RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 Q4G0T1 1027 aa17.66■□□□□ 0.42
ACTN1-209ENST00000553659 XKR3Q5GH77 459 aa17.66■□□□□ 0.42
ACTN1-209ENST00000553659 MIER3Q7Z3K6 550 aa17.66■□□□□ 0.42
ACTN1-209ENST00000553659 TBCKQ8TEA7 893 aa17.66■□□□□ 0.42
ACTN1-209ENST00000553659 RSPH1Q8WYR4 309 aa17.66■□□□□ 0.42
ACTN1-209ENST00000553659 GJA10Q969M2 543 aa17.66■□□□□ 0.42
ACTN1-209ENST00000553659 EPSTI1Q96J88 318 aa17.66■□□□□ 0.42
ACTN1-209ENST00000553659 NECTIN4Q96NY8 510 aa17.66■□□□□ 0.42
ACTN1-209ENST00000553659 CEP89Q96ST8 783 aa17.66■□□□□ 0.42
ACTN1-209ENST00000553659 TRAIPQ9BWF2 469 aa17.66■□□□□ 0.42
ACTN1-209ENST00000553659 IGKV6-21A0A0C4DH24 114 aa17.65■□□□□ 0.42
ACTN1-209ENST00000553659 NT5C1B-RDH14C9J2C7 533 aa17.65■□□□□ 0.42
ACTN1-209ENST00000553659 WNT7AO00755 349 aa17.65■□□□□ 0.42
ACTN1-209ENST00000553659 ZNF500O60304 480 aaPredicted RBP17.65■□□□□ 0.42
ACTN1-209ENST00000553659 CCNT1O60563 726 aaKnown RBP17.65■□□□□ 0.42
ACTN1-209ENST00000553659 STBD1O95210 358 aa17.65■□□□□ 0.42
ACTN1-209ENST00000553659 SP100P23497 879 aaPredicted RBP17.65■□□□□ 0.42
ACTN1-209ENST00000553659 UBA7P41226 1012 aa17.65■□□□□ 0.42
ACTN1-209ENST00000553659 PHKA2P46019 1235 aa17.65■□□□□ 0.42
ACTN1-209ENST00000553659 DNM2P50570 870 aa17.65■□□□□ 0.42
ACTN1-209ENST00000553659 VCPP55072 806 aaKnown RBP17.65■□□□□ 0.42
ACTN1-209ENST00000553659 MORC3Q14149 939 aa17.65■□□□□ 0.42
ACTN1-209ENST00000553659 LETM2Q2VYF4 491 aa17.65■□□□□ 0.42
ACTN1-209ENST00000553659 MTERF2Q49AM1 385 aa17.65■□□□□ 0.42
ACTN1-209ENST00000553659 PPP4R3AQ6IN85 833 aa17.65■□□□□ 0.42
ACTN1-209ENST00000553659 ZBTB33Q86T24 672 aa17.65■□□□□ 0.42
ACTN1-209ENST00000553659 PDILTQ8N807 584 aa17.65■□□□□ 0.42
ACTN1-209ENST00000553659 PAGE5Q96GU1 130 aa17.65■□□□□ 0.42
ACTN1-209ENST00000553659 TMEM169Q96HH4 297 aa17.65■□□□□ 0.42
ACTN1-209ENST00000553659 RIPOR3Q96MK2 946 aa17.65■□□□□ 0.42
ACTN1-209ENST00000553659 INO80BQ9C086 356 aaPredicted RBP17.65■□□□□ 0.42
ACTN1-209ENST00000553659 SEPT9Q9UHD8 586 aaPredicted RBP17.65■□□□□ 0.42
ACTN1-209ENST00000553659 MAN1B1Q9UKM7 699 aa17.65■□□□□ 0.42
ACTN1-209ENST00000553659 CYP3A7-CYP3A51PA0A087WV96 503 aa17.64■□□□□ 0.41
ACTN1-209ENST00000553659 A0A087WZ62 844 aa17.64■□□□□ 0.41
ACTN1-209ENST00000553659 CARNS1A5YM72 827 aa17.64■□□□□ 0.41
ACTN1-209ENST00000553659 BIN1O00499 593 aa17.64■□□□□ 0.41
ACTN1-209ENST00000553659 CBFA2T2O43439 604 aa17.64■□□□□ 0.41
ACTN1-209ENST00000553659 SLC26A4O43511 780 aa17.64■□□□□ 0.41
ACTN1-209ENST00000553659 SKIP12755 728 aa17.64■□□□□ 0.41
ACTN1-209ENST00000553659 CYP3A7P24462 503 aa17.64■□□□□ 0.41
ACTN1-209ENST00000553659 ERCC5P28715 1186 aaPredicted RBP17.64■□□□□ 0.41
ACTN1-209ENST00000553659 E2F4Q16254 413 aa17.64■□□□□ 0.41
ACTN1-209ENST00000553659 B3GNT9Q6UX72 402 aa17.64■□□□□ 0.41
ACTN1-209ENST00000553659 DRC7Q8IY82 874 aa17.64■□□□□ 0.41
ACTN1-209ENST00000553659 VPS52Q8N1B4 723 aa17.64■□□□□ 0.41
ACTN1-209ENST00000553659 ERCC4Q92889 916 aaPredicted RBP17.64■□□□□ 0.41
ACTN1-209ENST00000553659 FDXACB1Q9BRP7 624 aaPredicted RBP17.64■□□□□ 0.41
ACTN1-209ENST00000553659 IRF2BPLQ9H1B7 796 aa17.64■□□□□ 0.41
ACTN1-209ENST00000553659 POMKQ9H5K3 350 aa17.64■□□□□ 0.41
ACTN1-209ENST00000553659 RRAGDQ9NQL2 400 aaPredicted RBP17.64■□□□□ 0.41
ACTN1-209ENST00000553659 CDH22Q9UJ99 828 aa17.64■□□□□ 0.41
ACTN1-209ENST00000553659 AP5Z1O43299 807 aa17.63■□□□□ 0.41
ACTN1-209ENST00000553659 SFPQP23246 707 aaKnown RBP eCLIP17.63■□□□□ 0.417e-7■■■■□ 21
ACTN1-209ENST00000553659 CA8P35219 290 aa17.63■□□□□ 0.41
ACTN1-209ENST00000553659 MTHFRP42898 656 aa17.63■□□□□ 0.41
ACTN1-209ENST00000553659 POLGP54098 1239 aaPredicted RBP17.63■□□□□ 0.41
ACTN1-209ENST00000553659 GIT2Q14161 759 aa17.63■□□□□ 0.41
ACTN1-209ENST00000553659 TWF2Q6IBS0 349 aaKnown RBP17.63■□□□□ 0.41
ACTN1-209ENST00000553659 MOXD1Q6UVY6 613 aa17.63■□□□□ 0.41
ACTN1-209ENST00000553659 USP49Q70CQ1 688 aa17.63■□□□□ 0.41
ACTN1-209ENST00000553659 DDX53Q86TM3 631 aaKnown RBP17.63■□□□□ 0.41
ACTN1-209ENST00000553659 ZNF410Q86VK4 478 aa17.63■□□□□ 0.41
ACTN1-209ENST00000553659 UBALD2Q8IYN6 164 aa17.63■□□□□ 0.41
ACTN1-209ENST00000553659 KREMEN2Q8NCW0 462 aa17.63■□□□□ 0.41
ACTN1-209ENST00000553659 ENOX1Q8TC92 643 aaKnown RBP17.63■□□□□ 0.41
ACTN1-209ENST00000553659 SUCLA2Q9P2R7 463 aaPredicted RBP17.63■□□□□ 0.41
ACTN1-209ENST00000553659 IRAK3Q9Y616 596 aa17.63■□□□□ 0.41
ACTN1-209ENST00000553659 TMEM150BA6NC51 233 aa17.62■□□□□ 0.41
ACTN1-209ENST00000553659 C2CD4DB7Z1M9 353 aa17.62■□□□□ 0.41
ACTN1-209ENST00000553659 ZNF623O75123 536 aa17.62■□□□□ 0.41
ACTN1-209ENST00000553659 ZC3H11AO75152 810 aaKnown RBP eCLIP17.62■□□□□ 0.41
ACTN1-209ENST00000553659 MAFO75444 373 aaPredicted RBP17.62■□□□□ 0.41
ACTN1-209ENST00000553659 TDP2O95551 362 aa17.62■□□□□ 0.41
ACTN1-209ENST00000553659 CTSAP10619 480 aa17.62■□□□□ 0.41
ACTN1-209ENST00000553659 STAT6P42226 847 aa17.62■□□□□ 0.41
ACTN1-209ENST00000553659 FXR2P51116 673 aaKnown RBP eCLIP17.62■□□□□ 0.41
ACTN1-209ENST00000553659 NUBP1P53384 320 aa17.62■□□□□ 0.41
ACTN1-209ENST00000553659 DPYDQ12882 1025 aa17.62■□□□□ 0.41
ACTN1-209ENST00000553659 RRAGBQ5VZM2 374 aa17.62■□□□□ 0.41
ACTN1-209ENST00000553659 RHPN2Q8IUC4 686 aa17.62■□□□□ 0.41
ACTN1-209ENST00000553659 RASSF8Q8NHQ8 419 aa17.62■□□□□ 0.41
ACTN1-209ENST00000553659 LPPQ93052 612 aa17.62■□□□□ 0.41
ACTN1-209ENST00000553659 IGSF21Q96ID5 467 aa17.62■□□□□ 0.41
ACTN1-209ENST00000553659 MBOAT7Q96N66 472 aa17.62■□□□□ 0.41
ACTN1-209ENST00000553659 SH2D3AQ9BRG2 576 aa17.62■□□□□ 0.41
ACTN1-209ENST00000553659 ZBP1Q9H171 429 aa17.62■□□□□ 0.41
ACTN1-209ENST00000553659 NRDE2Q9H7Z3 1164 aa17.62■□□□□ 0.41
ACTN1-209ENST00000553659 FAM105AQ9NUU6 356 aa17.62■□□□□ 0.41
ACTN1-209ENST00000553659 IMPACTQ9P2X3 320 aa17.62■□□□□ 0.41
ACTN1-209ENST00000553659 SORCS3Q9UPU3 1222 aa17.62■□□□□ 0.41
ACTN1-209ENST00000553659 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP17.61■□□□□ 0.41
ACTN1-209ENST00000553659 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.61■□□□□ 0.41
ACTN1-209ENST00000553659 PDGFBP01127 241 aaPredicted RBP17.61■□□□□ 0.41
ACTN1-209ENST00000553659 GALTP07902 379 aa17.61■□□□□ 0.41
ACTN1-209ENST00000553659 RAB27AP51159 221 aa17.61■□□□□ 0.41
ACTN1-209ENST00000553659 PSMC5P62195 406 aa17.61■□□□□ 0.41
ACTN1-209ENST00000553659 MTMR3Q13615 1198 aa17.61■□□□□ 0.41
ACTN1-209ENST00000553659 PDIA5Q14554 519 aa17.61■□□□□ 0.41
ACTN1-209ENST00000553659 NCAPHQ15003 741 aa17.61■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms