RNA–Protein interactions for RNA: ENST00000554975.5

SHMT2-216, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 780 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-216ENST00000554975 CTNND2Q9UQB3 1225 aa12.24□□□□□ -0.45
SHMT2-216ENST00000554975 NR2E1Q9Y466 385 aa12.24□□□□□ -0.45
SHMT2-216ENST00000554975 TRPV2Q9Y5S1 764 aa12.24□□□□□ -0.45
SHMT2-216ENST00000554975 DOCK8Q8NF50 2099 aa12.23□□□□□ -0.45
SHMT2-216ENST00000554975 CHD8Q9HCK8 2581 aa12.23□□□□□ -0.45
SHMT2-216ENST00000554975 A0A087X0B3 334 aa12.23□□□□□ -0.45
SHMT2-216ENST00000554975 SMCO2A6NFE2 343 aa12.23□□□□□ -0.45
SHMT2-216ENST00000554975 AKR1B15C9JRZ8 316 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-216ENST00000554975 STAM2O75886 525 aa12.23□□□□□ -0.45
SHMT2-216ENST00000554975 EEF1GP26641 437 aaKnown RBP12.23□□□□□ -0.45
SHMT2-216ENST00000554975 PBX3P40426 434 aa12.23□□□□□ -0.45
SHMT2-216ENST00000554975 PAK2Q13177 524 aa12.23□□□□□ -0.45
SHMT2-216ENST00000554975 ARID5BQ14865 1188 aa12.23□□□□□ -0.45
SHMT2-216ENST00000554975 INF2Q27J81 1249 aa12.23□□□□□ -0.45
SHMT2-216ENST00000554975 PCNX4Q63HM2 1172 aa12.23□□□□□ -0.45
SHMT2-216ENST00000554975 E4F1Q66K89 784 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-216ENST00000554975 CCDC105Q8IYK2 499 aa12.23□□□□□ -0.45
SHMT2-216ENST00000554975 GRAMD1CQ8IYS0 662 aa12.23□□□□□ -0.45
SHMT2-216ENST00000554975 PCYT2Q99447 389 aa12.23□□□□□ -0.45
SHMT2-216ENST00000554975 BAG1Q99933 345 aaPredicted RBP12.23□□□□□ -0.45
SHMT2-216ENST00000554975 TCF25Q9BQ70 676 aa12.23□□□□□ -0.45
SHMT2-216ENST00000554975 LIMD1Q9UGP4 676 aa12.23□□□□□ -0.45
SHMT2-216ENST00000554975 LIMA1Q9UHB6 759 aaKnown RBP12.23□□□□□ -0.45
SHMT2-216ENST00000554975 KDM3AQ9Y4C1 1321 aa12.22□□□□□ -0.45
SHMT2-216ENST00000554975 SLU7O95391 586 aaKnown RBP12.22□□□□□ -0.45
SHMT2-216ENST00000554975 SRGAP2BP0DMP2 458 aa12.22□□□□□ -0.45
SHMT2-216ENST00000554975 FGFR1P11362 822 aa12.22□□□□□ -0.45
SHMT2-216ENST00000554975 INSRRP14616 1297 aa12.22□□□□□ -0.45
SHMT2-216ENST00000554975 KCNA2P16389 499 aa12.22□□□□□ -0.45
SHMT2-216ENST00000554975 HOXB8P17481 243 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-216ENST00000554975 AOC1P19801 751 aa12.22□□□□□ -0.45
SHMT2-216ENST00000554975 ETF1P62495 437 aaKnown RBP12.22□□□□□ -0.45
SHMT2-216ENST00000554975 COBLL1Q53SF7 1204 aa12.22□□□□□ -0.45
SHMT2-216ENST00000554975 KLHL10Q6JEL2 608 aa12.22□□□□□ -0.45
SHMT2-216ENST00000554975 PDE12Q6L8Q7 609 aaKnown RBP12.22□□□□□ -0.45
SHMT2-216ENST00000554975 TYW1BQ6NUM6 668 aa12.22□□□□□ -0.45
SHMT2-216ENST00000554975 XRRA1Q6P2D8 792 aa12.22□□□□□ -0.45
SHMT2-216ENST00000554975 NLRX1Q86UT6 975 aa12.22□□□□□ -0.45
SHMT2-216ENST00000554975 CABP7Q86V35 215 aa12.22□□□□□ -0.45
SHMT2-216ENST00000554975 C12orf76Q8N812 135 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-216ENST00000554975 C4orf32Q8N8J7 132 aa12.22□□□□□ -0.45
SHMT2-216ENST00000554975 TMEM40Q8WWA1 233 aa12.22□□□□□ -0.45
SHMT2-216ENST00000554975 ANKRD7Q92527 254 aa12.22□□□□□ -0.45
SHMT2-216ENST00000554975 SENP7Q9BQF6 1050 aa12.22□□□□□ -0.45
SHMT2-216ENST00000554975 CELF4Q9BZC1 486 aaKnown RBP12.22□□□□□ -0.45
SHMT2-216ENST00000554975 ADAM7Q9H2U9 754 aa12.22□□□□□ -0.45
SHMT2-216ENST00000554975 CDHR5Q9HBB8 845 aa12.22□□□□□ -0.45
SHMT2-216ENST00000554975 RIC8AQ9NPQ8 531 aa12.22□□□□□ -0.45
SHMT2-216ENST00000554975 ENTPD7Q9NQZ7 604 aa12.22□□□□□ -0.45
SHMT2-216ENST00000554975 AAASQ9NRG9 546 aa12.22□□□□□ -0.45
SHMT2-216ENST00000554975 EXOC1Q9NV70 894 aa12.22□□□□□ -0.45
SHMT2-216ENST00000554975 PKD2L1Q9P0L9 805 aa12.22□□□□□ -0.45
SHMT2-216ENST00000554975 MAGEC2Q9UBF1 373 aaPredicted RBP12.22□□□□□ -0.45
SHMT2-216ENST00000554975 HCFC2Q9Y5Z7 792 aa12.22□□□□□ -0.45
SHMT2-216ENST00000554975 SQORQ9Y6N5 450 aa12.22□□□□□ -0.45
SHMT2-216ENST00000554975 R4GN57 208 aa12.22□□□□□ -0.45
SHMT2-216ENST00000554975 CHD6Q8TD26 2715 aa12.22□□□□□ -0.45
SHMT2-216ENST00000554975 USP24Q9UPU5 2620 aa12.22□□□□□ -0.45
SHMT2-216ENST00000554975 PPP1R3GB7ZBB8 358 aa12.21□□□□□ -0.45
SHMT2-216ENST00000554975 C9IYK1 514 aa12.21□□□□□ -0.45
SHMT2-216ENST00000554975 WNT7AO00755 349 aa12.21□□□□□ -0.45
SHMT2-216ENST00000554975 RHOBTB3O94955 611 aa12.21□□□□□ -0.45
SHMT2-216ENST00000554975 CCDC175P0C221 793 aa12.21□□□□□ -0.45
SHMT2-216ENST00000554975 NFX1Q12986 1120 aaKnown RBP12.21□□□□□ -0.45
SHMT2-216ENST00000554975 NR1I3Q14994 352 aa12.21□□□□□ -0.45
SHMT2-216ENST00000554975 IER5Q5VY09 327 aa12.21□□□□□ -0.45
SHMT2-216ENST00000554975 CNNM4Q6P4Q7 775 aa12.21□□□□□ -0.45
SHMT2-216ENST00000554975 LRRC55Q6ZSA7 311 aa12.21□□□□□ -0.45
SHMT2-216ENST00000554975 TDRD5Q8NAT2 981 aaKnown RBP12.21□□□□□ -0.45
SHMT2-216ENST00000554975 DTWD2Q8NBA8 298 aa12.21□□□□□ -0.45
SHMT2-216ENST00000554975 ZNF592Q92610 1267 aa12.21□□□□□ -0.45
SHMT2-216ENST00000554975 DHTKD1Q96HY7 919 aaPredicted RBP12.21□□□□□ -0.45
SHMT2-216ENST00000554975 CDK5RAP3Q96JB5 506 aa12.21□□□□□ -0.45
SHMT2-216ENST00000554975 ANO3Q9BYT9 981 aa12.21□□□□□ -0.45
SHMT2-216ENST00000554975 THAP9Q9H5L6 903 aa12.21□□□□□ -0.45
SHMT2-216ENST00000554975 L2HGDHQ9H9P8 463 aa12.21□□□□□ -0.45
SHMT2-216ENST00000554975 ERVK-5Q9HDB9 667 aa12.21□□□□□ -0.45
SHMT2-216ENST00000554975 RNF19AQ9NV58 838 aa12.21□□□□□ -0.45
SHMT2-216ENST00000554975 KBTBD4Q9NVX7 518 aa12.21□□□□□ -0.45
SHMT2-216ENST00000554975 ERAP1Q9NZ08 941 aa12.21□□□□□ -0.45
SHMT2-216ENST00000554975 DNAI1Q9UI46 699 aa12.21□□□□□ -0.45
SHMT2-216ENST00000554975 LZTS1Q9Y250 596 aa12.21□□□□□ -0.45
SHMT2-216ENST00000554975 NOC2LQ9Y3T9 749 aaKnown RBP12.21□□□□□ -0.45
SHMT2-216ENST00000554975 PCDHB7Q9Y5E2 793 aa12.21□□□□□ -0.45
SHMT2-216ENST00000554975 STK24Q9Y6E0 443 aa12.21□□□□□ -0.45
SHMT2-216ENST00000554975 MFAP3LO75121 409 aa12.2□□□□□ -0.46
SHMT2-216ENST00000554975 FGFR1OPO95684 399 aaKnown RBP12.2□□□□□ -0.46
SHMT2-216ENST00000554975 FOSP01100 380 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-216ENST00000554975 LMNAP02545 664 aaKnown RBP12.2□□□□□ -0.46
SHMT2-216ENST00000554975 FECHP22830 423 aa12.2□□□□□ -0.46
SHMT2-216ENST00000554975 ZNF76P36508 570 aa12.2□□□□□ -0.46
SHMT2-216ENST00000554975 FXR2P51116 673 aaKnown RBP eCLIP12.2□□□□□ -0.46
SHMT2-216ENST00000554975 PLCB3Q01970 1234 aa12.2□□□□□ -0.46
SHMT2-216ENST00000554975 TUBB2AQ13885 445 aa12.2□□□□□ -0.46
SHMT2-216ENST00000554975 KARSQ15046 597 aaKnown RBP12.2□□□□□ -0.46
SHMT2-216ENST00000554975 LETM2Q2VYF4 491 aa12.2□□□□□ -0.46
SHMT2-216ENST00000554975 RARS2Q5T160 578 aaKnown RBP12.2□□□□□ -0.46
SHMT2-216ENST00000554975 JAKMIP3Q5VZ66 844 aa12.2□□□□□ -0.46
SHMT2-216ENST00000554975 FOXR2Q6PJQ5 311 aa12.2□□□□□ -0.46
SHMT2-216ENST00000554975 ZDHHC14Q8IZN3 488 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms