RNA–Protein interactions for RNA: ENST00000553753.5

HNRNPC-208, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 5 BASIC

Gene HNRNPC, Length 1,790 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-208ENST00000553753 PLS3P13797 630 aa11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 DDIT3P35638 169 aa11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 LTBRP36941 435 aa11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 SLC11A1P49279 550 aa11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 NASPP49321 788 aaPredicted RBP11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 SCNN1GP51170 649 aa11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 ADAM15Q13444 863 aa11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 DHX8Q14562 1220 aaKnown RBP11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 NT5DC1Q5TFE4 455 aa11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 ATF7IP2Q5U623 682 aa11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 KRI1Q8N9T8 703 aaKnown RBP11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 GSTCDQ8NEC7 633 aa11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 SPIRE2Q8WWL2 714 aa11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 RAD54LQ92698 747 aa11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 TMEM175Q9BSA9 504 aa11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 MIOSQ9NXC5 875 aa11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 LARSQ9P2J5 1176 aaKnown RBP11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 CCDC39Q9UFE4 941 aa11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 ODF2LQ9ULJ1 636 aa11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 FAN1Q9Y2M0 1017 aa11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 NRP1O14786 923 aa11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 PER2O15055 1255 aa11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 SLC16A4O15374 487 aa11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 LINC01565O15544 149 aa11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 TXLNAP40222 546 aa11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 DLX2Q07687 328 aaPredicted RBP11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 MCM6Q14566 821 aa11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 BMS1Q14692 1282 aaKnown RBP11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 FOXD4L5Q5VV16 416 aaPredicted RBP11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 PLPP4Q5VZY2 271 aa11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 EEF1DP3Q658K8 133 aa11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 TAS1R3Q7RTX0 852 aa11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 DDX53Q86TM3 631 aaKnown RBP11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 GPBP1Q86WP2 473 aa11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 COLGALT2Q8IYK4 626 aa11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 VPS52Q8N1B4 723 aa11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 EFHBQ8N7U6 833 aa11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 LINC00301Q8NCQ3 95 aa11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 FOXD4L4Q8WXT5 416 aaPredicted RBP11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 LARP4BQ92615 738 aaKnown RBP11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 ZNF396Q96N95 335 aaPredicted RBP11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 UHRF1Q96T88 793 aaPredicted RBP11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 REEP2Q9BRK0 252 aa11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 MRPL4Q9BYD3 311 aaKnown RBP11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 SNTG2Q9NY99 539 aa11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 KLK14Q9P0G3 267 aa11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 TFIP11Q9UBB9 837 aaKnown RBP11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 TNFSF13BQ9Y275 285 aa11.23□□□□□ -0.61
HNRNPC-208ENST00000553753 MYH11P35749 1972 aa11.22□□□□□ -0.61
HNRNPC-208ENST00000553753 FSD2A1L4K1 749 aa11.22□□□□□ -0.61
HNRNPC-208ENST00000553753 HIDE1A8MVS5 230 aa11.22□□□□□ -0.61
HNRNPC-208ENST00000553753 NR1I2O75469 434 aa11.22□□□□□ -0.61
HNRNPC-208ENST00000553753 NDUFV1P49821 464 aa11.22□□□□□ -0.61
HNRNPC-208ENST00000553753 DSC1Q08554 894 aa11.22□□□□□ -0.61
HNRNPC-208ENST00000553753 SMC1AQ14683 1233 aaKnown RBP11.22□□□□□ -0.61
HNRNPC-208ENST00000553753 STK38Q15208 465 aa11.22□□□□□ -0.61
HNRNPC-208ENST00000553753 DCAF4L1Q3SXM0 396 aa11.22□□□□□ -0.61
HNRNPC-208ENST00000553753 APBB1IPQ7Z5R6 666 aaPredicted RBP11.22□□□□□ -0.61
HNRNPC-208ENST00000553753 MRPL43Q8N983 215 aaKnown RBP11.22□□□□□ -0.61
HNRNPC-208ENST00000553753 TMEM161BQ8NDZ6 487 aa11.22□□□□□ -0.61
HNRNPC-208ENST00000553753 BCL7CQ8WUZ0 217 aaPredicted RBP11.22□□□□□ -0.61
HNRNPC-208ENST00000553753 RPS6KC1Q96S38 1066 aa11.22□□□□□ -0.61
HNRNPC-208ENST00000553753 CDCA3Q99618 268 aaPredicted RBP11.22□□□□□ -0.61
HNRNPC-208ENST00000553753 ACO2Q99798 780 aaKnown RBP11.22□□□□□ -0.61
HNRNPC-208ENST00000553753 STK39Q9UEW8 545 aa11.22□□□□□ -0.61
HNRNPC-208ENST00000553753 ZMYM2Q9UBW7 1377 aa11.22□□□□□ -0.61
HNRNPC-208ENST00000553753 SPTLC2O15270 562 aa11.21□□□□□ -0.61
HNRNPC-208ENST00000553753 PPP6R2O75170 966 aa11.21□□□□□ -0.61
HNRNPC-208ENST00000553753 TBX10O75333 385 aa11.21□□□□□ -0.61
HNRNPC-208ENST00000553753 F13A1P00488 732 aa11.21□□□□□ -0.61
HNRNPC-208ENST00000553753 KRT18P05783 430 aaKnown RBP11.21□□□□□ -0.61
HNRNPC-208ENST00000553753 OR1G1P47890 313 aa11.21□□□□□ -0.61
HNRNPC-208ENST00000553753 GRIK3Q13003 919 aa11.21□□□□□ -0.61
HNRNPC-208ENST00000553753 STRN3Q13033 797 aa11.21□□□□□ -0.61
HNRNPC-208ENST00000553753 PKP1Q13835 747 aa11.21□□□□□ -0.61
HNRNPC-208ENST00000553753 GIT2Q14161 759 aa11.21□□□□□ -0.61
HNRNPC-208ENST00000553753 DUSP6Q16828 381 aa11.21□□□□□ -0.61
HNRNPC-208ENST00000553753 PUS10Q3MIT2 529 aaKnown RBP11.21□□□□□ -0.61
HNRNPC-208ENST00000553753 RRAGBQ5VZM2 374 aa11.21□□□□□ -0.61
HNRNPC-208ENST00000553753 PTCRAQ6ISU1 281 aaPredicted RBP11.21□□□□□ -0.61
HNRNPC-208ENST00000553753 TCHPQ9BT92 498 aa11.21□□□□□ -0.61
HNRNPC-208ENST00000553753 TARS2Q9BW92 718 aaKnown RBP11.21□□□□□ -0.61
HNRNPC-208ENST00000553753 PARVGQ9HBI0 331 aa11.21□□□□□ -0.61
HNRNPC-208ENST00000553753 PTPRHQ9HD43 1115 aa11.21□□□□□ -0.61
HNRNPC-208ENST00000553753 STK17AQ9UEE5 414 aa11.21□□□□□ -0.61
HNRNPC-208ENST00000553753 GDAQ9Y2T3 454 aa11.21□□□□□ -0.61
HNRNPC-208ENST00000553753 TDRD15B5MCY1 1934 aaKnown RBP11.21□□□□□ -0.62
HNRNPC-208ENST00000553753 GRXCR2A6NFK2 248 aa11.21□□□□□ -0.62
HNRNPC-208ENST00000553753 C2orf71A6NGG8 1288 aa11.21□□□□□ -0.62
HNRNPC-208ENST00000553753 H0YCG3 227 aa11.21□□□□□ -0.62
HNRNPC-208ENST00000553753 RECQL4O94761 1208 aa11.21□□□□□ -0.62
HNRNPC-208ENST00000553753 FAM13AO94988 1023 aa11.21□□□□□ -0.62
HNRNPC-208ENST00000553753 YEATS4O95619 227 aa11.21□□□□□ -0.62
HNRNPC-208ENST00000553753 CXCL14O95715 111 aa11.21□□□□□ -0.62
HNRNPC-208ENST00000553753 GLP2RO95838 553 aa11.21□□□□□ -0.62
HNRNPC-208ENST00000553753 CTSAP10619 480 aa11.21□□□□□ -0.62
HNRNPC-208ENST00000553753 MAPTP10636 758 aaKnown RBP11.21□□□□□ -0.62
HNRNPC-208ENST00000553753 ZNF131P52739 623 aa11.21□□□□□ -0.62
HNRNPC-208ENST00000553753 NCKAP1LP55160 1127 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms