RNA–Protein interactions for RNA: ENST00000556712.5

SNX6-208, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 851 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-208ENST00000556712 PRG3Q9Y2Y8 225 aaPredicted RBP11.42□□□□□ -0.58
SNX6-208ENST00000556712 PDCD11Q14690 1871 aaKnown RBP11.42□□□□□ -0.58
SNX6-208ENST00000556712 VCANP13611 3396 aa11.41□□□□□ -0.58
SNX6-208ENST00000556712 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.41□□□□□ -0.58
SNX6-208ENST00000556712 HIDE1A8MVS5 230 aa11.41□□□□□ -0.58
SNX6-208ENST00000556712 DLL1O00548 723 aa11.41□□□□□ -0.58
SNX6-208ENST00000556712 PER2O15055 1255 aa11.41□□□□□ -0.58
SNX6-208ENST00000556712 SPTLC2O15270 562 aa11.41□□□□□ -0.58
SNX6-208ENST00000556712 INPPL1O15357 1258 aa11.41□□□□□ -0.58
SNX6-208ENST00000556712 RECQL4O94761 1208 aa11.41□□□□□ -0.58
SNX6-208ENST00000556712 GLP2RO95838 553 aa11.41□□□□□ -0.58
SNX6-208ENST00000556712 KRT18P05783 430 aaKnown RBP11.41□□□□□ -0.58
SNX6-208ENST00000556712 HARSP12081 509 aaKnown RBP11.41□□□□□ -0.58
SNX6-208ENST00000556712 TXLNAP40222 546 aa11.41□□□□□ -0.58
SNX6-208ENST00000556712 ALDH7A1P49419 539 aaKnown RBP11.41□□□□□ -0.58
SNX6-208ENST00000556712 EFNA5P52803 228 aa11.41□□□□□ -0.58
SNX6-208ENST00000556712 ZNF568Q3ZCX4 644 aa11.41□□□□□ -0.58
SNX6-208ENST00000556712 COLGALT2Q8IYK4 626 aa11.41□□□□□ -0.58
SNX6-208ENST00000556712 HACE1Q8IYU2 909 aa11.41□□□□□ -0.58
SNX6-208ENST00000556712 KCTD17Q8N5Z5 321 aa11.41□□□□□ -0.58
SNX6-208ENST00000556712 TMEM161BQ8NDZ6 487 aa11.41□□□□□ -0.58
SNX6-208ENST00000556712 ADAMTS19Q8TE59 1207 aa11.41□□□□□ -0.58
SNX6-208ENST00000556712 AUTS2Q8WXX7 1259 aa11.41□□□□□ -0.58
SNX6-208ENST00000556712 RABGGTAQ92696 567 aa11.41□□□□□ -0.58
SNX6-208ENST00000556712 PABPC5Q96DU9 382 aaKnown RBP11.41□□□□□ -0.58
SNX6-208ENST00000556712 TMEM169Q96HH4 297 aa11.41□□□□□ -0.58
SNX6-208ENST00000556712 IGSF21Q96ID5 467 aa11.41□□□□□ -0.58
SNX6-208ENST00000556712 ZNF396Q96N95 335 aaPredicted RBP11.41□□□□□ -0.58
SNX6-208ENST00000556712 FAM193BQ96PV7 902 aaPredicted RBP11.41□□□□□ -0.58
SNX6-208ENST00000556712 RPS6KC1Q96S38 1066 aa11.41□□□□□ -0.58
SNX6-208ENST00000556712 ADPGKQ9BRR6 497 aa11.41□□□□□ -0.58
SNX6-208ENST00000556712 TARS2Q9BW92 718 aaKnown RBP11.41□□□□□ -0.58
SNX6-208ENST00000556712 PANK2Q9BZ23 570 aa11.41□□□□□ -0.58
SNX6-208ENST00000556712 ZHX3Q9H4I2 956 aa11.41□□□□□ -0.58
SNX6-208ENST00000556712 UBN1Q9NPG3 1134 aa11.41□□□□□ -0.58
SNX6-208ENST00000556712 MARCH5Q9NX47 278 aa11.41□□□□□ -0.58
SNX6-208ENST00000556712 KCND2Q9NZV8 630 aa11.41□□□□□ -0.58
SNX6-208ENST00000556712 CCDC39Q9UFE4 941 aa11.41□□□□□ -0.58
SNX6-208ENST00000556712 LZTS1Q9Y250 596 aa11.41□□□□□ -0.58
SNX6-208ENST00000556712 GDAQ9Y2T3 454 aa11.41□□□□□ -0.58
SNX6-208ENST00000556712 GIT1Q9Y2X7 761 aa11.41□□□□□ -0.58
SNX6-208ENST00000556712 CITO14578 2027 aa11.4□□□□□ -0.58
SNX6-208ENST00000556712 K7ENM7 598 aa11.4□□□□□ -0.58
SNX6-208ENST00000556712 NRP1O14786 923 aa11.4□□□□□ -0.58
SNX6-208ENST00000556712 TBCAO75347 108 aaKnown RBP11.4□□□□□ -0.58
SNX6-208ENST00000556712 FAM13AO94988 1023 aa11.4□□□□□ -0.58
SNX6-208ENST00000556712 MAPTP10636 758 aaKnown RBP11.4□□□□□ -0.58
SNX6-208ENST00000556712 LTBRP36941 435 aa11.4□□□□□ -0.58
SNX6-208ENST00000556712 OR1G1P47890 313 aa11.4□□□□□ -0.58
SNX6-208ENST00000556712 NCKAP1LP55160 1127 aa11.4□□□□□ -0.58
SNX6-208ENST00000556712 KRT17Q04695 432 aa11.4□□□□□ -0.58
SNX6-208ENST00000556712 DSC1Q08554 894 aa11.4□□□□□ -0.58
SNX6-208ENST00000556712 GIT2Q14161 759 aa11.4□□□□□ -0.58
SNX6-208ENST00000556712 COL19A1Q14993 1142 aa11.4□□□□□ -0.58
SNX6-208ENST00000556712 DUSP6Q16828 381 aa11.4□□□□□ -0.58
SNX6-208ENST00000556712 DCAF4L1Q3SXM0 396 aa11.4□□□□□ -0.58
SNX6-208ENST00000556712 DYMQ7RTS9 669 aa11.4□□□□□ -0.58
SNX6-208ENST00000556712 TMC7Q7Z402 723 aa11.4□□□□□ -0.58
SNX6-208ENST00000556712 ZBTB33Q86T24 672 aa11.4□□□□□ -0.58
SNX6-208ENST00000556712 PDILTQ8N807 584 aa11.4□□□□□ -0.58
SNX6-208ENST00000556712 GSTCDQ8NEC7 633 aa11.4□□□□□ -0.58
SNX6-208ENST00000556712 VN1R2Q8NFZ6 395 aa11.4□□□□□ -0.58
SNX6-208ENST00000556712 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.4□□□□□ -0.58
SNX6-208ENST00000556712 SPIRE2Q8WWL2 714 aa11.4□□□□□ -0.58
SNX6-208ENST00000556712 RSPH1Q8WYR4 309 aa11.4□□□□□ -0.58
SNX6-208ENST00000556712 ACO2Q99798 780 aaKnown RBP11.4□□□□□ -0.58
SNX6-208ENST00000556712 MRPL4Q9BYD3 311 aaKnown RBP11.4□□□□□ -0.58
SNX6-208ENST00000556712 ZBP1Q9H171 429 aa11.4□□□□□ -0.58
SNX6-208ENST00000556712 CDT1Q9H211 546 aa11.4□□□□□ -0.58
SNX6-208ENST00000556712 TMEM134Q9H6X4 195 aa11.4□□□□□ -0.58
SNX6-208ENST00000556712 C17orf75Q9HAS0 396 aa11.4□□□□□ -0.58
SNX6-208ENST00000556712 ANKFY1Q9P2R3 1169 aa11.4□□□□□ -0.58
SNX6-208ENST00000556712 ODF2LQ9ULJ1 636 aa11.4□□□□□ -0.58
SNX6-208ENST00000556712 BARX2Q9UMQ3 279 aaPredicted RBP11.4□□□□□ -0.58
SNX6-208ENST00000556712 TNFSF13BQ9Y275 285 aa11.4□□□□□ -0.58
SNX6-208ENST00000556712 MORC2Q9Y6X9 1032 aaPredicted RBP11.4□□□□□ -0.58
SNX6-208ENST00000556712 PLXNA3P51805 1871 aa11.4□□□□□ -0.59
SNX6-208ENST00000556712 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.39□□□□□ -0.59
SNX6-208ENST00000556712 MYMKA6NI61 221 aa11.39□□□□□ -0.59
SNX6-208ENST00000556712 ABLIM1O14639 778 aa11.39□□□□□ -0.59
SNX6-208ENST00000556712 PTGESO14684 152 aa11.39□□□□□ -0.59
SNX6-208ENST00000556712 YEATS4O95619 227 aa11.39□□□□□ -0.59
SNX6-208ENST00000556712 BMP1P13497 986 aa11.39□□□□□ -0.59
SNX6-208ENST00000556712 IL9P15248 144 aa11.39□□□□□ -0.59
SNX6-208ENST00000556712 NMT1P30419 496 aaKnown RBP11.39□□□□□ -0.59
SNX6-208ENST00000556712 STAT6P42226 847 aa11.39□□□□□ -0.59
SNX6-208ENST00000556712 NDUFV1P49821 464 aa11.39□□□□□ -0.59
SNX6-208ENST00000556712 ZNF131P52739 623 aa11.39□□□□□ -0.59
SNX6-208ENST00000556712 SMTNP53814 917 aa11.39□□□□□ -0.59
SNX6-208ENST00000556712 OSTNP61366 133 aa11.39□□□□□ -0.59
SNX6-208ENST00000556712 DNM1Q05193 864 aaKnown RBP11.39□□□□□ -0.59
SNX6-208ENST00000556712 GRIK3Q13003 919 aa11.39□□□□□ -0.59
SNX6-208ENST00000556712 SMC1AQ14683 1233 aaKnown RBP11.39□□□□□ -0.59
SNX6-208ENST00000556712 AAK1Q2M2I8 961 aa11.39□□□□□ -0.59
SNX6-208ENST00000556712 CTC1Q2NKJ3 1217 aa11.39□□□□□ -0.59
SNX6-208ENST00000556712 LEXMQ3ZCV2 418 aa11.39□□□□□ -0.59
SNX6-208ENST00000556712 SEZ6Q53EL9 994 aa11.39□□□□□ -0.59
SNX6-208ENST00000556712 GLRA4Q5JXX5 417 aa11.39□□□□□ -0.59
SNX6-208ENST00000556712 RRAGBQ5VZM2 374 aa11.39□□□□□ -0.59
SNX6-208ENST00000556712 LLGL2Q6P1M3 1020 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms