RNA–Protein interactions for RNA: ENST00000554491.5

ATXN3-227, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,064 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-227ENST00000554491 TCF3P15923 654 aa5.14□□□□□ -1.59
ATXN3-227ENST00000554491 ERCC5P28715 1186 aaPredicted RBP5.14□□□□□ -1.59
ATXN3-227ENST00000554491 CASQ1P31415 396 aa5.14□□□□□ -1.59
ATXN3-227ENST00000554491 LBX1P52954 281 aa5.14□□□□□ -1.59
ATXN3-227ENST00000554491 CCT2P78371 535 aaKnown RBP5.14□□□□□ -1.59
ATXN3-227ENST00000554491 HS1BP3Q53T59 392 aa5.14□□□□□ -1.59
ATXN3-227ENST00000554491 HABP4Q5JVS0 413 aaKnown RBP5.14□□□□□ -1.59
ATXN3-227ENST00000554491 JAKMIP3Q5VZ66 844 aa5.14□□□□□ -1.59
ATXN3-227ENST00000554491 RSPO2Q6UXX9 243 aaPredicted RBP5.14□□□□□ -1.59
ATXN3-227ENST00000554491 LBX2Q6XYB7 198 aa5.14□□□□□ -1.59
ATXN3-227ENST00000554491 USP51Q70EK9 711 aa5.14□□□□□ -1.59
ATXN3-227ENST00000554491 HNRNPLLQ8WVV9 542 aaKnown RBP5.14□□□□□ -1.59
ATXN3-227ENST00000554491 ZBTB9Q96C00 473 aa5.14□□□□□ -1.59
ATXN3-227ENST00000554491 CFAP53Q96M91 514 aa5.14□□□□□ -1.59
ATXN3-227ENST00000554491 ARPC5LQ9BPX5 153 aa5.14□□□□□ -1.59
ATXN3-227ENST00000554491 TACO1Q9BSH4 297 aaKnown RBP5.14□□□□□ -1.59
ATXN3-227ENST00000554491 SEMA4AQ9H3S1 761 aa5.14□□□□□ -1.59
ATXN3-227ENST00000554491 CXorf56Q9H5V9 222 aa5.14□□□□□ -1.59
ATXN3-227ENST00000554491 IL16Q14005 1332 aa5.14□□□□□ -1.59
ATXN3-227ENST00000554491 DLEC1Q9Y238 1755 aa5.14□□□□□ -1.59
ATXN3-227ENST00000554491 ITGB4P16144 1822 aa5.13□□□□□ -1.59
ATXN3-227ENST00000554491 ZNF839A8K0R7 811 aa5.13□□□□□ -1.59
ATXN3-227ENST00000554491 GOLGA6L6A8MZA4 724 aa5.13□□□□□ -1.59
ATXN3-227ENST00000554491 GOLGA6L22H0YM25 854 aa5.13□□□□□ -1.59
ATXN3-227ENST00000554491 PRODHO43272 600 aa5.13□□□□□ -1.59
ATXN3-227ENST00000554491 CREB3O43889 395 aa5.13□□□□□ -1.59
ATXN3-227ENST00000554491 STK10O94804 968 aaKnown RBP5.13□□□□□ -1.59
ATXN3-227ENST00000554491 HSPA8P11142 646 aaKnown RBP5.13□□□□□ -1.59
ATXN3-227ENST00000554491 NAP1L1P55209 391 aaKnown RBP5.13□□□□□ -1.59
ATXN3-227ENST00000554491 SPIRE1Q08AE8 756 aa5.13□□□□□ -1.59
ATXN3-227ENST00000554491 ZSCAN26Q16670 478 aa5.13□□□□□ -1.59
ATXN3-227ENST00000554491 AMOTQ4VCS5 1084 aa5.13□□□□□ -1.59
ATXN3-227ENST00000554491 CRB2Q5IJ48 1285 aa5.13□□□□□ -1.59
ATXN3-227ENST00000554491 IGFL4Q6B9Z1 124 aa5.13□□□□□ -1.59
ATXN3-227ENST00000554491 SASS6Q6UVJ0 657 aa5.13□□□□□ -1.59
ATXN3-227ENST00000554491 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-227ENST00000554491 TAX1BP1Q86VP1 789 aa5.13□□□□□ -1.59
ATXN3-227ENST00000554491 ZSCAN30Q86W11 494 aa5.13□□□□□ -1.59
ATXN3-227ENST00000554491 SMC5Q8IY18 1101 aa5.13□□□□□ -1.59
ATXN3-227ENST00000554491 GIMAP8Q8ND71 665 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-227ENST00000554491 OSBP2Q969R2 916 aa5.13□□□□□ -1.59
ATXN3-227ENST00000554491 NEIL1Q96FI4 390 aaPredicted RBP5.13□□□□□ -1.59
ATXN3-227ENST00000554491 AGAP3Q96P47 875 aa5.13□□□□□ -1.59
ATXN3-227ENST00000554491 ADOQ96SZ5 270 aa5.13□□□□□ -1.59
ATXN3-227ENST00000554491 NOL10Q9BSC4 688 aaKnown RBP5.13□□□□□ -1.59
ATXN3-227ENST00000554491 KATNBL1Q9H079 304 aa5.13□□□□□ -1.59
ATXN3-227ENST00000554491 ARHGEF4Q9NR80 690 aa5.13□□□□□ -1.59
ATXN3-227ENST00000554491 CWC15Q9P013 229 aaKnown RBP5.13□□□□□ -1.59
ATXN3-227ENST00000554491 DSEQ9UL01 958 aa5.13□□□□□ -1.59
ATXN3-227ENST00000554491 PNMA2Q9UL42 364 aa5.13□□□□□ -1.59
ATXN3-227ENST00000554491 ZFR2Q9UPR6 939 aaKnown RBP5.13□□□□□ -1.59
ATXN3-227ENST00000554491 MON2Q7Z3U7 1717 aa5.13□□□□□ -1.59
ATXN3-227ENST00000554491 MAP2P11137 1827 aaKnown RBP5.13□□□□□ -1.59
ATXN3-227ENST00000554491 DICER1Q9UPY3 1922 aaKnown RBP5.13□□□□□ -1.59
ATXN3-227ENST00000554491 RGPD2P0DJD1 1756 aa5.12□□□□□ -1.59
ATXN3-227ENST00000554491 NPIPB8E9PQR5 432 aa5.12□□□□□ -1.59
ATXN3-227ENST00000554491 H0Y858 1186 aa5.12□□□□□ -1.59
ATXN3-227ENST00000554491 PPFIA2O75334 1257 aa5.12□□□□□ -1.59
ATXN3-227ENST00000554491 ENO2P09104 434 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-227ENST00000554491 IL2RBP14784 551 aa5.12□□□□□ -1.59
ATXN3-227ENST00000554491 PAX3P23760 479 aa5.12□□□□□ -1.59
ATXN3-227ENST00000554491 FLT3P36888 993 aa5.12□□□□□ -1.59
ATXN3-227ENST00000554491 IRX1P78414 480 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-227ENST00000554491 CBX1P83916 185 aa5.12□□□□□ -1.59
ATXN3-227ENST00000554491 DDX10Q13206 875 aaKnown RBP5.12□□□□□ -1.59
ATXN3-227ENST00000554491 KIZQ2M2Z5 673 aa5.12□□□□□ -1.59
ATXN3-227ENST00000554491 YOD1Q5VVQ6 348 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-227ENST00000554491 MCF2L2Q86YR7 1114 aa5.12□□□□□ -1.59
ATXN3-227ENST00000554491 AMOTL1Q8IY63 956 aa5.12□□□□□ -1.59
ATXN3-227ENST00000554491 FAM184AQ8NB25 1140 aa5.12□□□□□ -1.59
ATXN3-227ENST00000554491 DCAF4Q8WV16 495 aa5.12□□□□□ -1.59
ATXN3-227ENST00000554491 SIN3AQ96ST3 1273 aa5.12□□□□□ -1.59
ATXN3-227ENST00000554491 ZNF341Q9BYN7 854 aa5.12□□□□□ -1.59
ATXN3-227ENST00000554491 CD244Q9BZW8 370 aa5.12□□□□□ -1.59
ATXN3-227ENST00000554491 SLITRK6Q9H5Y7 841 aa5.12□□□□□ -1.59
ATXN3-227ENST00000554491 SLC39A2Q9NP94 309 aa5.12□□□□□ -1.59
ATXN3-227ENST00000554491 UTP6Q9NYH9 597 aaKnown RBP5.12□□□□□ -1.59
ATXN3-227ENST00000554491 RNF181Q9P0P0 153 aa5.12□□□□□ -1.59
ATXN3-227ENST00000554491 COMMD10Q9Y6G5 202 aa5.12□□□□□ -1.59
ATXN3-227ENST00000554491 USP47Q96K76 1375 aa5.12□□□□□ -1.59
ATXN3-227ENST00000554491 KDM6AO15550 1401 aaPredicted RBP5.12□□□□□ -1.59
ATXN3-227ENST00000554491 IPO5O00410 1097 aaKnown RBP5.11□□□□□ -1.59
ATXN3-227ENST00000554491 SOD2P04179 222 aa5.11□□□□□ -1.59
ATXN3-227ENST00000554491 VDRP11473 427 aa5.11□□□□□ -1.59
ATXN3-227ENST00000554491 PABPC1P11940 636 aaKnown RBP5.11□□□□□ -1.59
ATXN3-227ENST00000554491 NAT1P18440 290 aa5.11□□□□□ -1.59
ATXN3-227ENST00000554491 MCM5P33992 734 aa5.11□□□□□ -1.59
ATXN3-227ENST00000554491 EPHA5P54756 1037 aa5.11□□□□□ -1.59
ATXN3-227ENST00000554491 TRAF1Q13077 416 aa5.11□□□□□ -1.59
ATXN3-227ENST00000554491 USP10Q14694 798 aaKnown RBP5.11□□□□□ -1.59
ATXN3-227ENST00000554491 PRKD1Q15139 912 aaPredicted RBP5.11□□□□□ -1.59
ATXN3-227ENST00000554491 DDR2Q16832 855 aa5.11□□□□□ -1.59
ATXN3-227ENST00000554491 RNF207Q6ZRF8 634 aa5.11□□□□□ -1.59
ATXN3-227ENST00000554491 KCTD1Q719H9 257 aa5.11□□□□□ -1.59
ATXN3-227ENST00000554491 ARHGEF25Q86VW2 580 aa5.11□□□□□ -1.59
ATXN3-227ENST00000554491 ANKRD13BQ86YJ7 626 aa5.11□□□□□ -1.59
ATXN3-227ENST00000554491 IFNL2Q8IZJ0 200 aa5.11□□□□□ -1.59
ATXN3-227ENST00000554491 FUKQ8N0W3 1084 aa5.11□□□□□ -1.59
ATXN3-227ENST00000554491 PDCL2Q8N4E4 241 aa5.11□□□□□ -1.59
ATXN3-227ENST00000554491 SAMD3Q8N6K7 520 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms