RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 CDR2LQ86X02 465 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-215ENST00000554656 DIS3L2Q8IYB7 885 aaKnown RBP11.74□□□□□ -0.53
SHMT2-215ENST00000554656 GSTCDQ8NEC7 633 aa11.74□□□□□ -0.53
SHMT2-215ENST00000554656 PIGOQ8TEQ8 1089 aa11.74□□□□□ -0.53
SHMT2-215ENST00000554656 WASF1Q92558 559 aa11.74□□□□□ -0.53
SHMT2-215ENST00000554656 CCDC51Q96ER9 411 aa11.74□□□□□ -0.53
SHMT2-215ENST00000554656 APOL6Q9BWW8 343 aa11.74□□□□□ -0.53
SHMT2-215ENST00000554656 CSRNP2Q9H175 543 aa11.74□□□□□ -0.53
SHMT2-215ENST00000554656 TTC12Q9H892 705 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-215ENST00000554656 GPRC5CQ9NQ84 441 aa11.74□□□□□ -0.53
SHMT2-215ENST00000554656 ANKEF1Q9NU02 776 aa11.74□□□□□ -0.53
SHMT2-215ENST00000554656 KANSL3Q9P2N6 904 aa11.74□□□□□ -0.53
SHMT2-215ENST00000554656 CACNG4Q9UBN1 327 aa11.74□□□□□ -0.53
SHMT2-215ENST00000554656 DBR1Q9UK59 544 aaKnown RBP11.74□□□□□ -0.53
SHMT2-215ENST00000554656 PCDHA12Q9UN75 941 aa11.74□□□□□ -0.53
SHMT2-215ENST00000554656 USTQ9Y2C2 406 aa11.74□□□□□ -0.53
SHMT2-215ENST00000554656 CFAP54Q96N23 3096 aa11.74□□□□□ -0.53
SHMT2-215ENST00000554656 ZFHX2Q9C0A1 2572 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-215ENST00000554656 VPS13AQ96RL7 3174 aa11.73□□□□□ -0.53
SHMT2-215ENST00000554656 TTLL13PA6NNM8 815 aa11.73□□□□□ -0.53
SHMT2-215ENST00000554656 INO80B-WBP1J3KQ70 363 aa11.73□□□□□ -0.53
SHMT2-215ENST00000554656 C2CD2LO14523 706 aa11.73□□□□□ -0.53
SHMT2-215ENST00000554656 TEX28O15482 410 aa11.73□□□□□ -0.53
SHMT2-215ENST00000554656 USO1O60763 962 aaKnown RBP11.73□□□□□ -0.53
SHMT2-215ENST00000554656 N4BP1O75113 896 aaKnown RBP11.73□□□□□ -0.53
SHMT2-215ENST00000554656 DGAT1O75907 488 aa11.73□□□□□ -0.53
SHMT2-215ENST00000554656 ALDH2P05091 517 aa11.73□□□□□ -0.53
SHMT2-215ENST00000554656 SPATA31C1P0DKV0 1188 aa11.73□□□□□ -0.53
SHMT2-215ENST00000554656 KLRC2P26717 231 aa11.73□□□□□ -0.53
SHMT2-215ENST00000554656 AXLP30530 894 aa11.73□□□□□ -0.53
SHMT2-215ENST00000554656 TXKP42681 527 aa11.73□□□□□ -0.53
SHMT2-215ENST00000554656 POU5F1BQ06416 359 aa11.73□□□□□ -0.53
SHMT2-215ENST00000554656 ATAT1Q5SQI0 421 aa11.73□□□□□ -0.53
SHMT2-215ENST00000554656 KIAA0319Q5VV43 1072 aa11.73□□□□□ -0.53
SHMT2-215ENST00000554656 NOTUMQ6P988 496 aa11.73□□□□□ -0.53
SHMT2-215ENST00000554656 PPFIBP1Q86W92 1011 aa11.73□□□□□ -0.53
SHMT2-215ENST00000554656 UBALD2Q8IYN6 164 aa11.73□□□□□ -0.53
SHMT2-215ENST00000554656 TMEM105Q8N8V8 129 aa11.73□□□□□ -0.53
SHMT2-215ENST00000554656 TMEM87AQ8NBN3 555 aa11.73□□□□□ -0.53
SHMT2-215ENST00000554656 CNNM3Q8NE01 707 aa11.73□□□□□ -0.53
SHMT2-215ENST00000554656 B3GALT6Q96L58 329 aa11.73□□□□□ -0.53
SHMT2-215ENST00000554656 FAM193BQ96PV7 902 aaPredicted RBP11.73□□□□□ -0.53
SHMT2-215ENST00000554656 RPS6KC1Q96S38 1066 aa11.73□□□□□ -0.53
SHMT2-215ENST00000554656 EMILIN2Q9BXX0 1053 aa11.73□□□□□ -0.53
SHMT2-215ENST00000554656 NFKBIZQ9BYH8 718 aa11.73□□□□□ -0.53
SHMT2-215ENST00000554656 POLR3FQ9H1D9 316 aaPredicted RBP11.73□□□□□ -0.53
SHMT2-215ENST00000554656 MAN1C1Q9NR34 630 aa11.73□□□□□ -0.53
SHMT2-215ENST00000554656 MRPL17Q9NRX2 175 aaKnown RBP11.73□□□□□ -0.53
SHMT2-215ENST00000554656 ZDHHC9Q9Y397 364 aa11.73□□□□□ -0.53
SHMT2-215ENST00000554656 ATP6V1DQ9Y5K8 247 aa11.73□□□□□ -0.53
SHMT2-215ENST00000554656 MYO15AQ9UKN7 3530 aa11.73□□□□□ -0.53
SHMT2-215ENST00000554656 GOLGA6L22H0YM25 854 aa11.72□□□□□ -0.53
SHMT2-215ENST00000554656 MED24O75448 989 aa11.72□□□□□ -0.53
SHMT2-215ENST00000554656 NPTXRO95502 500 aa11.72□□□□□ -0.53
SHMT2-215ENST00000554656 EDN1P05305 212 aa11.72□□□□□ -0.53
SHMT2-215ENST00000554656 URODP06132 367 aa11.72□□□□□ -0.53
SHMT2-215ENST00000554656 ZSCAN22P10073 491 aaPredicted RBP11.72□□□□□ -0.53
SHMT2-215ENST00000554656 MYBP10242 640 aa11.72□□□□□ -0.53
SHMT2-215ENST00000554656 AKAP5P24588 427 aa11.72□□□□□ -0.53
SHMT2-215ENST00000554656 MCM4P33991 863 aa11.72□□□□□ -0.53
SHMT2-215ENST00000554656 OR1G1P47890 313 aa11.72□□□□□ -0.53
SHMT2-215ENST00000554656 TFDP1Q14186 410 aa11.72□□□□□ -0.53
SHMT2-215ENST00000554656 PCBP1Q15365 356 aaKnown RBP eCLIP11.72□□□□□ -0.53
SHMT2-215ENST00000554656 LARP1BQ659C4 914 aaKnown RBP11.72□□□□□ -0.53
SHMT2-215ENST00000554656 FAM184AQ8NB25 1140 aa11.72□□□□□ -0.53
SHMT2-215ENST00000554656 BSNDQ8WZ55 320 aa11.72□□□□□ -0.53
SHMT2-215ENST00000554656 RABGGTAQ92696 567 aa11.72□□□□□ -0.53
SHMT2-215ENST00000554656 PRRX2Q99811 253 aa11.72□□□□□ -0.53
SHMT2-215ENST00000554656 GPR62Q9BZJ7 368 aa11.72□□□□□ -0.53
SHMT2-215ENST00000554656 CXCL16Q9H2A7 254 aa11.72□□□□□ -0.53
SHMT2-215ENST00000554656 RXFP1Q9HBX9 757 aa11.72□□□□□ -0.53
SHMT2-215ENST00000554656 BRMS1Q9HCU9 246 aa11.72□□□□□ -0.53
SHMT2-215ENST00000554656 UBN1Q9NPG3 1134 aa11.72□□□□□ -0.53
SHMT2-215ENST00000554656 RFPL2O75678 378 aa11.71□□□□□ -0.53
SHMT2-215ENST00000554656 GLUD2P49448 558 aa11.71□□□□□ -0.53
SHMT2-215ENST00000554656 GUCY1B3Q02153 619 aa11.71□□□□□ -0.53
SHMT2-215ENST00000554656 DSG1Q02413 1049 aa11.71□□□□□ -0.53
SHMT2-215ENST00000554656 CDCA2Q69YH5 1023 aaPredicted RBP11.71□□□□□ -0.53
SHMT2-215ENST00000554656 CWF19L1Q69YN2 538 aaKnown RBP11.71□□□□□ -0.53
SHMT2-215ENST00000554656 C15orf39Q6ZRI6 1047 aa11.71□□□□□ -0.53
SHMT2-215ENST00000554656 CCDC149Q6ZUS6 474 aa11.71□□□□□ -0.53
SHMT2-215ENST00000554656 MAEAQ7L5Y9 396 aa11.71□□□□□ -0.53
SHMT2-215ENST00000554656 CMASQ8NFW8 434 aaPredicted RBP11.71□□□□□ -0.53
SHMT2-215ENST00000554656 ZNF707Q96C28 371 aaPredicted RBP11.71□□□□□ -0.53
SHMT2-215ENST00000554656 PAAF1Q9BRP4 392 aa11.71□□□□□ -0.53
SHMT2-215ENST00000554656 CHST7Q9NS84 486 aa11.71□□□□□ -0.53
SHMT2-215ENST00000554656 KLK14Q9P0G3 267 aa11.71□□□□□ -0.53
SHMT2-215ENST00000554656 STK39Q9UEW8 545 aa11.71□□□□□ -0.53
SHMT2-215ENST00000554656 MTMR6Q9Y217 621 aa11.71□□□□□ -0.53
SHMT2-215ENST00000554656 GIT1Q9Y2X7 761 aa11.71□□□□□ -0.53
SHMT2-215ENST00000554656 NOTCH4Q99466 2003 aa11.7□□□□□ -0.54
SHMT2-215ENST00000554656 ZMYM2Q9UBW7 1377 aa11.7□□□□□ -0.54
SHMT2-215ENST00000554656 A0A1B0GUA9 196 aa11.7□□□□□ -0.54
SHMT2-215ENST00000554656 LRRIQ4A6NIV6 560 aa11.7□□□□□ -0.54
SHMT2-215ENST00000554656 H0Y858 1186 aa11.7□□□□□ -0.54
SHMT2-215ENST00000554656 GALR2O43603 387 aaPredicted RBP11.7□□□□□ -0.54
SHMT2-215ENST00000554656 PAPLNO95428 1278 aa11.7□□□□□ -0.54
SHMT2-215ENST00000554656 GLUD1P00367 558 aa11.7□□□□□ -0.54
SHMT2-215ENST00000554656 F13A1P00488 732 aa11.7□□□□□ -0.54
SHMT2-215ENST00000554656 ADH1AP07327 375 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms