19□□□□□ -1.58
CHD8-212ENST00000557329 RASSF3Q86WH2 238 aa5.19□□□□□ -1.58
CHD8-212ENST00000557329 C16orf71Q8IYS4 520 aaPredicted RBP5.19□□□□□ -1.58
CHD8-212ENST00000557329 LEO1Q8WVC0 666 aaPredicted RBP5.19□□□□□ -1.58
CHD8-212ENST00000557329 GCDHQ92947 438 aaPredicted RBP5.19□□□□□ -1.58
CHD8-212ENST00000557329 DVL3Q92997 716 aaPredicted RBP5.19□□□□□ -1.58
CHD8-212ENST00000557329 FERMT2Q96AC1 680 aa5.19□□□□□ -1.58
CHD8-212ENST00000557329 DYDC2Q96IM9 177 aa5.19□□□□□ -1.58
CHD8-212ENST00000557329 WDR92Q96MX6 357 aa5.19□□□□□ -1.58
CHD8-212ENST00000557329 SSBP3Q9BWW4 388 aaPredicted RBP5.19□□□□□ -1.58
CHD8-212ENST00000557329 HAPLN2Q9GZV7 340 aa5.19□□□□□ -1.58
CHD8-212ENST00000557329 OAZ3Q9UMX2 235 aa5.19□□□□□ -1.58
CHD8-212ENST00000557329 ATP10DQ9P241 1426 aa5.19□□□□□ -1.58
CHD8-212ENST00000557329 SBNO1A3KN83 1393 aa5.18□□□□□ -1.58
CHD8-212ENST00000557329 A0A0A6YYJ9 748 aa5.18□□□□□ -1.58
CHD8-212ENST00000557329 LOC105371045A0A1W2PR82 267 aa5.18□□□□□ -1.58
CHD8-212ENST00000557329 PATE3B3GLJ2 98 aa5.18□□□□□ -1.58
CHD8-212ENST00000557329 ZNF888P0CJ79 500 aaPredicted RBP5.18□□□□□ -1.58
CHD8-212ENST00000557329 BPIP17213 487 aa5.18□□□□□ -1.58
CHD8-212ENST00000557329 PTX3P26022 381 aaPredicted RBP5.18□□□□□ -1.58
CHD8-212ENST00000557329 RGS3P49796 1198 aa5.18□□□□□ -1.58
CHD8-212ENST00000557329 SELENOPP49908 381 aa5.18□□□□□ -1.58
CHD8-212ENST00000557329 NRG3P56975 720 aa5.18□□□□□ -1.58
CHD8-212ENST00000557329 HHEXQ03014 270 aa5.18□□□□□ -1.58
CHD8-212ENST00000557329 ATP13A4Q4VNC1 1196 aa5.18□□□□□ -1.58
CHD8-212ENST00000557329 GPR155Q7Z3F1 870 aa5.18□□□□□ -1.58
CHD8-212ENST00000557329 POLNQ7Z5Q5 900 aa5.18□□□□□ -1.58
CHD8-212ENST00000557329 FILIP1Q7Z7B0 1213 aa5.18□□□□□ -1.58
CHD8-212ENST00000557329 ADGRE4PQ86SQ3 457 aa5.18□□□□□ -1.58
CHD8-212ENST00000557329 THNSL2Q86YJ6 484 aa5.18□□□□□ -1.58
CHD8-212ENST00000557329 NXPE1Q8N323 547 aa5.18□□□□□ -1.58
CHD8-212ENST00000557329 CDYL2Q8N8U2 506 aa5.18□□□□□ -1.58
CHD8-212ENST00000557329 DNERQ8NFT8 737 aa5.18□□□□□ -1.58
CHD8-212ENST00000557329 RABGGTAQ92696 567 aa5.18□□□□□ -1.58
CHD8-212ENST00000557329 FAM89AQ96GI7 184 aa5.18□□□□□ -1.58
CHD8-212ENST00000557329 GPR101Q96P66 508 aaPredicted RBP5.18□□□□□ -1.58
CHD8-212ENST00000557329 PRAM1Q96QH2 718 aa5.18□□□□□ -1.58
CHD8-212ENST00000557329 MPHOSPH9Q99550 1183 aa5.18□□□□□ -1.58
CHD8-212ENST00000557329 GPR20Q99678 358 aa5.18□□□□□ -1.58
CHD8-212ENST00000557329 KRTAP9-8Q9BYQ0 159 aa5.18□□□□□ -1.58
CHD8-212ENST00000557329 MEGF9Q9H1U4 602 aa5.18□□□□□ -1.58
CHD8-212ENST00000557329 DEF6Q9H4E7 631 aa5.18□□□□□ -1.58
CHD8-212ENST00000557329 ZMAT4Q9H898 229 aa5.18□□□□□ -1.58
CHD8-212ENST00000557329 TFCP2L1Q9NZI6 479 aa5.18□□□□□ -1.58
CHD8-212ENST00000557329 CDC42EP3Q9UKI2 254 aa5.18□□□□□ -1.58
CHD8-212ENST00000557329 FAM184BQ9ULE4 1060 aa5.18□□□□□ -1.58
CHD8-212ENST00000557329 SLC30A1Q9Y6M5 507 aa5.18□□□□□ -1.58
CHD8-212ENST00000557329 GOLGB1Q14789 3259 aaKnown RBP5.18□□□□□ -1.58
CHD8-212ENST00000557329 COL14A1Q05707 1796 aaKnown RBP5.17□□□□□ -1.58
CHD8-212ENST00000557329 ZNF891A8MT65 544 aaPredicted RBP5.17□□□□□ -1.58
CHD8-212ENST00000557329 C1QTNF3-AMACRE9PGA6 284 aa5.17□□□□□ -1.58
CHD8-212ENST00000557329 CYP27B1O15528 508 aa5.17□□□□□ -1.58
CHD8-212ENST00000557329 SLC26A4O43511 780 aa5.17□□□□□ -1.58
CHD8-212ENST00000557329 CDC14BO60729 498 aa5.17□□□□□ -1.58
CHD8-212ENST00000557329 RAD17O75943 681 aa5.17□□□□□ -1.58
CHD8-212ENST00000557329 JUNP05412 331 aaKnown RBP5.17□□□□□ -1.58
CHD8-212ENST00000557329 VIL1P09327 827 aaKnown RBP5.17□□□□□ -1.58
CHD8-212ENST00000557329 MASP1P48740 699 aa5.17□□□□□ -1.58
CHD8-212ENST00000557329 RRADP55042 308 aa5.17□□□□□ -1.58
CHD8-212ENST00000557329 TERF2Q15554 542 aa5.17□□□□□ -1.58
CHD8-212ENST00000557329 RNF187Q5TA31 235 aaPredicted RBP5.17□□□□□ -1.58
CHD8-212ENST00000557329 ESRP1Q6NXG1 681 aaKnown RBP5.17□□□□□ -1.58
CHD8-212ENST00000557329 RNF180Q86T96 592 aa5.17□□□□□ -1.58
CHD8-212ENST00000557329 TAX1BP1Q86VP1 789 aa5.17□□□□□ -1.58
CHD8-212ENST00000557329 SLC5A5Q92911 643 aa5.17□□□□□ -1.58
CHD8-212ENST00000557329 ACAP3Q96P50 834 aa5.17□□□□□ -1.58
CHD8-212ENST00000557329 C12orf65Q9H3J6 166 aaKnown RBP5.17□□□□□ -1.58
CHD8-212ENST00000557329 C14orf93Q9H972 538 aaKnown RBP5.17□□□□□ -1.58
CHD8-212ENST00000557329 EMC7Q9NPA0 242 aa5.17□□□□□ -1.58
CHD8-212ENST00000557329 AURKAIP1Q9NWT8 199 aaPredicted RBP5.17□□□□□ -1.58
CHD8-212ENST00000557329 MSRAQ9UJ68 235 aa5.17□□□□□ -1.58
CHD8-212ENST00000557329 MYRFQ9Y2G1 1151 aa5.17□□□□□ -1.58
CHD8-212ENST00000557329 NOC2LQ9Y3T9 749 aaKnown RBP5.17□□□□□ -1.58
CHD8-212ENST00000557329 TESMINQ9Y4I5 508 aa5.17□□□□□ -1.58
CHD8-212ENST00000557329 CTDP1Q9Y5B0 961 aaPredicted RBP5.17□□□□□ -1.58
CHD8-212ENST00000557329 NUMBLQ9Y6R0 609 aa5.17□□□□□ -1.58
CHD8-212ENST00000557329 RREB1Q92766 1687 aa5.17□□□□□ -1.58
CHD8-212ENST00000557329 RGPD8O14715 1765 aaPredicted RBP5.16□□□□□ -1.58
CHD8-212ENST00000557329 EXOC5O00471 708 aa5.16□□□□□ -1.58
CHD8-212ENST00000557329 NRP1O14786 923 aa5.16□□□□□ -1.58
CHD8-212ENST00000557329 MTSS1O43312 755 aa5.16□□□□□ -1.58
CHD8-212ENST00000557329 OPHN1O60890 802 aa5.16□□□□□ -1.58
CHD8-212ENST00000557329 ZNF623O75123 536 aa5.16□□□□□ -1.58
CHD8-212ENST00000557329 ADCYAP1R1P41586 468 aa5.16□□□□□ -1.58
CHD8-212ENST00000557329 MYBPC3Q14896 1274 aa5.16□□□□□ -1.58
CHD8-212ENST00000557329 NOLC1Q14978 699 aaKnown RBP eCLIP5.16□□□□□ -1.58
CHD8-212ENST00000557329 SEPT7Q16181 437 aaKnown RBP5.16□□□□□ -1.58
CHD8-212ENST00000557329 RNF151Q2KHN1 245 aa5.16□□□□□ -1.58
CHD8-212ENST00000557329 EGFLAMQ63HQ2 1017 aa5.16□□□□□ -1.58
CHD8-212ENST00000557329 RTF1Q92541 710 aaKnown RBP5.16□□□□□ -1.58
CHD8-212ENST00000557329 EDAQ92838 391 aa5.16□□□□□ -1.58
CHD8-212ENST00000557329 LRRC37BQ96QE4 947 aa5.16□□□□□ -1.58
CHD8-212ENST00000557329 NOL10Q9BSC4 688 aaKnown RBP5.16□□□□□ -1.58
CHD8-212ENST00000557329 MYL10Q9BUA6 226 aa5.16□□□□□ -1.58
CHD8-212ENST00000557329 MTG2Q9H4K7 406 aa5.16□□□□□ -1.58
CHD8-212ENST00000557329 ZFR2Q9UPR6 939 aaKnown RBP5.16□□□□□ -1.58
CHD8-212ENST00000557329 THRAP3Q9Y2W1 955 aaKnown RBP5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms