RNA–Protein interactions for RNA: ENST00000554803.5

SRP54-205, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-205ENST00000554803 ADCY7P51828 1080 aa12.14□□□□□ -0.47
SRP54-205ENST00000554803 TBC1D8BQ0IIM8 1120 aa12.14□□□□□ -0.47
SRP54-205ENST00000554803 PDIA5Q14554 519 aa12.14□□□□□ -0.47
SRP54-205ENST00000554803 IL17AQ16552 155 aa12.14□□□□□ -0.47
SRP54-205ENST00000554803 UBE2SQ16763 222 aa12.14□□□□□ -0.47
SRP54-205ENST00000554803 TMEM266Q2M3C6 531 aa12.14□□□□□ -0.47
SRP54-205ENST00000554803 TRIM71Q2Q1W2 868 aaKnown RBP12.14□□□□□ -0.47
SRP54-205ENST00000554803 NAALADL2Q58DX5 795 aa12.14□□□□□ -0.47
SRP54-205ENST00000554803 CABP7Q86V35 215 aa12.14□□□□□ -0.47
SRP54-205ENST00000554803 GUF1Q8N442 669 aaKnown RBP12.14□□□□□ -0.47
SRP54-205ENST00000554803 COG1Q8WTW3 980 aa12.14□□□□□ -0.47
SRP54-205ENST00000554803 SECISBP2LQ93073 1101 aaKnown RBP12.14□□□□□ -0.47
SRP54-205ENST00000554803 MSLNLQ96KJ4 702 aa12.14□□□□□ -0.47
SRP54-205ENST00000554803 PNKPQ96T60 521 aa12.14□□□□□ -0.47
SRP54-205ENST00000554803 YME1L1Q96TA2 773 aa12.14□□□□□ -0.47
SRP54-205ENST00000554803 TRIM9Q9C026 710 aa12.14□□□□□ -0.47
SRP54-205ENST00000554803 BLZF1Q9H2G9 400 aa12.14□□□□□ -0.47
SRP54-205ENST00000554803 PDE11AQ9HCR9 933 aa12.14□□□□□ -0.47
SRP54-205ENST00000554803 ST7Q9NRC1 585 aa12.14□□□□□ -0.47
SRP54-205ENST00000554803 GTF2IRD1Q9UHL9 959 aa12.14□□□□□ -0.47
SRP54-205ENST00000554803 CCPG1Q9ULG6 757 aa12.14□□□□□ -0.47
SRP54-205ENST00000554803 PCDHA6Q9UN73 950 aa12.14□□□□□ -0.47
SRP54-205ENST00000554803 PLAGL2Q9UPG8 496 aa12.14□□□□□ -0.47
SRP54-205ENST00000554803 PCDHA8Q9Y5H6 950 aa12.14□□□□□ -0.47
SRP54-205ENST00000554803 SSU72P8A0A1W2PR75 194 aa12.13□□□□□ -0.47
SRP54-205ENST00000554803 B4DLN1 442 aa12.13□□□□□ -0.47
SRP54-205ENST00000554803 C5orf67F2Z3F1 127 aa12.13□□□□□ -0.47
SRP54-205ENST00000554803 LINC01565O15544 149 aa12.13□□□□□ -0.47
SRP54-205ENST00000554803 RGS20O76081 388 aa12.13□□□□□ -0.47
SRP54-205ENST00000554803 RB1P06400 928 aa12.13□□□□□ -0.47
SRP54-205ENST00000554803 ANXA13P27216 316 aa12.13□□□□□ -0.47
SRP54-205ENST00000554803 FXR2P51116 673 aaKnown RBP eCLIP12.13□□□□□ -0.472e-6■□□□□ 8.3
SRP54-205ENST00000554803 MRPL12P52815 198 aaKnown RBP12.13□□□□□ -0.47
SRP54-205ENST00000554803 VSNL1P62760 191 aa12.13□□□□□ -0.47
SRP54-205ENST00000554803 PTK7Q13308 1070 aa12.13□□□□□ -0.47
SRP54-205ENST00000554803 ADAM15Q13444 863 aa12.13□□□□□ -0.47
SRP54-205ENST00000554803 ZNF618Q5T7W0 954 aa12.13□□□□□ -0.47
SRP54-205ENST00000554803 MCTP2Q6DN12 878 aa12.13□□□□□ -0.47
SRP54-205ENST00000554803 CENPPQ6IPU0 288 aa12.13□□□□□ -0.47
SRP54-205ENST00000554803 NEK8Q86SG6 692 aa12.13□□□□□ -0.47
SRP54-205ENST00000554803 SMYD4Q8IYR2 804 aaPredicted RBP12.13□□□□□ -0.47
SRP54-205ENST00000554803 EIF1ADQ8N9N8 165 aaKnown RBP12.13□□□□□ -0.47
SRP54-205ENST00000554803 DBF4BQ8NFT6 615 aa12.13□□□□□ -0.47
SRP54-205ENST00000554803 SCFD2Q8WU76 684 aa12.13□□□□□ -0.47
SRP54-205ENST00000554803 TBC1D5Q92609 795 aa12.13□□□□□ -0.47
SRP54-205ENST00000554803 KAT2BQ92831 832 aa12.13□□□□□ -0.47
SRP54-205ENST00000554803 TOP1MTQ969P6 601 aa12.13□□□□□ -0.47
SRP54-205ENST00000554803 CCDC42Q96M95 316 aa12.13□□□□□ -0.47
SRP54-205ENST00000554803 TSG101Q99816 390 aa12.13□□□□□ -0.47
SRP54-205ENST00000554803 CRACR2AQ9BSW2 395 aa12.13□□□□□ -0.47
SRP54-205ENST00000554803 IRX2Q9BZI1 471 aaPredicted RBP12.13□□□□□ -0.47
SRP54-205ENST00000554803 VPS18Q9P253 973 aa12.13□□□□□ -0.47
SRP54-205ENST00000554803 GUCA1BQ9UMX6 200 aa12.13□□□□□ -0.47
SRP54-205ENST00000554803 STK24Q9Y6E0 443 aa12.13□□□□□ -0.47
SRP54-205ENST00000554803 CHD8Q9HCK8 2581 aa12.13□□□□□ -0.47
SRP54-205ENST00000554803 EMSYQ7Z589 1322 aa12.12□□□□□ -0.47
SRP54-205ENST00000554803 ZFHX4Q86UP3 3567 aa12.12□□□□□ -0.47
SRP54-205ENST00000554803 KAT6AQ92794 2004 aa12.12□□□□□ -0.47
SRP54-205ENST00000554803 MED19A0JLT2 244 aaPredicted RBP12.12□□□□□ -0.47
SRP54-205ENST00000554803 PJA2O43164 708 aa12.12□□□□□ -0.47
SRP54-205ENST00000554803 OPA1O60313 960 aa12.12□□□□□ -0.47
SRP54-205ENST00000554803 MMP3P08254 477 aa12.12□□□□□ -0.47
SRP54-205ENST00000554803 TXNP10599 105 aaKnown RBP12.12□□□□□ -0.47
SRP54-205ENST00000554803 MTIF2P46199 727 aaKnown RBP12.12□□□□□ -0.47
SRP54-205ENST00000554803 LMAN1P49257 510 aa12.12□□□□□ -0.47
SRP54-205ENST00000554803 PDE4DQ08499 809 aa12.12□□□□□ -0.47
SRP54-205ENST00000554803 BAATQ14032 418 aaPredicted RBP12.12□□□□□ -0.47
SRP54-205ENST00000554803 MCM6Q14566 821 aa12.12□□□□□ -0.47
SRP54-205ENST00000554803 MAN2A1Q16706 1144 aa12.12□□□□□ -0.47
SRP54-205ENST00000554803 EMBQ6PCB8 327 aa12.12□□□□□ -0.47
SRP54-205ENST00000554803 WDR59Q6PJI9 974 aa12.12□□□□□ -0.47
SRP54-205ENST00000554803 UNC13DQ70J99 1090 aa12.12□□□□□ -0.47
SRP54-205ENST00000554803 SV2BQ7L1I2 683 aa12.12□□□□□ -0.47
SRP54-205ENST00000554803 KCTD17Q8N5Z5 321 aa12.12□□□□□ -0.47
SRP54-205ENST00000554803 SMRP1Q8NCR6 262 aa12.12□□□□□ -0.47
SRP54-205ENST00000554803 CLEC4DQ8WXI8 215 aa12.12□□□□□ -0.47
SRP54-205ENST00000554803 WNT8BQ93098 351 aa12.12□□□□□ -0.47
SRP54-205ENST00000554803 CNOT6LQ96LI5 555 aaKnown RBP12.12□□□□□ -0.47
SRP54-205ENST00000554803 NHEJ1Q9H9Q4 299 aaPredicted RBP12.12□□□□□ -0.47
SRP54-205ENST00000554803 REXO2Q9Y3B8 237 aaKnown RBP12.12□□□□□ -0.47
SRP54-205ENST00000554803 TTC3P53804 2025 aa12.11□□□□□ -0.47
SRP54-205ENST00000554803 PLXNA4Q9HCM2 1894 aa12.11□□□□□ -0.47
SRP54-205ENST00000554803 GOLGA8KD6RF30 607 aa12.11□□□□□ -0.47
SRP54-205ENST00000554803 H3BQF6 201 aa12.11□□□□□ -0.47
SRP54-205ENST00000554803 NFIBO00712 420 aa12.11□□□□□ -0.47
SRP54-205ENST00000554803 CES2O00748 559 aa12.11□□□□□ -0.47
SRP54-205ENST00000554803 WNT7AO00755 349 aa12.11□□□□□ -0.47
SRP54-205ENST00000554803 MEIS2O14770 477 aa12.11□□□□□ -0.47
SRP54-205ENST00000554803 GRM6O15303 877 aa12.11□□□□□ -0.47
SRP54-205ENST00000554803 GCFC2P16383 781 aaKnown RBP12.11□□□□□ -0.47
SRP54-205ENST00000554803 EDNRBP24530 442 aa12.11□□□□□ -0.47
SRP54-205ENST00000554803 ICAM3P32942 547 aa12.11□□□□□ -0.47
SRP54-205ENST00000554803 CTNNB1P35222 781 aa12.11□□□□□ -0.47
SRP54-205ENST00000554803 CLK2P49760 499 aaKnown RBP12.11□□□□□ -0.47
SRP54-205ENST00000554803 NDUFV1P49821 464 aa12.11□□□□□ -0.47
SRP54-205ENST00000554803 RAD51AP2Q09MP3 1159 aa12.11□□□□□ -0.47
SRP54-205ENST00000554803 MAPK8IP2Q13387 824 aaPredicted RBP12.11□□□□□ -0.47
SRP54-205ENST00000554803 PLEKHG4Q58EX7 1191 aa12.11□□□□□ -0.47
SRP54-205ENST00000554803 C10orf76Q5T2E6 689 aa12.11□□□□□ -0.47
SRP54-205ENST00000554803 ALS2CLQ60I27 953 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms