RNA–Protein interactions for RNA: ENST00000556256.1

SCFD1-218, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-218ENST00000556256 APBA1Q02410 837 aa5.13□□□□□ -1.59
SCFD1-218ENST00000556256 SCAPQ12770 1279 aa5.13□□□□□ -1.59
SCFD1-218ENST00000556256 SERINC3Q13530 473 aa5.13□□□□□ -1.59
SCFD1-218ENST00000556256 UBE3CQ15386 1083 aa5.13□□□□□ -1.59
SCFD1-218ENST00000556256 CREB3L3Q68CJ9 461 aa5.13□□□□□ -1.59
SCFD1-218ENST00000556256 ARHGEF25Q86VW2 580 aa5.13□□□□□ -1.59
SCFD1-218ENST00000556256 CDYL2Q8N8U2 506 aa5.13□□□□□ -1.59
SCFD1-218ENST00000556256 CLUHP3Q96NS8 147 aa5.13□□□□□ -1.59
SCFD1-218ENST00000556256 SNTG2Q9NY99 539 aa5.13□□□□□ -1.59
SCFD1-218ENST00000556256 USP18Q9UMW8 372 aa5.13□□□□□ -1.59
SCFD1-218ENST00000556256 A0A1W2PR48 441 aa5.12□□□□□ -1.59
SCFD1-218ENST00000556256 CBX4O00257 560 aa5.12□□□□□ -1.59
SCFD1-218ENST00000556256 PLD2O14939 933 aa5.12□□□□□ -1.59
SCFD1-218ENST00000556256 ASLP04424 464 aa5.12□□□□□ -1.59
SCFD1-218ENST00000556256 MGAT1P26572 445 aa5.12□□□□□ -1.59
SCFD1-218ENST00000556256 RARRES1P49788 294 aa5.12□□□□□ -1.59
SCFD1-218ENST00000556256 ZNF460Q14592 562 aa5.12□□□□□ -1.59
SCFD1-218ENST00000556256 PIK3R6Q5UE93 754 aa5.12□□□□□ -1.59
SCFD1-218ENST00000556256 ZZZ3Q8IYH5 903 aa5.12□□□□□ -1.59
SCFD1-218ENST00000556256 C9orf106Q8NAJ2 232 aa5.12□□□□□ -1.59
SCFD1-218ENST00000556256 RNF169Q8NCN4 708 aa5.12□□□□□ -1.59
SCFD1-218ENST00000556256 NEU1Q99519 415 aa5.12□□□□□ -1.59
SCFD1-218ENST00000556256 ZMAT4Q9H898 229 aa5.12□□□□□ -1.59
SCFD1-218ENST00000556256 OXSMQ9NWU1 459 aa5.12□□□□□ -1.59
SCFD1-218ENST00000556256 CCDC9Q9Y3X0 531 aaKnown RBP5.12□□□□□ -1.59
SCFD1-218ENST00000556256 B5MCH6 92 aa5.11□□□□□ -1.59
SCFD1-218ENST00000556256 MGST3O14880 152 aa5.11□□□□□ -1.59
SCFD1-218ENST00000556256 OPA1O60313 960 aa5.11□□□□□ -1.59
SCFD1-218ENST00000556256 CDKL5O76039 1030 aa5.11□□□□□ -1.59
SCFD1-218ENST00000556256 FOSP01100 380 aaPredicted RBP5.11□□□□□ -1.59
SCFD1-218ENST00000556256 CFIP05156 583 aa5.11□□□□□ -1.59
SCFD1-218ENST00000556256 FDXRP22570 491 aa5.11□□□□□ -1.59
SCFD1-218ENST00000556256 BMT2Q1RMZ1 405 aa5.11□□□□□ -1.59
SCFD1-218ENST00000556256 GPR149Q86SP6 731 aa5.11□□□□□ -1.59
SCFD1-218ENST00000556256 GAB3Q8WWW8 586 aa5.11□□□□□ -1.59
SCFD1-218ENST00000556256 TFAP2CQ92754 450 aa5.11□□□□□ -1.59
SCFD1-218ENST00000556256 FERMT2Q96AC1 680 aa5.11□□□□□ -1.59
SCFD1-218ENST00000556256 Q96MF0 132 aa5.11□□□□□ -1.59
SCFD1-218ENST00000556256 DNAJC8O75937 253 aaPredicted RBP5.1□□□□□ -1.59
SCFD1-218ENST00000556256 PFKMP08237 780 aa5.1□□□□□ -1.59
SCFD1-218ENST00000556256 KRTAP5-6Q6L8G9 129 aaPredicted RBP5.1□□□□□ -1.59
SCFD1-218ENST00000556256 ARMC6Q6NXE6 501 aa5.1□□□□□ -1.59
SCFD1-218ENST00000556256 C1QL2Q7Z5L3 287 aa5.1□□□□□ -1.59
SCFD1-218ENST00000556256 Q8N9P0 234 aaPredicted RBP5.1□□□□□ -1.59
SCFD1-218ENST00000556256 ZNF496Q96IT1 587 aaPredicted RBP5.1□□□□□ -1.59
SCFD1-218ENST00000556256 MTFR1LQ9H019 292 aa5.1□□□□□ -1.59
SCFD1-218ENST00000556256 H2AFY2Q9P0M6 372 aaPredicted RBP5.1□□□□□ -1.59
SCFD1-218ENST00000556256 PTCH2Q9Y6C5 1203 aa5.1□□□□□ -1.59
SCFD1-218ENST00000556256 XPAP23025 273 aaPredicted RBP5.09□□□□□ -1.59
SCFD1-218ENST00000556256 CACNA2D1P54289 1103 aa5.09□□□□□ -1.59
SCFD1-218ENST00000556256 MXRA7P84157 204 aa5.09□□□□□ -1.59
SCFD1-218ENST00000556256 MGAT5Q09328 741 aa5.09□□□□□ -1.59
SCFD1-218ENST00000556256 LRRC32Q14392 662 aa5.09□□□□□ -1.59
SCFD1-218ENST00000556256 LMBR1LQ6UX01 489 aa5.09□□□□□ -1.59
SCFD1-218ENST00000556256 SH2D3CQ8N5H7 860 aa5.09□□□□□ -1.59
SCFD1-218ENST00000556256 ZNF366Q8N895 744 aa5.09□□□□□ -1.59
SCFD1-218ENST00000556256 ZNF778Q96MU6 729 aa5.09□□□□□ -1.59
SCFD1-218ENST00000556256 CDC5LQ99459 802 aaKnown RBP5.09□□□□□ -1.59
SCFD1-218ENST00000556256 FOXJ2Q9P0K8 574 aa5.09□□□□□ -1.59
SCFD1-218ENST00000556256 CGB1A6NKQ9 187 aa5.08□□□□□ -1.6
SCFD1-218ENST00000556256 DRGXA6NNA5 263 aa5.08□□□□□ -1.6
SCFD1-218ENST00000556256 ATP2A2P16615 1042 aaKnown RBP5.08□□□□□ -1.6
SCFD1-218ENST00000556256 ATP2B1P20020 1258 aa5.08□□□□□ -1.6
SCFD1-218ENST00000556256 CD40P25942 277 aa5.08□□□□□ -1.6
SCFD1-218ENST00000556256 GPR15P49685 360 aa5.08□□□□□ -1.6
SCFD1-218ENST00000556256 ZNF81P51508 661 aa5.08□□□□□ -1.6
SCFD1-218ENST00000556256 SRSF4Q08170 494 aaKnown RBP5.08□□□□□ -1.6
SCFD1-218ENST00000556256 MAPK7Q13164 816 aa5.08□□□□□ -1.6
SCFD1-218ENST00000556256 ZBTB41Q5SVQ8 909 aa5.08□□□□□ -1.6
SCFD1-218ENST00000556256 AGAP9Q5VTM2 703 aa5.08□□□□□ -1.6
SCFD1-218ENST00000556256 CDCA2Q69YH5 1023 aaPredicted RBP5.08□□□□□ -1.6
SCFD1-218ENST00000556256 Q6ZNX1 250 aa5.08□□□□□ -1.6
SCFD1-218ENST00000556256 ESPNLQ6ZVH7 1005 aa5.08□□□□□ -1.6
SCFD1-218ENST00000556256 UBE2R2Q712K3 238 aaPredicted RBP5.08□□□□□ -1.6
SCFD1-218ENST00000556256 C1QTNF7Q9BXJ2 289 aa5.08□□□□□ -1.6
SCFD1-218ENST00000556256 KRTAP1-5Q9BYS1 174 aa5.08□□□□□ -1.6
SCFD1-218ENST00000556256 ATP11BQ9Y2G3 1177 aa5.08□□□□□ -1.6
SCFD1-218ENST00000556256 ST20-MTHFSA0A0A6YYL1 179 aa5.07□□□□□ -1.6
SCFD1-218ENST00000556256 NRP2O60462 931 aa5.07□□□□□ -1.6
SCFD1-218ENST00000556256 ELANEP08246 267 aa5.07□□□□□ -1.6
SCFD1-218ENST00000556256 JMJD7P0C870 316 aa5.07□□□□□ -1.6
SCFD1-218ENST00000556256 CHN2P52757 468 aa5.07□□□□□ -1.6
SCFD1-218ENST00000556256 KRTAP10-7P60409 375 aaPredicted RBP5.07□□□□□ -1.6
SCFD1-218ENST00000556256 FNDC3BQ53EP0 1204 aaKnown RBP5.07□□□□□ -1.6
SCFD1-218ENST00000556256 C2orf27AQ580R0 203 aa5.07□□□□□ -1.6
SCFD1-218ENST00000556256 TMEM132CQ8N3T6 1108 aa5.07□□□□□ -1.6
SCFD1-218ENST00000556256 OR56A1Q8NGH5 318 aa5.07□□□□□ -1.6
SCFD1-218ENST00000556256 MDM1Q8TC05 714 aa5.07□□□□□ -1.6
SCFD1-218ENST00000556256 CEP95Q96GE4 821 aa5.07□□□□□ -1.6
SCFD1-218ENST00000556256 KLK15Q9H2R5 256 aa5.07□□□□□ -1.6
SCFD1-218ENST00000556256 MSRAQ9UJ68 235 aa5.07□□□□□ -1.6
SCFD1-218ENST00000556256 PROP1O75360 226 aa5.06□□□□□ -1.6
SCFD1-218ENST00000556256 ITGA10O75578 1167 aa5.06□□□□□ -1.6
SCFD1-218ENST00000556256 LTA4HP09960 611 aaKnown RBP5.06□□□□□ -1.6
SCFD1-218ENST00000556256 NRG3P56975 720 aa5.06□□□□□ -1.6
SCFD1-218ENST00000556256 CFAP100Q494V2 611 aa5.06□□□□□ -1.6
SCFD1-218ENST00000556256 SPDYE7PQ495Y7 208 aa5.06□□□□□ -1.6
SCFD1-218ENST00000556256 CCDC178Q5BJE1 867 aa5.06□□□□□ -1.6
SCFD1-218ENST00000556256 C19orf54Q5BKX5 351 aa5.06□□□□□ -1.6
SCFD1-218ENST00000556256 B3GNTL1Q67FW5 361 aaPredicted RBP5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms