RNA–Protein interactions for RNA: ENST00000554292.1

PCNX1-206, Transcript of pecanex 1, humanhuman

TSL 4

Gene PCNX1, Length 402 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-206ENST00000554292 PARP2Q9UGN5 583 aa31.18■■■□□ 2.58
PCNX1-206ENST00000554292 USP25Q9UHP3 1055 aa31.18■■■□□ 2.58
PCNX1-206ENST00000554292 A0A1W2PQ27 194 aa31.17■■■□□ 2.58
PCNX1-206ENST00000554292 A0A1W2PQ64 194 aa31.17■■■□□ 2.58
PCNX1-206ENST00000554292 A0A1W2PQD8 194 aa31.17■■■□□ 2.58
PCNX1-206ENST00000554292 PFKFB1P16118 471 aa31.17■■■□□ 2.58
PCNX1-206ENST00000554292 MPZL3Q6UWV2 235 aa31.17■■■□□ 2.58
PCNX1-206ENST00000554292 THNSL1Q8IYQ7 743 aa31.17■■■□□ 2.58
PCNX1-206ENST00000554292 KLHL23Q8NBE8 558 aa31.17■■■□□ 2.58
PCNX1-206ENST00000554292 HVCN1Q96D96 273 aa31.17■■■□□ 2.58
PCNX1-206ENST00000554292 MRPL38Q96DV4 380 aaKnown RBP31.17■■■□□ 2.58
PCNX1-206ENST00000554292 TCHPQ9BT92 498 aa31.17■■■□□ 2.58
PCNX1-206ENST00000554292 RNF39Q9H2S5 420 aa31.17■■■□□ 2.58
PCNX1-206ENST00000554292 TBX20Q9UMR3 447 aa31.17■■■□□ 2.58
PCNX1-206ENST00000554292 PLXNA4Q9HCM2 1894 aa31.16■■■□□ 2.58
PCNX1-206ENST00000554292 CITO14578 2027 aa31.16■■■□□ 2.58
PCNX1-206ENST00000554292 ARL5CA6NH57 179 aa31.16■■■□□ 2.58
PCNX1-206ENST00000554292 TOM1L1O75674 476 aa31.16■■■□□ 2.58
PCNX1-206ENST00000554292 MLH1P40692 756 aa31.16■■■□□ 2.58
PCNX1-206ENST00000554292 ALDH7A1P49419 539 aaKnown RBP31.16■■■□□ 2.58
PCNX1-206ENST00000554292 KCNT2Q6UVM3 1135 aa31.16■■■□□ 2.58
PCNX1-206ENST00000554292 FAM193BQ96PV7 902 aaPredicted RBP31.16■■■□□ 2.58
PCNX1-206ENST00000554292 RPS6KC1Q96S38 1066 aa31.16■■■□□ 2.58
PCNX1-206ENST00000554292 GAD1Q99259 594 aa31.16■■■□□ 2.58
PCNX1-206ENST00000554292 TRIM9Q9C026 710 aa31.16■■■□□ 2.58
PCNX1-206ENST00000554292 GDPD2Q9HCC8 539 aa31.16■■■□□ 2.58
PCNX1-206ENST00000554292 OLFML3Q9NRN5 406 aa31.16■■■□□ 2.58
PCNX1-206ENST00000554292 PANK4Q9NVE7 773 aa31.16■■■□□ 2.58
PCNX1-206ENST00000554292 PLAGL2Q9UPG8 496 aa31.16■■■□□ 2.58
PCNX1-206ENST00000554292 A0A1B0GVL5 298 aa31.15■■■□□ 2.58
PCNX1-206ENST00000554292 FRMD3A2A2Y4 597 aa31.15■■■□□ 2.58
PCNX1-206ENST00000554292 ZC3H11AO75152 810 aaKnown RBP eCLIP31.15■■■□□ 2.58
PCNX1-206ENST00000554292 MCF2P10911 925 aa31.15■■■□□ 2.58
PCNX1-206ENST00000554292 AKAP5P24588 427 aa31.15■■■□□ 2.58
PCNX1-206ENST00000554292 NMT1P30419 496 aaKnown RBP31.15■■■□□ 2.58
PCNX1-206ENST00000554292 GTF2BQ00403 316 aa31.15■■■□□ 2.58
PCNX1-206ENST00000554292 UBE3AQ05086 875 aa31.15■■■□□ 2.58
PCNX1-206ENST00000554292 HERC4Q5GLZ8 1057 aaPredicted RBP31.15■■■□□ 2.58
PCNX1-206ENST00000554292 CNNM4Q6P4Q7 775 aa31.15■■■□□ 2.58
PCNX1-206ENST00000554292 MRPS27Q92552 414 aaKnown RBP31.15■■■□□ 2.58
PCNX1-206ENST00000554292 STAMQ92783 540 aa31.15■■■□□ 2.58
PCNX1-206ENST00000554292 FIZ1Q96SL8 496 aa31.15■■■□□ 2.58
PCNX1-206ENST00000554292 CDT1Q9H211 546 aa31.15■■■□□ 2.58
PCNX1-206ENST00000554292 MRPL44Q9H9J2 332 aaKnown RBP31.15■■■□□ 2.58
PCNX1-206ENST00000554292 PTPRHQ9HD43 1115 aa31.15■■■□□ 2.58
PCNX1-206ENST00000554292 CHMP5Q9NZZ3 219 aa31.15■■■□□ 2.58
PCNX1-206ENST00000554292 GOLGA6L4A6NEF3 574 aa31.14■■■□□ 2.58
PCNX1-206ENST00000554292 HNRNPDLO14979 420 aaKnown RBP31.14■■■□□ 2.58
PCNX1-206ENST00000554292 ITGB1P05556 798 aa31.14■■■□□ 2.58
PCNX1-206ENST00000554292 SLFN14P0C7P3 912 aa31.14■■■□□ 2.58
PCNX1-206ENST00000554292 PROZP22891 400 aa31.14■■■□□ 2.58
PCNX1-206ENST00000554292 LIG4P49917 911 aa31.14■■■□□ 2.58
PCNX1-206ENST00000554292 ASIC1P78348 528 aa31.14■■■□□ 2.58
PCNX1-206ENST00000554292 ALCAMQ13740 583 aa31.14■■■□□ 2.58
PCNX1-206ENST00000554292 TIGD5Q53EQ6 642 aa31.14■■■□□ 2.58
PCNX1-206ENST00000554292 MICALL1Q8N3F8 863 aa31.14■■■□□ 2.58
PCNX1-206ENST00000554292 CCDC94Q9BW85 323 aaPredicted RBP31.14■■■□□ 2.58
PCNX1-206ENST00000554292 GBP3Q9H0R5 595 aa31.14■■■□□ 2.58
PCNX1-206ENST00000554292 SNTG2Q9NY99 539 aa31.14■■■□□ 2.58
PCNX1-206ENST00000554292 SPG21Q9NZD8 308 aa31.14■■■□□ 2.58
PCNX1-206ENST00000554292 ANKFY1Q9P2R3 1169 aa31.14■■■□□ 2.58
PCNX1-206ENST00000554292 HPSEQ9Y251 543 aa31.14■■■□□ 2.58
PCNX1-206ENST00000554292 FAM237AA0A1B0GTK4 181 aa31.13■■■□□ 2.57
PCNX1-206ENST00000554292 GRM6O15303 877 aa31.13■■■□□ 2.57
PCNX1-206ENST00000554292 FGF18O76093 207 aa31.13■■■□□ 2.57
PCNX1-206ENST00000554292 POMCP01189 267 aa31.13■■■□□ 2.57
PCNX1-206ENST00000554292 PIGRP01833 764 aa31.13■■■□□ 2.57
PCNX1-206ENST00000554292 SYKP43405 635 aa31.13■■■□□ 2.57
PCNX1-206ENST00000554292 NOLC1Q14978 699 aaKnown RBP eCLIP31.13■■■□□ 2.57
PCNX1-206ENST00000554292 MAP4K3Q8IVH8 894 aa31.13■■■□□ 2.57
PCNX1-206ENST00000554292 FSIP1Q8NA03 581 aa31.13■■■□□ 2.57
PCNX1-206ENST00000554292 ZFP42Q96MM3 310 aa31.13■■■□□ 2.57
PCNX1-206ENST00000554292 C7orf25Q9BPX7 421 aa31.13■■■□□ 2.57
PCNX1-206ENST00000554292 NRDE2Q9H7Z3 1164 aa31.13■■■□□ 2.57
PCNX1-206ENST00000554292 TRIP11Q15643 1979 aa31.13■■■□□ 2.57
PCNX1-206ENST00000554292 CLDN3O15551 220 aa31.12■■■□□ 2.57
PCNX1-206ENST00000554292 RECQL4O94761 1208 aa31.12■■■□□ 2.57
PCNX1-206ENST00000554292 GRM5P41594 1212 aa31.12■■■□□ 2.57
PCNX1-206ENST00000554292 MATR3P43243 847 aaKnown RBP eCLIP31.12■■■□□ 2.572e-10■■■□□ 18.4
PCNX1-206ENST00000554292 SCNN1GP51170 649 aa31.12■■■□□ 2.57
PCNX1-206ENST00000554292 BCAR1P56945 870 aa31.12■■■□□ 2.57
PCNX1-206ENST00000554292 ZNF720Q7Z2F6 126 aa31.12■■■□□ 2.57
PCNX1-206ENST00000554292 ZBTB33Q86T24 672 aa31.12■■■□□ 2.57
PCNX1-206ENST00000554292 TMEM175Q9BSA9 504 aa31.12■■■□□ 2.57
PCNX1-206ENST00000554292 ALG13Q9NP73 1137 aaKnown RBP31.12■■■□□ 2.57
PCNX1-206ENST00000554292 TOPORSQ9NS56 1045 aaPredicted RBP31.12■■■□□ 2.57
PCNX1-206ENST00000554292 SERTAD1Q9UHV2 236 aa31.12■■■□□ 2.57
PCNX1-206ENST00000554292 PUF60Q9UHX1 559 aaKnown RBP31.12■■■□□ 2.57
PCNX1-206ENST00000554292 ATG2AQ2TAZ0 1938 aa31.12■■■□□ 2.57
PCNX1-206ENST00000554292 YARSP54577 528 aaKnown RBP31.11■■■□□ 2.57
PCNX1-206ENST00000554292 PLCB3Q01970 1234 aa31.11■■■□□ 2.57
PCNX1-206ENST00000554292 KRT17Q04695 432 aa31.11■■■□□ 2.57
PCNX1-206ENST00000554292 GRIK3Q13003 919 aa31.11■■■□□ 2.57
PCNX1-206ENST00000554292 MYO7AQ13402 2215 aa31.11■■■□□ 2.57
PCNX1-206ENST00000554292 STXBP4Q6ZWJ1 553 aa31.11■■■□□ 2.57
PCNX1-206ENST00000554292 SLC39A11Q8N1S5 342 aa31.11■■■□□ 2.57
PCNX1-206ENST00000554292 SPPL3Q8TCT6 385 aa31.11■■■□□ 2.57
PCNX1-206ENST00000554292 KLK14Q9P0G3 267 aa31.11■■■□□ 2.57
PCNX1-206ENST00000554292 EXOC7Q9UPT5 735 aa31.11■■■□□ 2.57
PCNX1-206ENST00000554292 LZTS1Q9Y250 596 aa31.11■■■□□ 2.57
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms