RNA–Protein interactions for RNA: ENST00000554514.1

ARHGEF40-203, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 2,928 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-203ENST00000554514 EN1Q05925 392 aaPredicted RBP16.86■□□□□ 0.29
ARHGEF40-203ENST00000554514 ALCAMQ13740 583 aa16.86■□□□□ 0.29
ARHGEF40-203ENST00000554514 CCDC137Q6PK04 289 aaKnown RBP16.86■□□□□ 0.29
ARHGEF40-203ENST00000554514 NIM1KQ8IY84 436 aa16.86■□□□□ 0.29
ARHGEF40-203ENST00000554514 BSNDQ8WZ55 320 aa16.86■□□□□ 0.29
ARHGEF40-203ENST00000554514 TATDN2Q93075 761 aa16.86■□□□□ 0.29
ARHGEF40-203ENST00000554514 BICD1Q96G01 975 aa16.86■□□□□ 0.29
ARHGEF40-203ENST00000554514 KMT5AQ9NQR1 393 aa16.86■□□□□ 0.29
ARHGEF40-203ENST00000554514 TBC1D22BQ9NU19 505 aa16.86■□□□□ 0.29
ARHGEF40-203ENST00000554514 RASAL2Q9UJF2 1139 aa16.86■□□□□ 0.29
ARHGEF40-203ENST00000554514 PNMA2Q9UL42 364 aa16.86■□□□□ 0.29
ARHGEF40-203ENST00000554514 CAPN7Q9Y6W3 813 aa16.86■□□□□ 0.29
ARHGEF40-203ENST00000554514 PHF2O75151 1096 aa16.86■□□□□ 0.29
ARHGEF40-203ENST00000554514 FGFR4P22455 802 aa16.86■□□□□ 0.29
ARHGEF40-203ENST00000554514 SSTR3P32745 418 aaPredicted RBP16.86■□□□□ 0.29
ARHGEF40-203ENST00000554514 SLCO1A2P46721 670 aa16.86■□□□□ 0.29
ARHGEF40-203ENST00000554514 RPL21P46778 160 aaKnown RBP16.86■□□□□ 0.29
ARHGEF40-203ENST00000554514 PMS2P54278 862 aa16.86■□□□□ 0.29
ARHGEF40-203ENST00000554514 MFAP3P55082 362 aa16.86■□□□□ 0.29
ARHGEF40-203ENST00000554514 PSMC5P62195 406 aa16.86■□□□□ 0.29
ARHGEF40-203ENST00000554514 SLC20A2Q08357 652 aa16.86■□□□□ 0.29
ARHGEF40-203ENST00000554514 DMP1Q13316 513 aaPredicted RBP16.86■□□□□ 0.29
ARHGEF40-203ENST00000554514 BIRC3Q13489 604 aa16.86■□□□□ 0.29
ARHGEF40-203ENST00000554514 MYBPC2Q14324 1141 aa16.86■□□□□ 0.29
ARHGEF40-203ENST00000554514 RNF207Q6ZRF8 634 aa16.86■□□□□ 0.29
ARHGEF40-203ENST00000554514 SEC14L1Q92503 715 aa16.86■□□□□ 0.29
ARHGEF40-203ENST00000554514 SELENOSQ9BQE4 189 aa16.86■□□□□ 0.29
ARHGEF40-203ENST00000554514 ZDHHC18Q9NUE0 388 aa16.86■□□□□ 0.29
ARHGEF40-203ENST00000554514 FZD1Q9UP38 647 aa16.86■□□□□ 0.29
ARHGEF40-203ENST00000554514 KIAA0391O15091 583 aaKnown RBP16.86■□□□□ 0.29
ARHGEF40-203ENST00000554514 TBC1D12O60347 775 aa16.86■□□□□ 0.29
ARHGEF40-203ENST00000554514 PDE6CP51160 858 aa16.86■□□□□ 0.29
ARHGEF40-203ENST00000554514 SMTNP53814 917 aa16.86■□□□□ 0.29
ARHGEF40-203ENST00000554514 SNX1Q13596 522 aa16.86■□□□□ 0.29
ARHGEF40-203ENST00000554514 FAM71AQ8IYT1 594 aa16.86■□□□□ 0.29
ARHGEF40-203ENST00000554514 CEP170P1Q96L14 293 aa16.86■□□□□ 0.29
ARHGEF40-203ENST00000554514 WDR64B1ANS9 1081 aa16.85■□□□□ 0.29
ARHGEF40-203ENST00000554514 H0YHG0 523 aa16.85■□□□□ 0.29
ARHGEF40-203ENST00000554514 WDR46O15213 610 aaKnown RBP16.85■□□□□ 0.29
ARHGEF40-203ENST00000554514 CYP11B1P15538 503 aa16.85■□□□□ 0.29
ARHGEF40-203ENST00000554514 KRT39Q6A163 491 aa16.85■□□□□ 0.29
ARHGEF40-203ENST00000554514 CHADLQ6NUI6 762 aa16.85■□□□□ 0.29
ARHGEF40-203ENST00000554514 C11orf63Q6NUN7 778 aa16.85■□□□□ 0.29
ARHGEF40-203ENST00000554514 ANO5Q75V66 913 aa16.85■□□□□ 0.29
ARHGEF40-203ENST00000554514 TMEM161BQ8NDZ6 487 aa16.85■□□□□ 0.29
ARHGEF40-203ENST00000554514 KAT2BQ92831 832 aa16.85■□□□□ 0.29
ARHGEF40-203ENST00000554514 PSMD1Q99460 953 aa16.85■□□□□ 0.29
ARHGEF40-203ENST00000554514 SLC38A10Q9HBR0 1119 aa16.85■□□□□ 0.29
ARHGEF40-203ENST00000554514 GABBR1Q9UBS5 961 aa16.85■□□□□ 0.29
ARHGEF40-203ENST00000554514 SLC12A6Q9UHW9 1150 aa16.85■□□□□ 0.29
ARHGEF40-203ENST00000554514 MIF4GDA9UHW6 222 aaKnown RBP16.85■□□□□ 0.29
ARHGEF40-203ENST00000554514 PPFIA2O75334 1257 aa16.85■□□□□ 0.29
ARHGEF40-203ENST00000554514 CXCL9Q07325 125 aa16.85■□□□□ 0.29
ARHGEF40-203ENST00000554514 BAATQ14032 418 aaPredicted RBP16.85■□□□□ 0.29
ARHGEF40-203ENST00000554514 QPCTQ16769 361 aa16.85■□□□□ 0.29
ARHGEF40-203ENST00000554514 DAB2IPQ5VWQ8 1189 aa16.85■□□□□ 0.29
ARHGEF40-203ENST00000554514 DENND2CQ68D51 928 aa16.85■□□□□ 0.29
ARHGEF40-203ENST00000554514 LLGL2Q6P1M3 1020 aa16.85■□□□□ 0.29
ARHGEF40-203ENST00000554514 ZDHHC24Q6UX98 284 aa16.85■□□□□ 0.29
ARHGEF40-203ENST00000554514 RTKN2Q8IZC4 609 aa16.85■□□□□ 0.29
ARHGEF40-203ENST00000554514 CYFIP2Q96F07 1278 aa16.85■□□□□ 0.29
ARHGEF40-203ENST00000554514 PDCD2LQ9BRP1 358 aa16.85■□□□□ 0.29
ARHGEF40-203ENST00000554514 CCDC113Q9H0I3 377 aa16.85■□□□□ 0.29
ARHGEF40-203ENST00000554514 RPAP3Q9H6T3 665 aaPredicted RBP16.85■□□□□ 0.29
ARHGEF40-203ENST00000554514 RIPK3Q9Y572 518 aa16.85■□□□□ 0.29
ARHGEF40-203ENST00000554514 HNRNPDLO14979 420 aaKnown RBP16.84■□□□□ 0.29
ARHGEF40-203ENST00000554514 P4HA2O15460 535 aa16.84■□□□□ 0.29
ARHGEF40-203ENST00000554514 ATP2C2O75185 946 aa16.84■□□□□ 0.29
ARHGEF40-203ENST00000554514 FAM107AO95990 144 aa16.84■□□□□ 0.29
ARHGEF40-203ENST00000554514 MAPTP10636 758 aaKnown RBP16.84■□□□□ 0.29
ARHGEF40-203ENST00000554514 DPEP1P16444 411 aa16.84■□□□□ 0.29
ARHGEF40-203ENST00000554514 NCKAP1LP55160 1127 aa16.84■□□□□ 0.29
ARHGEF40-203ENST00000554514 SF3B2Q13435 895 aaKnown RBP16.84■□□□□ 0.29
ARHGEF40-203ENST00000554514 DHX34Q14147 1143 aaKnown RBP16.84■□□□□ 0.29
ARHGEF40-203ENST00000554514 SLC29A2Q14542 456 aa16.84■□□□□ 0.29
ARHGEF40-203ENST00000554514 PARD3BQ8TEW8 1205 aa16.84■□□□□ 0.29
ARHGEF40-203ENST00000554514 C1orf54Q8WWF1 131 aa16.84■□□□□ 0.29
ARHGEF40-203ENST00000554514 NT5C1BQ96P26 610 aa16.84■□□□□ 0.29
ARHGEF40-203ENST00000554514 FAM213AQ9BRX8 229 aa16.84■□□□□ 0.29
ARHGEF40-203ENST00000554514 SEMA4AQ9H3S1 761 aa16.84■□□□□ 0.29
ARHGEF40-203ENST00000554514 PXMP2Q9NR77 195 aa16.84■□□□□ 0.29
ARHGEF40-203ENST00000554514 PFASO15067 1338 aa16.84■□□□□ 0.29
ARHGEF40-203ENST00000554514 GMNCA6NCL1 334 aa16.84■□□□□ 0.29
ARHGEF40-203ENST00000554514 FAM187AA6NFU0 413 aa16.84■□□□□ 0.29
ARHGEF40-203ENST00000554514 PHF20L1A8MW92 1017 aa16.84■□□□□ 0.29
ARHGEF40-203ENST00000554514 CLDN3O15551 220 aa16.84■□□□□ 0.29
ARHGEF40-203ENST00000554514 MEFVO15553 781 aaPredicted RBP16.84■□□□□ 0.29
ARHGEF40-203ENST00000554514 PTGIRP43119 386 aa16.84■□□□□ 0.29
ARHGEF40-203ENST00000554514 PEX5P50542 639 aa16.84■□□□□ 0.29
ARHGEF40-203ENST00000554514 FAM83AQ86UY5 434 aa16.84■□□□□ 0.29
ARHGEF40-203ENST00000554514 C4orf19Q8IY42 314 aa16.84■□□□□ 0.29
ARHGEF40-203ENST00000554514 C1orf131Q8NDD1 294 aaKnown RBP16.84■□□□□ 0.29
ARHGEF40-203ENST00000554514 RAPGEF5Q92565 580 aa16.84■□□□□ 0.29
ARHGEF40-203ENST00000554514 RNF25Q96BH1 459 aaPredicted RBP16.84■□□□□ 0.29
ARHGEF40-203ENST00000554514 ATG4CQ96DT6 458 aa16.84■□□□□ 0.29
ARHGEF40-203ENST00000554514 TRIM7Q9C029 511 aa16.84■□□□□ 0.29
ARHGEF40-203ENST00000554514 AZI2Q9H6S1 392 aa16.84■□□□□ 0.29
ARHGEF40-203ENST00000554514 MYOZ2Q9NPC6 264 aa16.84■□□□□ 0.29
ARHGEF40-203ENST00000554514 ZNRF3Q9ULT6 936 aa16.84■□□□□ 0.29
ARHGEF40-203ENST00000554514 EXOC7Q9UPT5 735 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms