RNA–Protein interactions for RNA: ENST00000553855.5

PSEN1-209, Transcript of presenilin 1, humanhuman

TSL 1 (best)

Gene PSEN1, Length 1,254 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-209ENST00000553855 FOXD4L6Q3SYB3 417 aaPredicted RBP9.2□□□□□ -0.94
PSEN1-209ENST00000553855 HYIQ5T013 277 aa9.2□□□□□ -0.94
PSEN1-209ENST00000553855 RRAGBQ5VZM2 374 aa9.2□□□□□ -0.94
PSEN1-209ENST00000553855 FAM173BQ6P4H8 233 aa9.2□□□□□ -0.94
PSEN1-209ENST00000553855 NOTUMQ6P988 496 aa9.2□□□□□ -0.94
PSEN1-209ENST00000553855 FOXD4L3Q6VB84 417 aaPredicted RBP9.2□□□□□ -0.94
PSEN1-209ENST00000553855 CCDC73Q6ZRK6 1079 aa9.2□□□□□ -0.94
PSEN1-209ENST00000553855 RTN4RL1Q86UN2 441 aaPredicted RBP9.2□□□□□ -0.94
PSEN1-209ENST00000553855 ECHDC2Q86YB7 292 aa9.2□□□□□ -0.94
PSEN1-209ENST00000553855 CMTR2Q8IYT2 770 aaKnown RBP9.2□□□□□ -0.94
PSEN1-209ENST00000553855 KCNG4Q8TDN1 519 aa9.2□□□□□ -0.94
PSEN1-209ENST00000553855 ASAP3Q8TDY4 903 aa9.2□□□□□ -0.94
PSEN1-209ENST00000553855 PRIMPOLQ96LW4 560 aa9.2□□□□□ -0.94
PSEN1-209ENST00000553855 USP28Q96RU2 1077 aa9.2□□□□□ -0.94
PSEN1-209ENST00000553855 ADPGKQ9BRR6 497 aa9.2□□□□□ -0.94
PSEN1-209ENST00000553855 MRPL9Q9BYD2 267 aaKnown RBP9.2□□□□□ -0.94
PSEN1-209ENST00000553855 NFKBIZQ9BYH8 718 aa9.2□□□□□ -0.94
PSEN1-209ENST00000553855 CSRNP2Q9H175 543 aa9.2□□□□□ -0.94
PSEN1-209ENST00000553855 TMX1Q9H3N1 280 aa9.2□□□□□ -0.94
PSEN1-209ENST00000553855 C17orf75Q9HAS0 396 aa9.2□□□□□ -0.94
PSEN1-209ENST00000553855 IFT122Q9HBG6 1241 aa9.2□□□□□ -0.94
PSEN1-209ENST00000553855 PRMT7Q9NVM4 692 aaPredicted RBP9.2□□□□□ -0.94
PSEN1-209ENST00000553855 PCDHB12Q9Y5F1 795 aa9.2□□□□□ -0.94
PSEN1-209ENST00000553855 COL6A3P12111 3177 aa9.19□□□□□ -0.94
PSEN1-209ENST00000553855 LCHNA4D1U4 455 aa9.19□□□□□ -0.94
PSEN1-209ENST00000553855 MGEA5O60502 916 aa9.19□□□□□ -0.94
PSEN1-209ENST00000553855 PPP6R2O75170 966 aa9.19□□□□□ -0.94
PSEN1-209ENST00000553855 TBCAO75347 108 aaKnown RBP9.19□□□□□ -0.94
PSEN1-209ENST00000553855 FAM13AO94988 1023 aa9.19□□□□□ -0.94
PSEN1-209ENST00000553855 RB1P06400 928 aa9.19□□□□□ -0.94
PSEN1-209ENST00000553855 ME1P48163 572 aa9.19□□□□□ -0.94
PSEN1-209ENST00000553855 NASPP49321 788 aaPredicted RBP9.19□□□□□ -0.94
PSEN1-209ENST00000553855 CLDN10P78369 228 aa9.19□□□□□ -0.94
PSEN1-209ENST00000553855 NUCB2P80303 420 aa9.19□□□□□ -0.94
PSEN1-209ENST00000553855 DHX8Q14562 1220 aaKnown RBP9.19□□□□□ -0.94
PSEN1-209ENST00000553855 DSC3Q14574 896 aa9.19□□□□□ -0.94
PSEN1-209ENST00000553855 PTPAQ15257 358 aa9.19□□□□□ -0.94
PSEN1-209ENST00000553855 ECM1Q16610 540 aa9.19□□□□□ -0.94
PSEN1-209ENST00000553855 PAN2Q504Q3 1202 aaKnown RBP9.19□□□□□ -0.94
PSEN1-209ENST00000553855 GLB1LQ6UWU2 654 aa9.19□□□□□ -0.94
PSEN1-209ENST00000553855 GPBP1Q86WP2 473 aa9.19□□□□□ -0.94
PSEN1-209ENST00000553855 TMEM192Q8IY95 271 aa9.19□□□□□ -0.94
PSEN1-209ENST00000553855 LRRC43Q8N309 656 aa9.19□□□□□ -0.94
PSEN1-209ENST00000553855 MICALL1Q8N3F8 863 aa9.19□□□□□ -0.94
PSEN1-209ENST00000553855 SYT2Q8N9I0 419 aaPredicted RBP9.19□□□□□ -0.94
PSEN1-209ENST00000553855 URGCPQ8TCY9 931 aa9.19□□□□□ -0.94
PSEN1-209ENST00000553855 LINC01599Q8WXQ3 324 aa9.19□□□□□ -0.94
PSEN1-209ENST00000553855 LARP4BQ92615 738 aaKnown RBP9.19□□□□□ -0.94
PSEN1-209ENST00000553855 MMTAG2Q9BU76 263 aaKnown RBP9.19□□□□□ -0.94
PSEN1-209ENST00000553855 C11orf84Q9BUA3 381 aaPredicted RBP9.19□□□□□ -0.94
PSEN1-209ENST00000553855 CCSER1Q9C0I3 900 aa9.19□□□□□ -0.94
PSEN1-209ENST00000553855 LRRC27Q9C0I9 530 aa9.19□□□□□ -0.94
PSEN1-209ENST00000553855 TMEM117Q9H0C3 514 aa9.19□□□□□ -0.94
PSEN1-209ENST00000553855 UBN1Q9NPG3 1134 aa9.19□□□□□ -0.94
PSEN1-209ENST00000553855 GPRC5CQ9NQ84 441 aa9.19□□□□□ -0.94
PSEN1-209ENST00000553855 KMT5AQ9NQR1 393 aa9.19□□□□□ -0.94
PSEN1-209ENST00000553855 AGPAT5Q9NUQ2 364 aa9.19□□□□□ -0.94
PSEN1-209ENST00000553855 FAM105AQ9NUU6 356 aa9.19□□□□□ -0.94
PSEN1-209ENST00000553855 DNAAF2Q9NVR5 837 aaKnown RBP9.19□□□□□ -0.94
PSEN1-209ENST00000553855 FAM13BQ9NYF5 915 aa9.19□□□□□ -0.94
PSEN1-209ENST00000553855 LARSQ9P2J5 1176 aaKnown RBP9.19□□□□□ -0.94
PSEN1-209ENST00000553855 STK17AQ9UEE5 414 aa9.19□□□□□ -0.94
PSEN1-209ENST00000553855 DOLKQ9UPQ8 538 aa9.19□□□□□ -0.94
PSEN1-209ENST00000553855 RBM19Q9Y4C8 960 aaKnown RBP9.19□□□□□ -0.94
PSEN1-209ENST00000553855 MORC2Q9Y6X9 1032 aaPredicted RBP9.19□□□□□ -0.94
PSEN1-209ENST00000553855 K7ERI5 159 aa9.18□□□□□ -0.94
PSEN1-209ENST00000553855 CUTAO60888 179 aa9.18□□□□□ -0.94
PSEN1-209ENST00000553855 HIP1RO75146 1068 aa9.18□□□□□ -0.94
PSEN1-209ENST00000553855 PRKCBP05771 671 aa9.18□□□□□ -0.94
PSEN1-209ENST00000553855 ITGA4P13612 1032 aa9.18□□□□□ -0.94
PSEN1-209ENST00000553855 LAG3P18627 525 aa9.18□□□□□ -0.94
PSEN1-209ENST00000553855 PLCG1P19174 1290 aa9.18□□□□□ -0.94
PSEN1-209ENST00000553855 GUCY2CP25092 1073 aa9.18□□□□□ -0.94
PSEN1-209ENST00000553855 ABCD1P33897 745 aa9.18□□□□□ -0.94
PSEN1-209ENST00000553855 ANP32AP39687 249 aaKnown RBP9.18□□□□□ -0.94
PSEN1-209ENST00000553855 STAT6P42226 847 aa9.18□□□□□ -0.94
PSEN1-209ENST00000553855 PEX3P56589 373 aa9.18□□□□□ -0.94
PSEN1-209ENST00000553855 KRT85P78386 507 aa9.18□□□□□ -0.94
PSEN1-209ENST00000553855 FAM189BP81408 668 aa9.18□□□□□ -0.94
PSEN1-209ENST00000553855 RNASELQ05823 741 aaKnown RBP9.18□□□□□ -0.94
PSEN1-209ENST00000553855 STRN3Q13033 797 aa9.18□□□□□ -0.94
PSEN1-209ENST00000553855 GRB10Q13322 594 aa9.18□□□□□ -0.94
PSEN1-209ENST00000553855 GPM6BQ13491 265 aa9.18□□□□□ -0.94
PSEN1-209ENST00000553855 PRPF4BQ13523 1007 aaKnown RBP9.18□□□□□ -0.94
PSEN1-209ENST00000553855 BMS1Q14692 1282 aaKnown RBP9.18□□□□□ -0.94
PSEN1-209ENST00000553855 KARSQ15046 597 aaKnown RBP9.18□□□□□ -0.94
PSEN1-209ENST00000553855 TMEM119Q4V9L6 283 aa9.18□□□□□ -0.94
PSEN1-209ENST00000553855 EPC2Q52LR7 807 aa9.18□□□□□ -0.94
PSEN1-209ENST00000553855 NAALADL2Q58DX5 795 aa9.18□□□□□ -0.94
PSEN1-209ENST00000553855 RINT1Q6NUQ1 792 aa9.18□□□□□ -0.94
PSEN1-209ENST00000553855 SV2BQ7L1I2 683 aa9.18□□□□□ -0.94
PSEN1-209ENST00000553855 LINC00301Q8NCQ3 95 aa9.18□□□□□ -0.94
PSEN1-209ENST00000553855 MAFAQ8NHW3 353 aaPredicted RBP9.18□□□□□ -0.94
PSEN1-209ENST00000553855 RAD54LQ92698 747 aa9.18□□□□□ -0.94
PSEN1-209ENST00000553855 PPP2R3CQ969Q6 453 aa9.18□□□□□ -0.94
PSEN1-209ENST00000553855 ZNF689Q96CS4 500 aaPredicted RBP9.18□□□□□ -0.94
PSEN1-209ENST00000553855 GUCD1Q96NT3 240 aa9.18□□□□□ -0.94
PSEN1-209ENST00000553855 PNMA5Q96PV4 448 aa9.18□□□□□ -0.94
PSEN1-209ENST00000553855 FAM193BQ96PV7 902 aaPredicted RBP9.18□□□□□ -0.94
PSEN1-209ENST00000553855 PYM1Q9BRP8 204 aaKnown RBP9.18□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms