RNA–Protein interactions for RNA: ENST00000556083.1

ACTN1-216, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 4,674 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-216ENST00000556083 PYCARDQ9ULZ3 195 aa11.35□□□□□ -0.59
ACTN1-216ENST00000556083 DLC1Q96QB1 1528 aa11.35□□□□□ -0.59
ACTN1-216ENST00000556083 ZCCHC11Q5TAX3 1644 aaKnown RBP11.35□□□□□ -0.59
ACTN1-216ENST00000556083 A8MXQ7 604 aa11.35□□□□□ -0.59
ACTN1-216ENST00000556083 HNRNPCL2B2RXH8 293 aa11.35□□□□□ -0.59
ACTN1-216ENST00000556083 CFAP99D6REC4 459 aa11.35□□□□□ -0.59
ACTN1-216ENST00000556083 APOL1O14791 398 aa11.35□□□□□ -0.59
ACTN1-216ENST00000556083 HOXA2O43364 376 aa11.35□□□□□ -0.59
ACTN1-216ENST00000556083 PALMO75781 387 aa11.35□□□□□ -0.59
ACTN1-216ENST00000556083 GARTP22102 1010 aa11.35□□□□□ -0.59
ACTN1-216ENST00000556083 GTF2H3Q13889 308 aa11.35□□□□□ -0.59
ACTN1-216ENST00000556083 DRAP1Q14919 205 aaPredicted RBP11.35□□□□□ -0.59
ACTN1-216ENST00000556083 EFTUD2Q15029 972 aaKnown RBP eCLIP11.35□□□□□ -0.599e-7■■■■□ 20
ACTN1-216ENST00000556083 LRIG3Q6UXM1 1119 aa11.35□□□□□ -0.59
ACTN1-216ENST00000556083 TBC1D1Q86TI0 1168 aaPredicted RBP11.35□□□□□ -0.59
ACTN1-216ENST00000556083 UHMK1Q8TAS1 419 aaKnown RBP11.35□□□□□ -0.59
ACTN1-216ENST00000556083 HPS3Q969F9 1004 aa11.35□□□□□ -0.59
ACTN1-216ENST00000556083 CMTM5Q96DZ9 223 aa11.35□□□□□ -0.59
ACTN1-216ENST00000556083 EIF2AK1Q9BQI3 630 aaKnown RBP11.35□□□□□ -0.59
ACTN1-216ENST00000556083 FAM213AQ9BRX8 229 aa11.35□□□□□ -0.59
ACTN1-216ENST00000556083 RRP15Q9Y3B9 282 aaKnown RBP11.35□□□□□ -0.59
ACTN1-216ENST00000556083 GYG2O15488 501 aa11.35□□□□□ -0.59
ACTN1-216ENST00000556083 HAUS5O94927 633 aa11.35□□□□□ -0.59
ACTN1-216ENST00000556083 GUCY2CP25092 1073 aa11.35□□□□□ -0.59
ACTN1-216ENST00000556083 ACTR2P61160 394 aa11.35□□□□□ -0.59
ACTN1-216ENST00000556083 SPP2Q13103 211 aa11.35□□□□□ -0.59
ACTN1-216ENST00000556083 HSPH1Q92598 858 aa11.35□□□□□ -0.59
ACTN1-216ENST00000556083 N4BP2L2Q92802 583 aaPredicted RBP11.35□□□□□ -0.59
ACTN1-216ENST00000556083 BTBD6Q96KE9 485 aa11.35□□□□□ -0.59
ACTN1-216ENST00000556083 AFF2P51816 1311 aa11.35□□□□□ -0.59
ACTN1-216ENST00000556083 C3orf70A6NLC5 250 aaPredicted RBP11.34□□□□□ -0.59
ACTN1-216ENST00000556083 ANP32DO95626 131 aa11.34□□□□□ -0.59
ACTN1-216ENST00000556083 ITIH2P19823 946 aa11.34□□□□□ -0.59
ACTN1-216ENST00000556083 ST8SIA6P61647 398 aa11.34□□□□□ -0.59
ACTN1-216ENST00000556083 BYSLQ13895 437 aaKnown RBP11.34□□□□□ -0.59
ACTN1-216ENST00000556083 AP1ARQ63HQ0 302 aa11.34□□□□□ -0.59
ACTN1-216ENST00000556083 KCTD16Q68DU8 428 aa11.34□□□□□ -0.59
ACTN1-216ENST00000556083 LDHDQ86WU2 507 aa11.34□□□□□ -0.59
ACTN1-216ENST00000556083 SCN4BQ8IWT1 228 aa11.34□□□□□ -0.59
ACTN1-216ENST00000556083 CNPY3Q9BT09 278 aa11.34□□□□□ -0.59
ACTN1-216ENST00000556083 NUP85Q9BW27 656 aa11.34□□□□□ -0.59
ACTN1-216ENST00000556083 GOLPH3LQ9H4A5 285 aa11.34□□□□□ -0.59
ACTN1-216ENST00000556083 TDRD3Q9H7E2 651 aaKnown RBP11.34□□□□□ -0.59
ACTN1-216ENST00000556083 SPON1Q9HCB6 807 aa11.34□□□□□ -0.59
ACTN1-216ENST00000556083 RAVER2Q9HCJ3 691 aaKnown RBP11.34□□□□□ -0.59
ACTN1-216ENST00000556083 SRP68Q9UHB9 627 aaKnown RBP11.34□□□□□ -0.59
ACTN1-216ENST00000556083 NCOA3Q9Y6Q9 1424 aa11.34□□□□□ -0.59
ACTN1-216ENST00000556083 GSG1L2A8MUP6 293 aa11.34□□□□□ -0.59
ACTN1-216ENST00000556083 MMEP08473 750 aa11.34□□□□□ -0.59
ACTN1-216ENST00000556083 RALBP11234 206 aa11.34□□□□□ -0.59
ACTN1-216ENST00000556083 EEF1DP29692 281 aaKnown RBP11.34□□□□□ -0.59
ACTN1-216ENST00000556083 C2orf54Q08AI8 447 aa11.34□□□□□ -0.59
ACTN1-216ENST00000556083 ZNF543Q08ER8 600 aa11.34□□□□□ -0.59
ACTN1-216ENST00000556083 SWSAP1Q6NVH7 229 aa11.34□□□□□ -0.59
ACTN1-216ENST00000556083 YAF2Q8IY57 180 aa11.34□□□□□ -0.59
ACTN1-216ENST00000556083 SMYD4Q8IYR2 804 aaPredicted RBP11.34□□□□□ -0.59
ACTN1-216ENST00000556083 ADGRF4Q8IZF3 695 aa11.34□□□□□ -0.59
ACTN1-216ENST00000556083 TRIML2Q8N7C3 387 aa11.34□□□□□ -0.59
ACTN1-216ENST00000556083 AGBL3Q8NEM8 1001 aa11.34□□□□□ -0.59
ACTN1-216ENST00000556083 PPHLN1Q8NEY8 458 aaKnown RBP11.34□□□□□ -0.59
ACTN1-216ENST00000556083 C18orf8Q96DM3 657 aa11.34□□□□□ -0.59
ACTN1-216ENST00000556083 DCUN1D1Q96GG9 259 aa11.34□□□□□ -0.59
ACTN1-216ENST00000556083 SGSM3Q96HU1 749 aa11.34□□□□□ -0.59
ACTN1-216ENST00000556083 GJD4Q96KN9 370 aaPredicted RBP11.34□□□□□ -0.59
ACTN1-216ENST00000556083 OLFM3Q96PB7 478 aa11.34□□□□□ -0.59
ACTN1-216ENST00000556083 NEUROG2Q9H2A3 272 aa11.34□□□□□ -0.59
ACTN1-216ENST00000556083 PIDD1Q9HB75 910 aa11.34□□□□□ -0.59
ACTN1-216ENST00000556083 DPP7Q9UHL4 492 aa11.34□□□□□ -0.59
ACTN1-216ENST00000556083 LRRC53A6NM62 1247 aa11.34□□□□□ -0.59
ACTN1-216ENST00000556083 AGTP01019 485 aa11.34□□□□□ -0.59
ACTN1-216ENST00000556083 PRDX5P30044 214 aa11.34□□□□□ -0.59
ACTN1-216ENST00000556083 GCLMP48507 274 aa11.34□□□□□ -0.59
ACTN1-216ENST00000556083 AP2B1P63010 937 aa11.34□□□□□ -0.59
ACTN1-216ENST00000556083 GRIN1Q05586 938 aa11.34□□□□□ -0.59
ACTN1-216ENST00000556083 SV2CQ496J9 727 aa11.34□□□□□ -0.59
ACTN1-216ENST00000556083 TRIM68Q6AZZ1 485 aa11.34□□□□□ -0.59
ACTN1-216ENST00000556083 BARGINQ6ZT62 677 aa11.34□□□□□ -0.59
ACTN1-216ENST00000556083 TBC1D10CQ8IV04 446 aa11.34□□□□□ -0.59
ACTN1-216ENST00000556083 AAASQ9NRG9 546 aa11.34□□□□□ -0.59
ACTN1-216ENST00000556083 LMTK2Q8IWU2 1503 aa11.34□□□□□ -0.59
ACTN1-216ENST00000556083 A0A1W2PQJ5 194 aa11.33□□□□□ -0.59
ACTN1-216ENST00000556083 SLC16A4O15374 487 aa11.33□□□□□ -0.59
ACTN1-216ENST00000556083 HBP1O60381 514 aa11.33□□□□□ -0.59
ACTN1-216ENST00000556083 HIST1H2AGP0C0S8 130 aaPredicted RBP11.33□□□□□ -0.59
ACTN1-216ENST00000556083 KRT4P19013 534 aa11.33□□□□□ -0.59
ACTN1-216ENST00000556083 HIST1H2ADP20671 130 aa11.33□□□□□ -0.59
ACTN1-216ENST00000556083 PRCPP42785 496 aa11.33□□□□□ -0.59
ACTN1-216ENST00000556083 PPP2R2AP63151 447 aa11.33□□□□□ -0.59
ACTN1-216ENST00000556083 SCARA5Q6ZMJ2 495 aa11.33□□□□□ -0.59
ACTN1-216ENST00000556083 ARHGEF1Q92888 912 aaKnown RBP11.33□□□□□ -0.59
ACTN1-216ENST00000556083 HIST1H2AHQ96KK5 128 aa11.33□□□□□ -0.59
ACTN1-216ENST00000556083 HIST1H2AJQ99878 128 aa11.33□□□□□ -0.59
ACTN1-216ENST00000556083 H2AFJQ9BTM1 129 aa11.33□□□□□ -0.59
ACTN1-216ENST00000556083 ROPN1BQ9BZX4 212 aaPredicted RBP11.33□□□□□ -0.59
ACTN1-216ENST00000556083 VPS33BQ9H267 617 aa11.33□□□□□ -0.59
ACTN1-216ENST00000556083 ROPN1Q9HAT0 212 aaPredicted RBP11.33□□□□□ -0.59
ACTN1-216ENST00000556083 ZFYVE28Q9HCC9 887 aa11.33□□□□□ -0.59
ACTN1-216ENST00000556083 KBTBD13C9JR72 458 aa11.33□□□□□ -0.6
ACTN1-216ENST00000556083 ESRRBO95718 433 aa11.33□□□□□ -0.6
ACTN1-216ENST00000556083 PRKCBP05771 671 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms