RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 FSCN1Q16658 493 aaKnown RBP6.98□□□□□ -1.29
VRK1-205ENST00000555402 UGT8Q16880 541 aa6.98□□□□□ -1.29
VRK1-205ENST00000555402 CCDC62Q6P9F0 684 aa6.98□□□□□ -1.29
VRK1-205ENST00000555402 TPH2Q8IWU9 490 aa6.98□□□□□ -1.29
VRK1-205ENST00000555402 CCDC146Q8IYE0 955 aa6.98□□□□□ -1.29
VRK1-205ENST00000555402 RABGGTAQ92696 567 aa6.98□□□□□ -1.29
VRK1-205ENST00000555402 EAF2Q96CJ1 260 aaPredicted RBP6.98□□□□□ -1.29
VRK1-205ENST00000555402 MYL10Q9BUA6 226 aa6.98□□□□□ -1.29
VRK1-205ENST00000555402 QRSL1Q9H0R6 528 aaKnown RBP6.98□□□□□ -1.29
VRK1-205ENST00000555402 OR10A5Q9H207 317 aa6.98□□□□□ -1.29
VRK1-205ENST00000555402 EDARQ9UNE0 448 aa6.98□□□□□ -1.29
VRK1-205ENST00000555402 ST20-MTHFSA0A0A6YYL1 179 aa6.97□□□□□ -1.29
VRK1-205ENST00000555402 A0A1W2PRX2 142 aa6.97□□□□□ -1.29
VRK1-205ENST00000555402 PCDHGA12O60330 932 aa6.97□□□□□ -1.29
VRK1-205ENST00000555402 U2AF1L5P0DN76 240 aaPredicted RBP6.97□□□□□ -1.29
VRK1-205ENST00000555402 KRT85P78386 507 aa6.97□□□□□ -1.29
VRK1-205ENST00000555402 U2AF1Q01081 240 aaKnown RBP eCLIP6.97□□□□□ -1.29
VRK1-205ENST00000555402 ROM1Q03395 351 aa6.97□□□□□ -1.29
VRK1-205ENST00000555402 TOR2AQ5JU69 321 aa6.97□□□□□ -1.29
VRK1-205ENST00000555402 GRAMD4Q6IC98 578 aa6.97□□□□□ -1.29
VRK1-205ENST00000555402 RTN4RL1Q86UN2 441 aaPredicted RBP6.97□□□□□ -1.29
VRK1-205ENST00000555402 TCEAL8Q8IYN2 117 aa6.97□□□□□ -1.29
VRK1-205ENST00000555402 TTC8Q8TAM2 541 aa6.97□□□□□ -1.29
VRK1-205ENST00000555402 FOXRED1Q96CU9 486 aaPredicted RBP6.97□□□□□ -1.29
VRK1-205ENST00000555402 ZNF764Q96H86 408 aaPredicted RBP6.97□□□□□ -1.29
VRK1-205ENST00000555402 PTGFRNQ9P2B2 879 aa6.97□□□□□ -1.29
VRK1-205ENST00000555402 PCDHGA9Q9Y5G4 932 aaKnown RBP6.97□□□□□ -1.29
VRK1-205ENST00000555402 PCDHGA8Q9Y5G5 932 aa6.97□□□□□ -1.29
VRK1-205ENST00000555402 PCDHGA7Q9Y5G6 932 aa6.97□□□□□ -1.29
VRK1-205ENST00000555402 PCDHGA6Q9Y5G7 932 aa6.97□□□□□ -1.29
VRK1-205ENST00000555402 PCDHGA3Q9Y5H0 932 aa6.97□□□□□ -1.29
VRK1-205ENST00000555402 PCDHGA2Q9Y5H1 932 aa6.97□□□□□ -1.29
VRK1-205ENST00000555402 CCDC194A0A1B0GVG4 234 aa6.96□□□□□ -1.3
VRK1-205ENST00000555402 PRPF3O43395 683 aaKnown RBP6.96□□□□□ -1.3
VRK1-205ENST00000555402 MAN2A2P49641 1150 aa6.96□□□□□ -1.3
VRK1-205ENST00000555402 MANFP55145 182 aaKnown RBP6.96□□□□□ -1.3
VRK1-205ENST00000555402 SRSF2Q01130 221 aaKnown RBP6.96□□□□□ -1.3
VRK1-205ENST00000555402 TMEM240Q5SV17 173 aa6.96□□□□□ -1.3
VRK1-205ENST00000555402 NXNQ6DKJ4 435 aa6.96□□□□□ -1.3
VRK1-205ENST00000555402 SLFN12LQ6IEE8 588 aa6.96□□□□□ -1.3
VRK1-205ENST00000555402 GSPT2Q8IYD1 628 aaKnown RBP6.96□□□□□ -1.3
VRK1-205ENST00000555402 MAGEB6Q8N7X4 407 aa6.96□□□□□ -1.3
VRK1-205ENST00000555402 CALML6Q8TD86 181 aa6.96□□□□□ -1.3
VRK1-205ENST00000555402 HSPBAP1Q96EW2 488 aa6.96□□□□□ -1.3
VRK1-205ENST00000555402 MAML3Q96JK9 1138 aa6.96□□□□□ -1.3
VRK1-205ENST00000555402 TCF7L1Q9HCS4 588 aa6.96□□□□□ -1.3
VRK1-205ENST00000555402 PNMA8BQ9ULN7 279 aaPredicted RBP6.96□□□□□ -1.3
VRK1-205ENST00000555402 PPP2R3BQ9Y5P8 575 aa6.96□□□□□ -1.3
VRK1-205ENST00000555402 PRSS38A1L453 326 aa6.95□□□□□ -1.3
VRK1-205ENST00000555402 ELL2O00472 640 aaPredicted RBP6.95□□□□□ -1.3
VRK1-205ENST00000555402 PRLP01236 227 aa6.95□□□□□ -1.3
VRK1-205ENST00000555402 LPLP06858 475 aa6.95□□□□□ -1.3
VRK1-205ENST00000555402 OSMP13725 252 aa6.95□□□□□ -1.3
VRK1-205ENST00000555402 ALDH6A1Q02252 535 aaKnown RBP6.95□□□□□ -1.3
VRK1-205ENST00000555402 ADCY2Q08462 1091 aa6.95□□□□□ -1.3
VRK1-205ENST00000555402 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.95□□□□□ -1.3
VRK1-205ENST00000555402 GFOD2Q3B7J2 385 aa6.95□□□□□ -1.3
VRK1-205ENST00000555402 CXorf57Q6NSI4 855 aaKnown RBP6.95□□□□□ -1.3
VRK1-205ENST00000555402 VRK3Q8IV63 474 aa6.95□□□□□ -1.3
VRK1-205ENST00000555402 CCAR1Q8IX12 1150 aaKnown RBP6.95□□□□□ -1.3
VRK1-205ENST00000555402 CMTR2Q8IYT2 770 aaKnown RBP6.95□□□□□ -1.3
VRK1-205ENST00000555402 NTN5Q8WTR8 489 aaPredicted RBP6.95□□□□□ -1.3
VRK1-205ENST00000555402 TEKT5Q96M29 485 aa6.95□□□□□ -1.3
VRK1-205ENST00000555402 ORAI2Q96SN7 254 aa6.95□□□□□ -1.3
VRK1-205ENST00000555402 FOXB1Q99853 325 aa6.95□□□□□ -1.3
VRK1-205ENST00000555402 PCGF6Q9BYE7 350 aa6.95□□□□□ -1.3
VRK1-205ENST00000555402 RIOX1Q9H6W3 641 aa6.95□□□□□ -1.3
VRK1-205ENST00000555402 PACSIN3Q9UKS6 424 aa6.95□□□□□ -1.3
VRK1-205ENST00000555402 CTDP1Q9Y5B0 961 aaPredicted RBP6.95□□□□□ -1.3
VRK1-205ENST00000555402 GPR45Q9Y5Y3 372 aa6.95□□□□□ -1.3
VRK1-205ENST00000555402 XDHP47989 1333 aa6.95□□□□□ -1.3
VRK1-205ENST00000555402 MASP2O00187 686 aa6.94□□□□□ -1.3
VRK1-205ENST00000555402 CAND2O75155 1236 aa6.94□□□□□ -1.3
VRK1-205ENST00000555402 MAP4K4O95819 1239 aaPredicted RBP6.94□□□□□ -1.3
VRK1-205ENST00000555402 MTHFD2P13995 350 aa6.94□□□□□ -1.3
VRK1-205ENST00000555402 VCAM1P19320 739 aa6.94□□□□□ -1.3
VRK1-205ENST00000555402 CYP2C19P33261 490 aa6.94□□□□□ -1.3
VRK1-205ENST00000555402 GNALP38405 381 aa6.94□□□□□ -1.3
VRK1-205ENST00000555402 RGS3P49796 1198 aa6.94□□□□□ -1.3
VRK1-205ENST00000555402 ATP2C1P98194 919 aaPredicted RBP6.94□□□□□ -1.3
VRK1-205ENST00000555402 ADAM15Q13444 863 aa6.94□□□□□ -1.3
VRK1-205ENST00000555402 PITRM1Q5JRX3 1037 aa6.94□□□□□ -1.3
VRK1-205ENST00000555402 ZBTB41Q5SVQ8 909 aa6.94□□□□□ -1.3
VRK1-205ENST00000555402 SLC4A10Q6U841 1118 aa6.94□□□□□ -1.3
VRK1-205ENST00000555402 PRIMA1Q86XR5 153 aa6.94□□□□□ -1.3
VRK1-205ENST00000555402 SLC25A43Q8WUT9 341 aaPredicted RBP6.94□□□□□ -1.3
VRK1-205ENST00000555402 JADE3Q92613 823 aa6.94□□□□□ -1.3
VRK1-205ENST00000555402 RPGRQ92834 1020 aaKnown RBP6.94□□□□□ -1.3
VRK1-205ENST00000555402 RAX2Q96IS3 184 aa6.94□□□□□ -1.3
VRK1-205ENST00000555402 LRGUKQ96M69 825 aa6.94□□□□□ -1.3
VRK1-205ENST00000555402 SLC2A13Q96QE2 648 aa6.94□□□□□ -1.3
VRK1-205ENST00000555402 ZNHIT2Q9UHR6 403 aa6.94□□□□□ -1.3
VRK1-205ENST00000555402 FAM20BO75063 409 aa6.93□□□□□ -1.3
VRK1-205ENST00000555402 KRT18P05783 430 aaKnown RBP6.93□□□□□ -1.3
VRK1-205ENST00000555402 ADCY7P51828 1080 aa6.93□□□□□ -1.3
VRK1-205ENST00000555402 MYBPC3Q14896 1274 aa6.93□□□□□ -1.3
VRK1-205ENST00000555402 ACAP1Q15027 740 aa6.93□□□□□ -1.3
VRK1-205ENST00000555402 MINDY4Q4G0A6 757 aa6.93□□□□□ -1.3
VRK1-205ENST00000555402 KIAA1841Q6NSI8 718 aa6.93□□□□□ -1.3
VRK1-205ENST00000555402 UNQ6494/PRO21346Q6UXR6 183 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms