RNA–Protein interactions for RNA: ENST00000556831.5

SLIRP-207, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 729 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-207ENST00000556831 OFD1O75665 1012 aa15.49■□□□□ 0.07
SLIRP-207ENST00000556831 SCP2P22307 547 aa15.49■□□□□ 0.07
SLIRP-207ENST00000556831 ABCD1P33897 745 aa15.49■□□□□ 0.07
SLIRP-207ENST00000556831 CA8P35219 290 aa15.49■□□□□ 0.07
SLIRP-207ENST00000556831 GTF2F1P35269 517 aaKnown RBP eCLIP15.49■□□□□ 0.07
SLIRP-207ENST00000556831 IRS1P35568 1242 aa15.49■□□□□ 0.07
SLIRP-207ENST00000556831 DDIT3P35638 169 aa15.49■□□□□ 0.07
SLIRP-207ENST00000556831 MLH1P40692 756 aa15.49■□□□□ 0.07
SLIRP-207ENST00000556831 KCNQ1P51787 676 aa15.49■□□□□ 0.07
SLIRP-207ENST00000556831 CACNB1Q02641 598 aaPredicted RBP15.49■□□□□ 0.07
SLIRP-207ENST00000556831 AGMOQ6ZNB7 445 aa15.49■□□□□ 0.07
SLIRP-207ENST00000556831 SV2BQ7L1I2 683 aa15.49■□□□□ 0.07
SLIRP-207ENST00000556831 DAW1Q8N136 415 aa15.49■□□□□ 0.07
SLIRP-207ENST00000556831 MYCT1Q8N699 235 aa15.49■□□□□ 0.07
SLIRP-207ENST00000556831 SPIRE2Q8WWL2 714 aa15.49■□□□□ 0.07
SLIRP-207ENST00000556831 HLA-CQ95604 372 aa15.49■□□□□ 0.07
SLIRP-207ENST00000556831 BICD1Q96G01 975 aa15.49■□□□□ 0.07
SLIRP-207ENST00000556831 REEP2Q9BRK0 252 aa15.49■□□□□ 0.07
SLIRP-207ENST00000556831 TCHPQ9BT92 498 aa15.49■□□□□ 0.07
SLIRP-207ENST00000556831 NXF3Q9H4D5 531 aaKnown RBP15.49■□□□□ 0.07
SLIRP-207ENST00000556831 PDZD7Q9H5P4 517 aa15.49■□□□□ 0.07
SLIRP-207ENST00000556831 TMEM134Q9H6X4 195 aa15.49■□□□□ 0.07
SLIRP-207ENST00000556831 PARVGQ9HBI0 331 aa15.49■□□□□ 0.07
SLIRP-207ENST00000556831 ENTPD7Q9NQZ7 604 aa15.49■□□□□ 0.07
SLIRP-207ENST00000556831 TLR9Q9NR96 1032 aa15.49■□□□□ 0.07
SLIRP-207ENST00000556831 TBC1D13Q9NVG8 400 aa15.49■□□□□ 0.07
SLIRP-207ENST00000556831 GIT1Q9Y2X7 761 aa15.49■□□□□ 0.07
SLIRP-207ENST00000556831 ZDBF2Q9HCK1 2354 aa15.49■□□□□ 0.07
SLIRP-207ENST00000556831 TCF20Q9UGU0 1960 aaKnown RBP15.49■□□□□ 0.07
SLIRP-207ENST00000556831 K7ENM7 598 aa15.48■□□□□ 0.07
SLIRP-207ENST00000556831 NCK2O43639 380 aa15.48■□□□□ 0.07
SLIRP-207ENST00000556831 POMCP01189 267 aa15.48■□□□□ 0.07
SLIRP-207ENST00000556831 MATR3P43243 847 aaKnown RBP eCLIP15.48■□□□□ 0.07
SLIRP-207ENST00000556831 BCAR1P56945 870 aa15.48■□□□□ 0.07
SLIRP-207ENST00000556831 KRT85P78386 507 aa15.48■□□□□ 0.07
SLIRP-207ENST00000556831 NHLH1Q02575 133 aa15.48■□□□□ 0.07
SLIRP-207ENST00000556831 MAPK7Q13164 816 aa15.48■□□□□ 0.07
SLIRP-207ENST00000556831 ZNF568Q3ZCX4 644 aa15.48■□□□□ 0.07
SLIRP-207ENST00000556831 TCEAL5Q5H9L2 206 aa15.48■□□□□ 0.07
SLIRP-207ENST00000556831 PDE12Q6L8Q7 609 aaKnown RBP15.48■□□□□ 0.07
SLIRP-207ENST00000556831 TMEM87AQ8NBN3 555 aa15.48■□□□□ 0.07
SLIRP-207ENST00000556831 SMG8Q8ND04 991 aaKnown RBP15.48■□□□□ 0.07
SLIRP-207ENST00000556831 MRPS27Q92552 414 aaKnown RBP15.48■□□□□ 0.07
SLIRP-207ENST00000556831 LRRC27Q9C0I9 530 aa15.48■□□□□ 0.07
SLIRP-207ENST00000556831 BLOC1S4Q9NUP1 217 aa15.48■□□□□ 0.07
SLIRP-207ENST00000556831 FAM13BQ9NYF5 915 aa15.48■□□□□ 0.07
SLIRP-207ENST00000556831 ARHGAP28Q9P2N2 729 aa15.48■□□□□ 0.07
SLIRP-207ENST00000556831 STK39Q9UEW8 545 aa15.48■□□□□ 0.07
SLIRP-207ENST00000556831 LZTS1Q9Y250 596 aa15.48■□□□□ 0.07
SLIRP-207ENST00000556831 HES2Q9Y543 173 aa15.48■□□□□ 0.07
SLIRP-207ENST00000556831 ZMYM2Q9UBW7 1377 aa15.48■□□□□ 0.07
SLIRP-207ENST00000556831 NPHP3-ACAD11A0A0J9YXS1 232 aa15.47■□□□□ 0.07
SLIRP-207ENST00000556831 FSD2A1L4K1 749 aa15.47■□□□□ 0.07
SLIRP-207ENST00000556831 ARL5CA6NH57 179 aa15.47■□□□□ 0.07
SLIRP-207ENST00000556831 AKAP5P24588 427 aa15.47■□□□□ 0.07
SLIRP-207ENST00000556831 YARSP54577 528 aaKnown RBP15.47■□□□□ 0.07
SLIRP-207ENST00000556831 DNM1Q05193 864 aaKnown RBP15.47■□□□□ 0.07
SLIRP-207ENST00000556831 PKP1Q13835 747 aa15.47■□□□□ 0.07
SLIRP-207ENST00000556831 USP49Q70CQ1 688 aa15.47■□□□□ 0.07
SLIRP-207ENST00000556831 ADGRD2Q7Z7M1 963 aa15.47■□□□□ 0.07
SLIRP-207ENST00000556831 FAM178BQ8IXR5 827 aa15.47■□□□□ 0.07
SLIRP-207ENST00000556831 PDILTQ8N807 584 aa15.47■□□□□ 0.07
SLIRP-207ENST00000556831 SPPL3Q8TCT6 385 aa15.47■□□□□ 0.07
SLIRP-207ENST00000556831 GAD1Q99259 594 aa15.47■□□□□ 0.07
SLIRP-207ENST00000556831 RNF39Q9H2S5 420 aa15.47■□□□□ 0.07
SLIRP-207ENST00000556831 EPHX3Q9H6B9 360 aa15.47■□□□□ 0.07
SLIRP-207ENST00000556831 TOPORSQ9NS56 1045 aaPredicted RBP15.47■□□□□ 0.07
SLIRP-207ENST00000556831 OR1G1P47890 313 aa15.46■□□□□ 0.07
SLIRP-207ENST00000556831 SCNN1GP51170 649 aa15.46■□□□□ 0.07
SLIRP-207ENST00000556831 PLCB3Q01970 1234 aa15.46■□□□□ 0.07
SLIRP-207ENST00000556831 GRIK3Q13003 919 aa15.46■□□□□ 0.07
SLIRP-207ENST00000556831 ARSHQ5FYA8 562 aa15.46■□□□□ 0.07
SLIRP-207ENST00000556831 TMC7Q7Z402 723 aa15.46■□□□□ 0.07
SLIRP-207ENST00000556831 TMEM173Q86WV6 379 aaPredicted RBP15.46■□□□□ 0.07
SLIRP-207ENST00000556831 SLC39A11Q8N1S5 342 aa15.46■□□□□ 0.07
SLIRP-207ENST00000556831 NECAB3Q96P71 396 aaPredicted RBP15.46■□□□□ 0.07
SLIRP-207ENST00000556831 TCF25Q9BQ70 676 aa15.46■□□□□ 0.07
SLIRP-207ENST00000556831 PYM1Q9BRP8 204 aaKnown RBP15.46■□□□□ 0.07
SLIRP-207ENST00000556831 TMEM175Q9BSA9 504 aa15.46■□□□□ 0.07
SLIRP-207ENST00000556831 NTPCRQ9BSD7 190 aaKnown RBP15.46■□□□□ 0.07
SLIRP-207ENST00000556831 CCDC94Q9BW85 323 aaPredicted RBP15.46■□□□□ 0.07
SLIRP-207ENST00000556831 PANK2Q9BZ23 570 aa15.46■□□□□ 0.07
SLIRP-207ENST00000556831 ANKFY1Q9P2R3 1169 aa15.46■□□□□ 0.07
SLIRP-207ENST00000556831 TNFSF13BQ9Y275 285 aa15.46■□□□□ 0.07
SLIRP-207ENST00000556831 NT5C1B-RDH14C9J2C7 533 aa15.45■□□□□ 0.06
SLIRP-207ENST00000556831 HNRNPDLO14979 420 aaKnown RBP15.45■□□□□ 0.06
SLIRP-207ENST00000556831 LINC01565O15544 149 aa15.45■□□□□ 0.06
SLIRP-207ENST00000556831 TRAK2O60296 914 aa15.45■□□□□ 0.06
SLIRP-207ENST00000556831 BRD1O95696 1058 aa15.45■□□□□ 0.06
SLIRP-207ENST00000556831 ALDH2P05091 517 aa15.45■□□□□ 0.06
SLIRP-207ENST00000556831 SRGAP2BP0DMP2 458 aa15.45■□□□□ 0.06
SLIRP-207ENST00000556831 HARSP12081 509 aaKnown RBP15.45■□□□□ 0.06
SLIRP-207ENST00000556831 LIG4P49917 911 aa15.45■□□□□ 0.06
SLIRP-207ENST00000556831 NCKAP1LP55160 1127 aa15.45■□□□□ 0.06
SLIRP-207ENST00000556831 RBM10P98175 930 aaKnown RBP15.45■□□□□ 0.06
SLIRP-207ENST00000556831 AMPD3Q01432 767 aa15.45■□□□□ 0.06
SLIRP-207ENST00000556831 GIT2Q14161 759 aa15.45■□□□□ 0.06
SLIRP-207ENST00000556831 NT5DC1Q5TFE4 455 aa15.45■□□□□ 0.06
SLIRP-207ENST00000556831 PLPP4Q5VZY2 271 aa15.45■□□□□ 0.06
SLIRP-207ENST00000556831 DYMQ7RTS9 669 aa15.45■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms