RNA–Protein interactions for RNA: ENST00000554437.5

SCFD1-211, Transcript of sec1 family domain containing 1, humanhuman

TSL 3

Gene SCFD1, Length 688 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-211ENST00000554437 ZNF585AQ6P3V2 769 aa6.69□□□□□ -1.34
SCFD1-211ENST00000554437 PDZD4Q76G19 769 aaPredicted RBP6.69□□□□□ -1.34
SCFD1-211ENST00000554437 SGMS1Q86VZ5 419 aa6.69□□□□□ -1.34
SCFD1-211ENST00000554437 TTC9BQ8N6N2 239 aa6.69□□□□□ -1.34
SCFD1-211ENST00000554437 WWC2-AS2Q96NR7 200 aa6.69□□□□□ -1.34
SCFD1-211ENST00000554437 BCO1Q9HAY6 547 aa6.69□□□□□ -1.34
SCFD1-211ENST00000554437 TRPS1Q9UHF7 1281 aa6.69□□□□□ -1.34
SCFD1-211ENST00000554437 ADCY6O43306 1168 aa6.68□□□□□ -1.34
SCFD1-211ENST00000554437 HOXA3O43365 443 aaPredicted RBP6.68□□□□□ -1.34
SCFD1-211ENST00000554437 ENDOD1O94919 500 aa6.68□□□□□ -1.34
SCFD1-211ENST00000554437 ACO1P21399 889 aaKnown RBP6.68□□□□□ -1.34
SCFD1-211ENST00000554437 PTPN7P35236 360 aa6.68□□□□□ -1.34
SCFD1-211ENST00000554437 MCL1Q07820 350 aa6.68□□□□□ -1.34
SCFD1-211ENST00000554437 SEPT2Q15019 361 aa6.68□□□□□ -1.34
SCFD1-211ENST00000554437 ELAVL1Q15717 326 aaKnown RBP6.68□□□□□ -1.34
SCFD1-211ENST00000554437 PQLC1Q8N2U9 271 aa6.68□□□□□ -1.34
SCFD1-211ENST00000554437 REPS2Q8NFH8 660 aa6.68□□□□□ -1.34
SCFD1-211ENST00000554437 OR7D4Q8NG98 312 aa6.68□□□□□ -1.34
SCFD1-211ENST00000554437 FAM89AQ96GI7 184 aa6.68□□□□□ -1.34
SCFD1-211ENST00000554437 ADOQ96SZ5 270 aa6.68□□□□□ -1.34
SCFD1-211ENST00000554437 C7orf25Q9BPX7 421 aa6.68□□□□□ -1.34
SCFD1-211ENST00000554437 IP6K2Q9UHH9 426 aa6.68□□□□□ -1.34
SCFD1-211ENST00000554437 JAG2Q9Y219 1238 aa6.68□□□□□ -1.34
SCFD1-211ENST00000554437 ZMYM3Q14202 1370 aa6.68□□□□□ -1.34
SCFD1-211ENST00000554437 CAPN14A8MX76 684 aa6.67□□□□□ -1.34
SCFD1-211ENST00000554437 MFAP3LO75121 409 aa6.67□□□□□ -1.34
SCFD1-211ENST00000554437 IL33O95760 270 aa6.67□□□□□ -1.34
SCFD1-211ENST00000554437 WASP42768 502 aa6.67□□□□□ -1.34
SCFD1-211ENST00000554437 MAGEA10P43363 369 aaPredicted RBP6.67□□□□□ -1.34
SCFD1-211ENST00000554437 SELENOPP49908 381 aa6.67□□□□□ -1.34
SCFD1-211ENST00000554437 EPHB1P54762 984 aa6.67□□□□□ -1.34
SCFD1-211ENST00000554437 ADKP55263 362 aaKnown RBP6.67□□□□□ -1.34
SCFD1-211ENST00000554437 UAP1L1Q3KQV9 507 aa6.67□□□□□ -1.34
SCFD1-211ENST00000554437 TMEM240Q5SV17 173 aa6.67□□□□□ -1.34
SCFD1-211ENST00000554437 PRAMEF14Q5SWL7 426 aa6.67□□□□□ -1.34
SCFD1-211ENST00000554437 Q6ZSN1 163 aa6.67□□□□□ -1.34
SCFD1-211ENST00000554437 ELOA2Q8IYF1 753 aaPredicted RBP6.67□□□□□ -1.34
SCFD1-211ENST00000554437 CMTR2Q8IYT2 770 aaKnown RBP6.67□□□□□ -1.34
SCFD1-211ENST00000554437 MIER2Q8N344 545 aa6.67□□□□□ -1.34
SCFD1-211ENST00000554437 CPA6Q8N4T0 437 aa6.67□□□□□ -1.34
SCFD1-211ENST00000554437 ZNF808Q8N4W9 903 aaPredicted RBP6.67□□□□□ -1.34
SCFD1-211ENST00000554437 OR2I1PQ8NGU4 316 aa6.67□□□□□ -1.34
SCFD1-211ENST00000554437 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.67□□□□□ -1.34
SCFD1-211ENST00000554437 HOXB13Q92826 284 aaPredicted RBP6.67□□□□□ -1.34
SCFD1-211ENST00000554437 COA7Q96BR5 231 aa6.67□□□□□ -1.34
SCFD1-211ENST00000554437 ZRANB2O95218 330 aaKnown RBP eCLIP6.66□□□□□ -1.34
SCFD1-211ENST00000554437 CT47B1P0C2W7 299 aaPredicted RBP6.66□□□□□ -1.34
SCFD1-211ENST00000554437 GNAT2P19087 354 aa6.66□□□□□ -1.34
SCFD1-211ENST00000554437 SREBF1P36956 1147 aa6.66□□□□□ -1.34
SCFD1-211ENST00000554437 RAB27AP51159 221 aa6.66□□□□□ -1.34
SCFD1-211ENST00000554437 PIN1Q13526 163 aaPredicted RBP6.66□□□□□ -1.34
SCFD1-211ENST00000554437 SPATS1Q496A3 300 aa6.66□□□□□ -1.34
SCFD1-211ENST00000554437 MAMDC4Q6UXC1 1216 aa6.66□□□□□ -1.34
SCFD1-211ENST00000554437 MIGA2Q7L4E1 593 aa6.66□□□□□ -1.34
SCFD1-211ENST00000554437 RHOT1Q8IXI2 618 aa6.66□□□□□ -1.34
SCFD1-211ENST00000554437 GSPT2Q8IYD1 628 aaKnown RBP6.66□□□□□ -1.34
SCFD1-211ENST00000554437 TRMT2AQ8IZ69 625 aaKnown RBP6.66□□□□□ -1.34
SCFD1-211ENST00000554437 ANKRD35Q8N283 1001 aa6.66□□□□□ -1.34
SCFD1-211ENST00000554437 FBXO18Q8NFZ0 1043 aa6.66□□□□□ -1.34
SCFD1-211ENST00000554437 HDAC10Q969S8 669 aa6.66□□□□□ -1.34
SCFD1-211ENST00000554437 MIEF2Q96C03 454 aa6.66□□□□□ -1.34
SCFD1-211ENST00000554437 HSPBAP1Q96EW2 488 aa6.66□□□□□ -1.34
SCFD1-211ENST00000554437 BORCS6Q96GS4 357 aa6.66□□□□□ -1.34
SCFD1-211ENST00000554437 PUS7Q96PZ0 661 aaKnown RBP6.66□□□□□ -1.34
SCFD1-211ENST00000554437 CPPED1Q9BRF8 314 aaPredicted RBP6.66□□□□□ -1.34
SCFD1-211ENST00000554437 SENP6Q9GZR1 1112 aaPredicted RBP6.66□□□□□ -1.34
SCFD1-211ENST00000554437 KLC2Q9H0B6 622 aa6.66□□□□□ -1.34
SCFD1-211ENST00000554437 CSRNP2Q9H175 543 aa6.66□□□□□ -1.34
SCFD1-211ENST00000554437 LDAHQ9H6V9 325 aa6.66□□□□□ -1.34
SCFD1-211ENST00000554437 LANCL2Q9NS86 450 aa6.66□□□□□ -1.34
SCFD1-211ENST00000554437 LIMCH1Q9UPQ0 1083 aa6.66□□□□□ -1.34
SCFD1-211ENST00000554437 HDAC5Q9UQL6 1122 aa6.66□□□□□ -1.34
SCFD1-211ENST00000554437 THRAP3Q9Y2W1 955 aaKnown RBP6.66□□□□□ -1.34
SCFD1-211ENST00000554437 E2F8A0AVK6 867 aa6.65□□□□□ -1.34
SCFD1-211ENST00000554437 CCDC154A6NI56 674 aa6.65□□□□□ -1.34
SCFD1-211ENST00000554437 HTRA2O43464 458 aaPredicted RBP6.65□□□□□ -1.34
SCFD1-211ENST00000554437 AKAP10O43572 662 aa6.65□□□□□ -1.34
SCFD1-211ENST00000554437 IPO13O94829 963 aaKnown RBP6.65□□□□□ -1.34
SCFD1-211ENST00000554437 HIBADHP31937 336 aaKnown RBP6.65□□□□□ -1.34
SCFD1-211ENST00000554437 EFEMP1Q12805 493 aa6.65□□□□□ -1.34
SCFD1-211ENST00000554437 APBB1IPQ7Z5R6 666 aaPredicted RBP6.65□□□□□ -1.34
SCFD1-211ENST00000554437 PRRT2Q7Z6L0 340 aaPredicted RBP6.65□□□□□ -1.34
SCFD1-211ENST00000554437 MB21D1Q8N884 522 aa6.65□□□□□ -1.34
SCFD1-211ENST00000554437 CCHCR1Q8TD31 782 aa6.65□□□□□ -1.34
SCFD1-211ENST00000554437 STON2Q8WXE9 905 aa6.65□□□□□ -1.34
SCFD1-211ENST00000554437 JDP2Q8WYK2 163 aa6.65□□□□□ -1.34
SCFD1-211ENST00000554437 ST8SIA2Q92186 375 aa6.65□□□□□ -1.34
SCFD1-211ENST00000554437 EDAQ92838 391 aa6.65□□□□□ -1.34
SCFD1-211ENST00000554437 DVL3Q92997 716 aaPredicted RBP6.65□□□□□ -1.34
SCFD1-211ENST00000554437 PDCD2LQ9BRP1 358 aa6.65□□□□□ -1.34
SCFD1-211ENST00000554437 MANSC1Q9H8J5 431 aa6.65□□□□□ -1.34
SCFD1-211ENST00000554437 HECAQ9UBI9 543 aaPredicted RBP6.65□□□□□ -1.34
SCFD1-211ENST00000554437 SERPINB13Q9UIV8 391 aa6.65□□□□□ -1.34
SCFD1-211ENST00000554437 SIK3Q9Y2K2 1263 aa6.65□□□□□ -1.34
SCFD1-211ENST00000554437 GIT1Q9Y2X7 761 aa6.65□□□□□ -1.34
SCFD1-211ENST00000554437 PCDHA13Q9Y5I0 950 aa6.65□□□□□ -1.34
SCFD1-211ENST00000554437 ABLIM3O94929 683 aa6.64□□□□□ -1.35
SCFD1-211ENST00000554437 PF4V1P10720 104 aa6.64□□□□□ -1.35
SCFD1-211ENST00000554437 ZSCAN20P17040 1043 aaPredicted RBP6.64□□□□□ -1.35
SCFD1-211ENST00000554437 SLC6A9P48067 706 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms