RNA–Protein interactions for RNA: ENST00000553823.5

NEK9-202, Transcript of NIMA related kinase 9, humanhuman

TSL 5

Gene NEK9, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-202ENST00000553823 FBXL18Q96ME1 805 aa12.82□□□□□ -0.36
NEK9-202ENST00000553823 MSTO1Q9BUK6 570 aa12.82□□□□□ -0.36
NEK9-202ENST00000553823 HAPLN2Q9GZV7 340 aa12.82□□□□□ -0.36
NEK9-202ENST00000553823 NDST4Q9H3R1 872 aa12.82□□□□□ -0.36
NEK9-202ENST00000553823 PTPRHQ9HD43 1115 aa12.82□□□□□ -0.36
NEK9-202ENST00000553823 PRDM10Q9NQV6 1147 aa12.82□□□□□ -0.36
NEK9-202ENST00000553823 CDY2AQ9Y6F7 541 aa12.82□□□□□ -0.36
NEK9-202ENST00000553823 CITO14578 2027 aa12.82□□□□□ -0.36
NEK9-202ENST00000553823 ABLIM1O14639 778 aa12.81□□□□□ -0.36
NEK9-202ENST00000553823 B4GALT4O60513 344 aa12.81□□□□□ -0.36
NEK9-202ENST00000553823 CAND2O75155 1236 aa12.81□□□□□ -0.36
NEK9-202ENST00000553823 ADRB2P07550 413 aa12.81□□□□□ -0.36
NEK9-202ENST00000553823 ARF4P18085 180 aaPredicted RBP12.81□□□□□ -0.36
NEK9-202ENST00000553823 FGFR4P22455 802 aa12.81□□□□□ -0.36
NEK9-202ENST00000553823 SFPQP23246 707 aaKnown RBP eCLIP12.81□□□□□ -0.36
NEK9-202ENST00000553823 THPOP40225 353 aa12.81□□□□□ -0.36
NEK9-202ENST00000553823 GJA8P48165 433 aa12.81□□□□□ -0.36
NEK9-202ENST00000553823 UBXN1Q04323 297 aa12.81□□□□□ -0.36
NEK9-202ENST00000553823 NOLC1Q14978 699 aaKnown RBP eCLIP12.81□□□□□ -0.36
NEK9-202ENST00000553823 TRIM71Q2Q1W2 868 aaKnown RBP12.81□□□□□ -0.36
NEK9-202ENST00000553823 ZNF568Q3ZCX4 644 aa12.81□□□□□ -0.36
NEK9-202ENST00000553823 DCAF17Q5H9S7 520 aaPredicted RBP12.81□□□□□ -0.36
NEK9-202ENST00000553823 FKBP15Q5T1M5 1219 aa12.81□□□□□ -0.36
NEK9-202ENST00000553823 EEF1DP3Q658K8 133 aa12.81□□□□□ -0.36
NEK9-202ENST00000553823 ZBTB33Q86T24 672 aa12.81□□□□□ -0.36
NEK9-202ENST00000553823 CBWD2Q8IUF1 395 aa12.81□□□□□ -0.36
NEK9-202ENST00000553823 VSTM4Q8IW00 320 aa12.81□□□□□ -0.36
NEK9-202ENST00000553823 TMEM40Q8WWA1 233 aa12.81□□□□□ -0.36
NEK9-202ENST00000553823 DHX38Q92620 1227 aaKnown RBP12.81□□□□□ -0.36
NEK9-202ENST00000553823 FAM213AQ9BRX8 229 aa12.81□□□□□ -0.36
NEK9-202ENST00000553823 SENP6Q9GZR1 1112 aaPredicted RBP12.81□□□□□ -0.36
NEK9-202ENST00000553823 TRPV6Q9H1D0 765 aa12.81□□□□□ -0.36
NEK9-202ENST00000553823 TRIP11Q15643 1979 aa12.8□□□□□ -0.36
NEK9-202ENST00000553823 A0A1B0GUA9 196 aa12.8□□□□□ -0.36
NEK9-202ENST00000553823 ZNF233A6NK53 670 aa12.8□□□□□ -0.36
NEK9-202ENST00000553823 OGTO15294 1046 aa12.8□□□□□ -0.36
NEK9-202ENST00000553823 CHRNA1P02708 482 aa12.8□□□□□ -0.36
NEK9-202ENST00000553823 AFPP02771 609 aaKnown RBP12.8□□□□□ -0.36
NEK9-202ENST00000553823 CTSHP09668 335 aa12.8□□□□□ -0.36
NEK9-202ENST00000553823 HARSP12081 509 aaKnown RBP12.8□□□□□ -0.36
NEK9-202ENST00000553823 CAPN2P17655 700 aa12.8□□□□□ -0.36
NEK9-202ENST00000553823 AXLP30530 894 aa12.8□□□□□ -0.36
NEK9-202ENST00000553823 MNX1P50219 401 aaPredicted RBP12.8□□□□□ -0.36
NEK9-202ENST00000553823 VAMP7P51809 220 aa12.8□□□□□ -0.36
NEK9-202ENST00000553823 MGAT3Q09327 533 aa12.8□□□□□ -0.36
NEK9-202ENST00000553823 KCNH2Q12809 1159 aa12.8□□□□□ -0.36
NEK9-202ENST00000553823 BFSP1Q12934 665 aa12.8□□□□□ -0.36
NEK9-202ENST00000553823 TCERG1LQ5VWI1 586 aa12.8□□□□□ -0.36
NEK9-202ENST00000553823 TMC6Q7Z403 805 aa12.8□□□□□ -0.36
NEK9-202ENST00000553823 ANKLE1Q8NAG6 615 aa12.8□□□□□ -0.36
NEK9-202ENST00000553823 SPC24Q8NBT2 197 aa12.8□□□□□ -0.36
NEK9-202ENST00000553823 CPB2Q96IY4 423 aa12.8□□□□□ -0.36
NEK9-202ENST00000553823 MFSD14AQ96MC6 490 aa12.8□□□□□ -0.36
NEK9-202ENST00000553823 ADPGKQ9BRR6 497 aa12.8□□□□□ -0.36
NEK9-202ENST00000553823 CDT1Q9H211 546 aa12.8□□□□□ -0.36
NEK9-202ENST00000553823 PDZD7Q9H5P4 517 aa12.8□□□□□ -0.36
NEK9-202ENST00000553823 ANK1P16157 1881 aa12.79□□□□□ -0.36
NEK9-202ENST00000553823 A0A1W2PQC6 194 aa12.79□□□□□ -0.36
NEK9-202ENST00000553823 C19orf67A6NJJ6 358 aa12.79□□□□□ -0.36
NEK9-202ENST00000553823 MCF2P10911 925 aa12.79□□□□□ -0.36
NEK9-202ENST00000553823 HOXA11P31270 313 aaPredicted RBP12.79□□□□□ -0.36
NEK9-202ENST00000553823 PBX1P40424 430 aa12.79□□□□□ -0.36
NEK9-202ENST00000553823 ACOT2P49753 483 aa12.79□□□□□ -0.36
NEK9-202ENST00000553823 MCCD1P59942 119 aaPredicted RBP12.79□□□□□ -0.36
NEK9-202ENST00000553823 ENPEPQ07075 957 aa12.79□□□□□ -0.36
NEK9-202ENST00000553823 CYP24A1Q07973 514 aa12.79□□□□□ -0.36
NEK9-202ENST00000553823 FAM26DQ5JW98 314 aa12.79□□□□□ -0.36
NEK9-202ENST00000553823 NOTUMQ6P988 496 aa12.79□□□□□ -0.36
NEK9-202ENST00000553823 CRELD2Q6UXH1 353 aaPredicted RBP12.79□□□□□ -0.36
NEK9-202ENST00000553823 APBB1IPQ7Z5R6 666 aaPredicted RBP12.79□□□□□ -0.36
NEK9-202ENST00000553823 USP37Q86T82 979 aa12.79□□□□□ -0.36
NEK9-202ENST00000553823 FAM228AQ86W67 206 aa12.79□□□□□ -0.36
NEK9-202ENST00000553823 CDR2LQ86X02 465 aaPredicted RBP12.79□□□□□ -0.36
NEK9-202ENST00000553823 FAM126BQ8IXS8 530 aa12.79□□□□□ -0.36
NEK9-202ENST00000553823 TMC2Q8TDI7 906 aa12.79□□□□□ -0.36
NEK9-202ENST00000553823 SLC35C1Q96A29 364 aa12.79□□□□□ -0.36
NEK9-202ENST00000553823 TMEM106CQ9BVX2 250 aa12.79□□□□□ -0.36
NEK9-202ENST00000553823 AGPAT5Q9NUQ2 364 aa12.79□□□□□ -0.36
NEK9-202ENST00000553823 NOC2LQ9Y3T9 749 aaKnown RBP12.79□□□□□ -0.36
NEK9-202ENST00000553823 MROH7Q68CQ1 1323 aa12.79□□□□□ -0.36
NEK9-202ENST00000553823 BRCA2P51587 3418 aa12.79□□□□□ -0.36
NEK9-202ENST00000553823 GOLGA6L6A8MZA4 724 aa12.78□□□□□ -0.36
NEK9-202ENST00000553823 TLR3O15455 904 aaKnown RBP12.78□□□□□ -0.36
NEK9-202ENST00000553823 FAM189A1O60320 539 aa12.78□□□□□ -0.36
NEK9-202ENST00000553823 RPS6KA5O75582 802 aa12.78□□□□□ -0.36
NEK9-202ENST00000553823 CD4P01730 458 aa12.78□□□□□ -0.36
NEK9-202ENST00000553823 TRIM49P0CI25 452 aa12.78□□□□□ -0.36
NEK9-202ENST00000553823 TRIM49CP0CI26 452 aa12.78□□□□□ -0.36
NEK9-202ENST00000553823 CKBP12277 381 aa12.78□□□□□ -0.36
NEK9-202ENST00000553823 RBL2Q08999 1139 aa12.78□□□□□ -0.36
NEK9-202ENST00000553823 KYAT1Q16773 422 aa12.78□□□□□ -0.36
NEK9-202ENST00000553823 PTPN21Q16825 1174 aa12.78□□□□□ -0.36
NEK9-202ENST00000553823 DCAF4L1Q3SXM0 396 aa12.78□□□□□ -0.36
NEK9-202ENST00000553823 ZBTB41Q5SVQ8 909 aa12.78□□□□□ -0.36
NEK9-202ENST00000553823 SPECC1LQ69YQ0 1117 aa12.78□□□□□ -0.36
NEK9-202ENST00000553823 SLC39A5Q6ZMH5 540 aa12.78□□□□□ -0.36
NEK9-202ENST00000553823 BRSK2Q8IWQ3 736 aa12.78□□□□□ -0.36
NEK9-202ENST00000553823 THNSL1Q8IYQ7 743 aa12.78□□□□□ -0.36
NEK9-202ENST00000553823 CAGE1Q8TC20 777 aa12.78□□□□□ -0.36
NEK9-202ENST00000553823 PARD3BQ8TEW8 1205 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms