RNA–Protein interactions for RNA: ENST00000554409.1

LINC00640-201, long intergenic non-protein coding RNA 640, humanhuman

TSL 3 BASIC

Gene LINC00640, Length 498 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00640-201ENST00000554409 GALTP07902 379 aa8.3□□□□□ -1.08
LINC00640-201ENST00000554409 PDIA4P13667 645 aaKnown RBP8.3□□□□□ -1.08
LINC00640-201ENST00000554409 NRIP1P48552 1158 aa8.3□□□□□ -1.08
LINC00640-201ENST00000554409 SLC12A3P55017 1021 aa8.3□□□□□ -1.08
LINC00640-201ENST00000554409 ERVFC1P60507 584 aa8.3□□□□□ -1.08
LINC00640-201ENST00000554409 RNASELQ05823 741 aaKnown RBP8.3□□□□□ -1.08
LINC00640-201ENST00000554409 DSC1Q08554 894 aa8.3□□□□□ -1.08
LINC00640-201ENST00000554409 PRPF4BQ13523 1007 aaKnown RBP8.3□□□□□ -1.08
LINC00640-201ENST00000554409 PTPAQ15257 358 aa8.3□□□□□ -1.08
LINC00640-201ENST00000554409 DUSP6Q16828 381 aa8.3□□□□□ -1.08
LINC00640-201ENST00000554409 DDX53Q86TM3 631 aaKnown RBP8.3□□□□□ -1.08
LINC00640-201ENST00000554409 CABP7Q86V35 215 aa8.3□□□□□ -1.08
LINC00640-201ENST00000554409 CALML4Q96GE6 196 aa8.3□□□□□ -1.08
LINC00640-201ENST00000554409 TMEM169Q96HH4 297 aa8.3□□□□□ -1.08
LINC00640-201ENST00000554409 IGSF21Q96ID5 467 aa8.3□□□□□ -1.08
LINC00640-201ENST00000554409 CDK5RAP3Q96JB5 506 aa8.3□□□□□ -1.08
LINC00640-201ENST00000554409 TCF25Q9BQ70 676 aa8.3□□□□□ -1.08
LINC00640-201ENST00000554409 ADPGKQ9BRR6 497 aa8.3□□□□□ -1.08
LINC00640-201ENST00000554409 RUSC1Q9BVN2 902 aa8.3□□□□□ -1.08
LINC00640-201ENST00000554409 TRIM6Q9C030 488 aaPredicted RBP8.3□□□□□ -1.08
LINC00640-201ENST00000554409 ZBP1Q9H171 429 aa8.3□□□□□ -1.08
LINC00640-201ENST00000554409 NXF3Q9H4D5 531 aaKnown RBP8.3□□□□□ -1.08
LINC00640-201ENST00000554409 ZSCAN16Q9H4T2 348 aaPredicted RBP8.3□□□□□ -1.08
LINC00640-201ENST00000554409 PDZD7Q9H5P4 517 aa8.3□□□□□ -1.08
LINC00640-201ENST00000554409 TMEM134Q9H6X4 195 aa8.3□□□□□ -1.08
LINC00640-201ENST00000554409 ARHGAP28Q9P2N2 729 aa8.3□□□□□ -1.08
LINC00640-201ENST00000554409 DNAJB4Q9UDY4 337 aa8.3□□□□□ -1.08
LINC00640-201ENST00000554409 KCNG1Q9UIX4 513 aa8.3□□□□□ -1.08
LINC00640-201ENST00000554409 HES2Q9Y543 173 aa8.3□□□□□ -1.08
LINC00640-201ENST00000554409 MYO7AQ13402 2215 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 NT5C1B-RDH14C9J2C7 533 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 H3BQ06 376 aaPredicted RBP8.29□□□□□ -1.08
LINC00640-201ENST00000554409 TNFRSF10AO00220 468 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 LINC01565O15544 149 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 B4GALT3O60512 393 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 CSPG5O95196 566 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 GLP2RO95838 553 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 POMCP01189 267 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 PLA2G4BP0C869 781 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 GTF2F1P35269 517 aaKnown RBP eCLIP8.29□□□□□ -1.08
LINC00640-201ENST00000554409 MLH1P40692 756 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 UBA7P41226 1012 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 NPTX2P47972 431 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 SLC11A1P49279 550 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 AFF1P51825 1210 aaKnown RBP8.29□□□□□ -1.08
LINC00640-201ENST00000554409 PEX3P56589 373 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 GRIN1Q05586 938 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 DLX2Q07687 328 aaPredicted RBP8.29□□□□□ -1.08
LINC00640-201ENST00000554409 GRIK3Q13003 919 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 COASYQ13057 564 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 DMP1Q13316 513 aaPredicted RBP8.29□□□□□ -1.08
LINC00640-201ENST00000554409 KCNC3Q14003 757 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 GIT2Q14161 759 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 SMC1AQ14683 1233 aaKnown RBP8.29□□□□□ -1.08
LINC00640-201ENST00000554409 BMS1Q14692 1282 aaKnown RBP8.29□□□□□ -1.08
LINC00640-201ENST00000554409 DCAF4L1Q3SXM0 396 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 PLPP4Q5VZY2 271 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 PTCRAQ6ISU1 281 aaPredicted RBP8.29□□□□□ -1.08
LINC00640-201ENST00000554409 TMEM184AQ6ZMB5 413 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 APBB1IPQ7Z5R6 666 aaPredicted RBP8.29□□□□□ -1.08
LINC00640-201ENST00000554409 TMEM173Q86WV6 379 aaPredicted RBP8.29□□□□□ -1.08
LINC00640-201ENST00000554409 CDR2LQ86X02 465 aaPredicted RBP8.29□□□□□ -1.08
LINC00640-201ENST00000554409 ZNF280BQ86YH2 543 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 HSCBQ8IWL3 235 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 COLGALT2Q8IYK4 626 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 GSTCDQ8NEC7 633 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 MICAL1Q8TDZ2 1067 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 LRRC15Q8TF66 581 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 BCL7CQ8WUZ0 217 aaPredicted RBP8.29□□□□□ -1.08
LINC00640-201ENST00000554409 SPIRE2Q8WWL2 714 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 KCNN1Q92952 543 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 ZDHHC16Q969W1 377 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 MSLNLQ96KJ4 702 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 ZFP42Q96MM3 310 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 FAM193BQ96PV7 902 aaPredicted RBP8.29□□□□□ -1.08
LINC00640-201ENST00000554409 GAD1Q99259 594 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 NTPCRQ9BSD7 190 aaKnown RBP8.29□□□□□ -1.08
LINC00640-201ENST00000554409 KIFC3Q9BVG8 833 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 KRTAP3-3Q9BYR6 98 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 KRTAP3-2Q9BYR7 98 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 CCSER1Q9C0I3 900 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 GBP3Q9H0R5 595 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 TLE6Q9H808 572 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 POLD4Q9HCU8 107 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 ENTPD7Q9NQZ7 604 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 CLEC1BQ9P126 229 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 FBXO2Q9UK22 296 aaPredicted RBP8.29□□□□□ -1.08
LINC00640-201ENST00000554409 ODF2LQ9ULJ1 636 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 FAM50BQ9Y247 325 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 TNFSF13BQ9Y275 285 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 RBM19Q9Y4C8 960 aaKnown RBP8.29□□□□□ -1.08
LINC00640-201ENST00000554409 PCDHGC5Q9Y5F6 944 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 SRPRBQ9Y5M8 271 aaKnown RBP8.29□□□□□ -1.08
LINC00640-201ENST00000554409 IRAK3Q9Y616 596 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 CLIC4Q9Y696 253 aa8.29□□□□□ -1.08
LINC00640-201ENST00000554409 PDCD11Q14690 1871 aaKnown RBP8.28□□□□□ -1.08
LINC00640-201ENST00000554409 C2orf71A6NGG8 1288 aa8.28□□□□□ -1.08
LINC00640-201ENST00000554409 CCDC169A6NNP5 214 aa8.28□□□□□ -1.08
LINC00640-201ENST00000554409 HIDE1A8MVS5 230 aa8.28□□□□□ -1.08
LINC00640-201ENST00000554409 K7ERI5 159 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms