RNA–Protein interactions for RNA: ENST00000556798.1

SHMT2-225, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-225ENST00000556798 INPP5FQ9Y2H2 1132 aa19.18■□□□□ 0.66
SHMT2-225ENST00000556798 CDH23Q9H251 3354 aa19.18■□□□□ 0.66
SHMT2-225ENST00000556798 ABLIM1O14639 778 aa19.17■□□□□ 0.66
SHMT2-225ENST00000556798 HOXA2O43364 376 aa19.17■□□□□ 0.66
SHMT2-225ENST00000556798 PRPF6O94906 941 aaKnown RBP19.17■□□□□ 0.66
SHMT2-225ENST00000556798 PROZP22891 400 aa19.17■□□□□ 0.66
SHMT2-225ENST00000556798 AKAP5P24588 427 aa19.17■□□□□ 0.66
SHMT2-225ENST00000556798 LIG4P49917 911 aa19.17■□□□□ 0.66
SHMT2-225ENST00000556798 EHHADHQ08426 723 aa19.17■□□□□ 0.66
SHMT2-225ENST00000556798 DCAF4L1Q3SXM0 396 aa19.17■□□□□ 0.66
SHMT2-225ENST00000556798 MPZL3Q6UWV2 235 aa19.17■□□□□ 0.66
SHMT2-225ENST00000556798 ZPBP2Q6X784 338 aa19.17■□□□□ 0.66
SHMT2-225ENST00000556798 CEP120Q8N960 986 aa19.17■□□□□ 0.66
SHMT2-225ENST00000556798 GBP4Q96PP9 640 aa19.17■□□□□ 0.66
SHMT2-225ENST00000556798 TCHPQ9BT92 498 aa19.17■□□□□ 0.66
SHMT2-225ENST00000556798 TMEM117Q9H0C3 514 aa19.17■□□□□ 0.66
SHMT2-225ENST00000556798 RSAD1Q9HA92 442 aa19.17■□□□□ 0.66
SHMT2-225ENST00000556798 SNTG2Q9NY99 539 aa19.17■□□□□ 0.66
SHMT2-225ENST00000556798 MRPL42Q9Y6G3 142 aaKnown RBP19.17■□□□□ 0.66
SHMT2-225ENST00000556798 ANK1P16157 1881 aa19.17■□□□□ 0.66
SHMT2-225ENST00000556798 PLXNA4Q9HCM2 1894 aa19.17■□□□□ 0.66
SHMT2-225ENST00000556798 ATG2AQ2TAZ0 1938 aa19.16■□□□□ 0.66
SHMT2-225ENST00000556798 PVALEFA0A1B0GWK0 134 aa19.16■□□□□ 0.66
SHMT2-225ENST00000556798 TISP43B9A030 160 aa19.16■□□□□ 0.66
SHMT2-225ENST00000556798 RPN1P04843 607 aaKnown RBP19.16■□□□□ 0.66
SHMT2-225ENST00000556798 MYL1P05976 194 aa19.16■□□□□ 0.66
SHMT2-225ENST00000556798 SCP2P22307 547 aa19.16■□□□□ 0.66
SHMT2-225ENST00000556798 MLH1P40692 756 aa19.16■□□□□ 0.66
SHMT2-225ENST00000556798 MATR3P43243 847 aaKnown RBP eCLIP19.16■□□□□ 0.66
SHMT2-225ENST00000556798 AFF1P51825 1210 aaKnown RBP19.16■□□□□ 0.66
SHMT2-225ENST00000556798 DPYDQ12882 1025 aa19.16■□□□□ 0.66
SHMT2-225ENST00000556798 PNOCQ13519 176 aa19.16■□□□□ 0.66
SHMT2-225ENST00000556798 POSTNQ15063 836 aa19.16■□□□□ 0.66
SHMT2-225ENST00000556798 KMT5BQ4FZB7 885 aa19.16■□□□□ 0.66
SHMT2-225ENST00000556798 L1TD1Q5T7N2 865 aaKnown RBP19.16■□□□□ 0.66
SHMT2-225ENST00000556798 SLC39A4Q6P5W5 647 aa19.16■□□□□ 0.66
SHMT2-225ENST00000556798 GLB1LQ6UWU2 654 aa19.16■□□□□ 0.66
SHMT2-225ENST00000556798 HVCN1Q96D96 273 aa19.16■□□□□ 0.66
SHMT2-225ENST00000556798 C17orf80Q9BSJ5 609 aa19.16■□□□□ 0.66
SHMT2-225ENST00000556798 HAPLN2Q9GZV7 340 aa19.16■□□□□ 0.66
SHMT2-225ENST00000556798 EXOC1Q9NV70 894 aa19.16■□□□□ 0.66
SHMT2-225ENST00000556798 KLK14Q9P0G3 267 aa19.16■□□□□ 0.66
SHMT2-225ENST00000556798 PARP2Q9UGN5 583 aa19.16■□□□□ 0.66
SHMT2-225ENST00000556798 GDAQ9Y2T3 454 aa19.16■□□□□ 0.66
SHMT2-225ENST00000556798 TMEM265A0A087WTH1 108 aa19.15■□□□□ 0.66
SHMT2-225ENST00000556798 ANKRD63C9JTQ0 380 aa19.15■□□□□ 0.66
SHMT2-225ENST00000556798 KINO60870 393 aaKnown RBP19.15■□□□□ 0.66
SHMT2-225ENST00000556798 OFD1O75665 1012 aa19.15■□□□□ 0.66
SHMT2-225ENST00000556798 TOM1L1O75674 476 aa19.15■□□□□ 0.66
SHMT2-225ENST00000556798 PIGRP01833 764 aa19.15■□□□□ 0.66
SHMT2-225ENST00000556798 ABCD1P33897 745 aa19.15■□□□□ 0.66
SHMT2-225ENST00000556798 OSTNP61366 133 aa19.15■□□□□ 0.66
SHMT2-225ENST00000556798 NOLC1Q14978 699 aaKnown RBP eCLIP19.15■□□□□ 0.66
SHMT2-225ENST00000556798 KANK3Q6NY19 840 aa19.15■□□□□ 0.66
SHMT2-225ENST00000556798 LRRC55Q6ZSA7 311 aa19.15■□□□□ 0.66
SHMT2-225ENST00000556798 HACE1Q8IYU2 909 aa19.15■□□□□ 0.66
SHMT2-225ENST00000556798 LRRC43Q8N309 656 aa19.15■□□□□ 0.66
SHMT2-225ENST00000556798 ARNTL2Q8WYA1 636 aa19.15■□□□□ 0.66
SHMT2-225ENST00000556798 ERCC4Q92889 916 aaPredicted RBP19.15■□□□□ 0.66
SHMT2-225ENST00000556798 CCDC34Q96HJ3 373 aa19.15■□□□□ 0.66
SHMT2-225ENST00000556798 ZFP42Q96MM3 310 aa19.15■□□□□ 0.66
SHMT2-225ENST00000556798 ACCSQ96QU6 501 aa19.15■□□□□ 0.66
SHMT2-225ENST00000556798 GAD1Q99259 594 aa19.15■□□□□ 0.66
SHMT2-225ENST00000556798 SLC39A2Q9NP94 309 aa19.15■□□□□ 0.66
SHMT2-225ENST00000556798 PCDHB13Q9Y5F0 798 aa19.15■□□□□ 0.66
SHMT2-225ENST00000556798 RECQL4O94761 1208 aa19.14■□□□□ 0.65
SHMT2-225ENST00000556798 LINC00271P0C7V0 271 aa19.14■□□□□ 0.65
SHMT2-225ENST00000556798 MCF2P10911 925 aa19.14■□□□□ 0.65
SHMT2-225ENST00000556798 ALCAMQ13740 583 aa19.14■□□□□ 0.65
SHMT2-225ENST00000556798 SEZ6Q53EL9 994 aa19.14■□□□□ 0.65
SHMT2-225ENST00000556798 NOMO2Q5JPE7 1267 aa19.14■□□□□ 0.65
SHMT2-225ENST00000556798 GPR153Q6NV75 609 aa19.14■□□□□ 0.65
SHMT2-225ENST00000556798 APBB1IPQ7Z5R6 666 aaPredicted RBP19.14■□□□□ 0.65
SHMT2-225ENST00000556798 TMEM192Q8IY95 271 aa19.14■□□□□ 0.65
SHMT2-225ENST00000556798 THNSL1Q8IYQ7 743 aa19.14■□□□□ 0.65
SHMT2-225ENST00000556798 TIGD1Q96MW7 591 aa19.14■□□□□ 0.65
SHMT2-225ENST00000556798 TGS1Q96RS0 853 aaKnown RBP19.14■□□□□ 0.65
SHMT2-225ENST00000556798 SEMA6BQ9H3T3 888 aa19.14■□□□□ 0.65
SHMT2-225ENST00000556798 TYW1Q9NV66 732 aaKnown RBP19.14■□□□□ 0.65
SHMT2-225ENST00000556798 ARL5CA6NH57 179 aa19.13■□□□□ 0.65
SHMT2-225ENST00000556798 EPOPA6NHQ4 379 aa19.13■□□□□ 0.65
SHMT2-225ENST00000556798 CLDN3O15551 220 aa19.13■□□□□ 0.65
SHMT2-225ENST00000556798 POMCP01189 267 aa19.13■□□□□ 0.65
SHMT2-225ENST00000556798 ERVK-21P61565 698 aa19.13■□□□□ 0.65
SHMT2-225ENST00000556798 MCL1Q07820 350 aa19.13■□□□□ 0.65
SHMT2-225ENST00000556798 STK4Q13043 487 aa19.13■□□□□ 0.65
SHMT2-225ENST00000556798 GRIN2CQ14957 1233 aa19.13■□□□□ 0.65
SHMT2-225ENST00000556798 SPOUT1Q5T280 376 aaKnown RBP19.13■□□□□ 0.65
SHMT2-225ENST00000556798 STXBP4Q6ZWJ1 553 aa19.13■□□□□ 0.65
SHMT2-225ENST00000556798 EPM2AIP1Q7L775 607 aaPredicted RBP19.13■□□□□ 0.65
SHMT2-225ENST00000556798 SYCP3Q8IZU3 236 aa19.13■□□□□ 0.65
SHMT2-225ENST00000556798 DEFB123Q8N688 67 aa19.13■□□□□ 0.65
SHMT2-225ENST00000556798 KIAA0895Q8NCT3 520 aa19.13■□□□□ 0.65
SHMT2-225ENST00000556798 MRPL9Q9BYD2 267 aaKnown RBP19.13■□□□□ 0.65
SHMT2-225ENST00000556798 CXCL16Q9H2A7 254 aa19.13■□□□□ 0.65
SHMT2-225ENST00000556798 UBN1Q9NPG3 1134 aa19.13■□□□□ 0.65
SHMT2-225ENST00000556798 LMBRD1Q9NUN5 540 aa19.13■□□□□ 0.65
SHMT2-225ENST00000556798 TBC1D13Q9NVG8 400 aa19.13■□□□□ 0.65
SHMT2-225ENST00000556798 EXOC7Q9UPT5 735 aa19.13■□□□□ 0.65
SHMT2-225ENST00000556798 GIT1Q9Y2X7 761 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 107.3 ms