RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 EPC1Q9H2F5 836 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 C11orf16Q9NQ32 467 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 GDF2Q9UK05 429 aaPredicted RBP4.35□□□□□ -1.71
RDH11-204ENST00000553578 TMCC3Q9ULS5 477 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 ERICH2A1L162 156 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 PDGFAP04085 211 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 A1BGP04217 495 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 CTSHP09668 335 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 KRT10P13645 584 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 ENPP1P22413 925 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 AMPD1P23109 780 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 RPS6KB1P23443 525 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 NFKBIAP25963 317 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 ECI1P42126 302 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 ARHGAP25P42331 645 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 KAZNQ674X7 775 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 MSL1Q68DK7 614 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 FAM180BQ6P0A1 224 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 DNAJC10Q8IXB1 793 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 CCDC170Q8IYT3 715 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 SLC7A5P1Q8MH63 180 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 BCAS4Q8TDM0 211 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 NSUN6Q8TEA1 469 aaKnown RBP4.35□□□□□ -1.71
RDH11-204ENST00000553578 ANKS1AQ92625 1134 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 MAP3K14Q99558 947 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 CARD6Q9BX69 1037 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 ZNF700Q9H0M5 742 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 TUBA8Q9NY65 449 aaPredicted RBP4.35□□□□□ -1.71
RDH11-204ENST00000553578 EPS15L1Q9UBC2 864 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 FBXL21Q9UKT6 434 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 SNX5Q9Y5X3 404 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 PLIN4Q96Q06 1357 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 HMX3A6NHT5 357 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 PLSCR1O15162 318 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 AKR1B10O60218 316 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 TROVE2P10155 538 aaKnown RBP eCLIP4.35□□□□□ -1.71
RDH11-204ENST00000553578 RPL13P26373 211 aaKnown RBP4.35□□□□□ -1.71
RDH11-204ENST00000553578 ADSLP30566 484 aaPredicted RBP4.35□□□□□ -1.71
RDH11-204ENST00000553578 KIF5BP33176 963 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 MLH1P40692 756 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 TSPAN7P41732 249 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 CTCFP49711 727 aaPredicted RBP4.35□□□□□ -1.71
RDH11-204ENST00000553578 PDE6CP51160 858 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 RNASE9P60153 205 aaKnown RBP4.35□□□□□ -1.71
RDH11-204ENST00000553578 TFCP2Q12800 502 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 SQSTM1Q13501 440 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 LAMC2Q13753 1193 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 GRM3Q14832 879 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 LONRF2Q1L5Z9 754 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 LRRFIP1Q32MZ4 808 aaKnown RBP4.35□□□□□ -1.71
RDH11-204ENST00000553578 CCDC183Q5T5S1 534 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 WLSQ5T9L3 541 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 CREB3L3Q68CJ9 461 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 RIN3Q8TB24 985 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 DDX54Q8TDD1 881 aaKnown RBP4.35□□□□□ -1.71
RDH11-204ENST00000553578 RILPL2Q969X0 211 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 YME1L1Q96TA2 773 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 MKRN2Q9H000 416 aaKnown RBP4.35□□□□□ -1.71
RDH11-204ENST00000553578 TNKS2Q9H2K2 1166 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 ELP3Q9H9T3 547 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 AVENQ9NQS1 362 aaPredicted RBP4.35□□□□□ -1.71
RDH11-204ENST00000553578 LATS2Q9NRM7 1088 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 TLR7Q9NYK1 1049 aaKnown RBP4.35□□□□□ -1.71
RDH11-204ENST00000553578 DKK3Q9UBP4 350 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 BAIAP2L1Q9UHR4 511 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 CROTQ9UKG9 612 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 LIMCH1Q9UPQ0 1083 aa4.35□□□□□ -1.71
RDH11-204ENST00000553578 STK36Q9NRP7 1315 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 MYH2Q9UKX2 1941 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 TGFBR3LH3BV60 316 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 KDM1AO60341 852 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 FZD6O60353 706 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 UQCRFS1P1P0C7P4 283 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 PLCG1P19174 1290 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 BTF3P20290 206 aaKnown RBP4.34□□□□□ -1.71
RDH11-204ENST00000553578 PSMA5P28066 241 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 GSTT1P30711 240 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 CRKLP46109 303 aaKnown RBP4.34□□□□□ -1.71
RDH11-204ENST00000553578 ZNF165P49910 485 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 FKBP1AP62942 108 aaKnown RBP4.34□□□□□ -1.71
RDH11-204ENST00000553578 PTH1RQ03431 593 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 TNP2Q05952 138 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 PDE4BQ07343 736 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 EIF2B5Q13144 721 aaKnown RBP4.34□□□□□ -1.71
RDH11-204ENST00000553578 PIN1Q13526 163 aaPredicted RBP4.34□□□□□ -1.71
RDH11-204ENST00000553578 MAP7Q14244 749 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 DDB1Q16531 1140 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 HLFQ16534 295 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 RILPL1Q5EBL4 403 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 FAM209AQ5JX71 171 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 CCDC158Q5M9N0 1113 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 SPOUT1Q5T280 376 aaKnown RBP4.34□□□□□ -1.71
RDH11-204ENST00000553578 PIK3R6Q5UE93 754 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 YOD1Q5VVQ6 348 aaPredicted RBP4.34□□□□□ -1.71
RDH11-204ENST00000553578 MIS18BP1Q6P0N0 1132 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 XRRA1Q6P2D8 792 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 HDXQ7Z353 690 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 SGMS1Q86VZ5 419 aa4.34□□□□□ -1.71
RDH11-204ENST00000553578 CISD2Q8N5K1 135 aaKnown RBP4.34□□□□□ -1.71
RDH11-204ENST00000553578 ATG16L2Q8NAA4 619 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms