RNA–Protein interactions for RNA: ENST00000556162.5

SNX6-206, Transcript of sorting nexin 6, humanhuman

TSL 2

Gene SNX6, Length 1,855 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-206ENST00000556162 NELFCDQ8IXH7 590 aa15.48■□□□□ 0.07
SNX6-206ENST00000556162 YME1L1Q96TA2 773 aa15.48■□□□□ 0.07
SNX6-206ENST00000556162 CDT1Q9H211 546 aa15.48■□□□□ 0.07
SNX6-206ENST00000556162 UBN1Q9NPG3 1134 aa15.48■□□□□ 0.07
SNX6-206ENST00000556162 HES2Q9Y543 173 aa15.48■□□□□ 0.07
SNX6-206ENST00000556162 ABLIM1O14639 778 aa15.48■□□□□ 0.07
SNX6-206ENST00000556162 DGKIO75912 1065 aa15.48■□□□□ 0.07
SNX6-206ENST00000556162 HARSP12081 509 aaKnown RBP15.48■□□□□ 0.07
SNX6-206ENST00000556162 MCL1Q07820 350 aa15.48■□□□□ 0.07
SNX6-206ENST00000556162 NOLC1Q14978 699 aaKnown RBP eCLIP15.48■□□□□ 0.07
SNX6-206ENST00000556162 ZNF658Q5TYW1 1059 aaPredicted RBP15.48■□□□□ 0.07
SNX6-206ENST00000556162 ABI1Q8IZP0 508 aa15.48■□□□□ 0.07
SNX6-206ENST00000556162 LPPQ93052 612 aa15.48■□□□□ 0.07
SNX6-206ENST00000556162 APOL6Q9BWW8 343 aa15.48■□□□□ 0.07
SNX6-206ENST00000556162 GBP3Q9H0R5 595 aa15.48■□□□□ 0.07
SNX6-206ENST00000556162 NXF3Q9H4D5 531 aaKnown RBP15.48■□□□□ 0.07
SNX6-206ENST00000556162 MAN1B1Q9UKM7 699 aa15.48■□□□□ 0.07
SNX6-206ENST00000556162 GDAQ9Y2T3 454 aa15.48■□□□□ 0.07
SNX6-206ENST00000556162 FGFR1P11362 822 aa15.47■□□□□ 0.07
SNX6-206ENST00000556162 HOXD13P35453 343 aa15.47■□□□□ 0.07
SNX6-206ENST00000556162 RABGGTBP53611 331 aa15.47■□□□□ 0.07
SNX6-206ENST00000556162 KNOP1Q1ED39 458 aaKnown RBP15.47■□□□□ 0.07
SNX6-206ENST00000556162 ISM2Q6H9L7 571 aa15.47■□□□□ 0.07
SNX6-206ENST00000556162 SLC39A4Q6P5W5 647 aa15.47■□□□□ 0.07
SNX6-206ENST00000556162 HS2ST1Q7LGA3 356 aa15.47■□□□□ 0.07
SNX6-206ENST00000556162 POMGNT1Q8WZA1 660 aa15.47■□□□□ 0.07
SNX6-206ENST00000556162 MSTO1Q9BUK6 570 aa15.47■□□□□ 0.07
SNX6-206ENST00000556162 RNF39Q9H2S5 420 aa15.47■□□□□ 0.07
SNX6-206ENST00000556162 IKZF4Q9H2S9 585 aa15.47■□□□□ 0.07
SNX6-206ENST00000556162 SNTG2Q9NY99 539 aa15.47■□□□□ 0.07
SNX6-206ENST00000556162 PARP2Q9UGN5 583 aa15.47■□□□□ 0.07
SNX6-206ENST00000556162 MSRAQ9UJ68 235 aa15.47■□□□□ 0.07
SNX6-206ENST00000556162 MAPK8IP1Q9UQF2 711 aa15.47■□□□□ 0.07
SNX6-206ENST00000556162 PCDHA11Q9Y5I1 949 aa15.47■□□□□ 0.07
SNX6-206ENST00000556162 STYXL1Q9Y6J8 313 aa15.47■□□□□ 0.07
SNX6-206ENST00000556162 A0A0B4J269 797 aa15.46■□□□□ 0.07
SNX6-206ENST00000556162 TISP43B9A030 160 aa15.46■□□□□ 0.07
SNX6-206ENST00000556162 AKAP5P24588 427 aa15.46■□□□□ 0.07
SNX6-206ENST00000556162 SNRPFP62306 86 aaKnown RBP15.46■□□□□ 0.07
SNX6-206ENST00000556162 HTRA4P83105 476 aaPredicted RBP15.46■□□□□ 0.07
SNX6-206ENST00000556162 SMAD3P84022 425 aaKnown RBP15.46■□□□□ 0.07
SNX6-206ENST00000556162 RAB30Q15771 203 aa15.46■□□□□ 0.07
SNX6-206ENST00000556162 GLB1LQ6UWU2 654 aa15.46■□□□□ 0.07
SNX6-206ENST00000556162 AGMOQ6ZNB7 445 aa15.46■□□□□ 0.07
SNX6-206ENST00000556162 THNSL1Q8IYQ7 743 aa15.46■□□□□ 0.07
SNX6-206ENST00000556162 GUF1Q8N442 669 aaKnown RBP15.46■□□□□ 0.07
SNX6-206ENST00000556162 CCDC94Q9BW85 323 aaPredicted RBP15.46■□□□□ 0.07
SNX6-206ENST00000556162 RSAD1Q9HA92 442 aa15.46■□□□□ 0.07
SNX6-206ENST00000556162 GIT1Q9Y2X7 761 aa15.46■□□□□ 0.07
SNX6-206ENST00000556162 TRIOBPQ9H2D6 2365 aa15.46■□□□□ 0.07
SNX6-206ENST00000556162 MEIS3P2A8K0S8 358 aa15.46■□□□□ 0.06
SNX6-206ENST00000556162 BIN1O00499 593 aa15.46■□□□□ 0.06
SNX6-206ENST00000556162 GARTP22102 1010 aa15.46■□□□□ 0.06
SNX6-206ENST00000556162 GRM5P41594 1212 aa15.46■□□□□ 0.06
SNX6-206ENST00000556162 OSTNP61366 133 aa15.46■□□□□ 0.06
SNX6-206ENST00000556162 KYAT1Q16773 422 aa15.46■□□□□ 0.06
SNX6-206ENST00000556162 SMYD4Q8IYR2 804 aaPredicted RBP15.46■□□□□ 0.06
SNX6-206ENST00000556162 TRIML1Q8N9V2 468 aa15.46■□□□□ 0.06
SNX6-206ENST00000556162 HELQQ8TDG4 1101 aa15.46■□□□□ 0.06
SNX6-206ENST00000556162 ZNF689Q96CS4 500 aaPredicted RBP15.46■□□□□ 0.06
SNX6-206ENST00000556162 PBX4Q9BYU1 374 aa15.46■□□□□ 0.06
SNX6-206ENST00000556162 HAPLN2Q9GZV7 340 aa15.46■□□□□ 0.06
SNX6-206ENST00000556162 TMEM117Q9H0C3 514 aa15.46■□□□□ 0.06
SNX6-206ENST00000556162 CGNQ9P2M7 1197 aaKnown RBP15.46■□□□□ 0.06
SNX6-206ENST00000556162 AGO2Q9UKV8 859 aaKnown RBP15.46■□□□□ 0.06
SNX6-206ENST00000556162 TBKBP1A7MCY6 615 aa15.45■□□□□ 0.06
SNX6-206ENST00000556162 OGTO15294 1046 aa15.45■□□□□ 0.06
SNX6-206ENST00000556162 TGFB1I1O43294 461 aa15.45■□□□□ 0.06
SNX6-206ENST00000556162 OFD1O75665 1012 aa15.45■□□□□ 0.06
SNX6-206ENST00000556162 ADSSP30520 456 aa15.45■□□□□ 0.06
SNX6-206ENST00000556162 GATMP50440 423 aa15.45■□□□□ 0.06
SNX6-206ENST00000556162 YARSP54577 528 aaKnown RBP15.45■□□□□ 0.06
SNX6-206ENST00000556162 MORC3Q14149 939 aa15.45■□□□□ 0.06
SNX6-206ENST00000556162 BTG3Q14201 252 aaPredicted RBP15.45■□□□□ 0.06
SNX6-206ENST00000556162 CLLU1OSQ5K130 101 aa15.45■□□□□ 0.06
SNX6-206ENST00000556162 ARMCX5Q6P1M9 558 aa15.45■□□□□ 0.06
SNX6-206ENST00000556162 CEP120Q8N960 986 aa15.45■□□□□ 0.06
SNX6-206ENST00000556162 GOLGA5Q8TBA6 731 aa15.45■□□□□ 0.06
SNX6-206ENST00000556162 RSPH1Q8WYR4 309 aa15.45■□□□□ 0.06
SNX6-206ENST00000556162 ACAP3Q96P50 834 aa15.45■□□□□ 0.06
SNX6-206ENST00000556162 PBX2P40425 430 aa15.44■□□□□ 0.06
SNX6-206ENST00000556162 PRCPP42785 496 aa15.44■□□□□ 0.06
SNX6-206ENST00000556162 STIM1Q13586 685 aa15.44■□□□□ 0.06
SNX6-206ENST00000556162 PAN2Q504Q3 1202 aaKnown RBP15.44■□□□□ 0.06
SNX6-206ENST00000556162 COBLL1Q53SF7 1204 aa15.44■□□□□ 0.06
SNX6-206ENST00000556162 CCDC183Q5T5S1 534 aa15.44■□□□□ 0.06
SNX6-206ENST00000556162 CASD1Q96PB1 797 aa15.44■□□□□ 0.06
SNX6-206ENST00000556162 RC3H2Q9HBD1 1191 aaKnown RBP15.44■□□□□ 0.06
SNX6-206ENST00000556162 AGPAT3Q9NRZ7 376 aa15.44■□□□□ 0.06
SNX6-206ENST00000556162 TOPORSQ9NS56 1045 aaPredicted RBP15.44■□□□□ 0.06
SNX6-206ENST00000556162 RNF19AQ9NV58 838 aa15.44■□□□□ 0.06
SNX6-206ENST00000556162 TYW1Q9NV66 732 aaKnown RBP15.44■□□□□ 0.06
SNX6-206ENST00000556162 INPP5FQ9Y2H2 1132 aa15.44■□□□□ 0.06
SNX6-206ENST00000556162 ZMYM2Q9UBW7 1377 aa15.44■□□□□ 0.06
SNX6-206ENST00000556162 ARL5CA6NH57 179 aa15.44■□□□□ 0.06
SNX6-206ENST00000556162 PDXKO00764 312 aa15.44■□□□□ 0.06
SNX6-206ENST00000556162 RECQL4O94761 1208 aa15.44■□□□□ 0.06
SNX6-206ENST00000556162 LDHAP00338 332 aaKnown RBP15.44■□□□□ 0.06
SNX6-206ENST00000556162 CLTAP09496 248 aa15.44■□□□□ 0.06
SNX6-206ENST00000556162 MYOGP15173 224 aa15.44■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms